EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005662 (Gene tree)
Gene ID: 109516441
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 32514 bases
Position: chrKV879957.1:479404-511917
Accession: 109516441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004242	Fox-1_C	PF12414.8	1.7e-37	1	1
ENSHCOP00000020000	Fox-1_C	PF12414.8	3.1e-35	1	1
ENSHCOP00000020000	RRM_1	PF00076.22	3.3e-18	1	1
ENSHCOP00000004242	RRM_1	PF00076.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007374	-	4711	XM_019870979	ENSHCOP00000004242	448 (aa)	XP_019726538	UPI00094EE925
ENSHCOT00000007367	-	4711	XM_019870980	ENSHCOP00000020000	448 (aa)	XP_019726539	-

Gene Model

Click here to download ENSHCOG00000005662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005662	-	65	56.207	ENSHCOG00000007444	RBFOX3	64	56.207
ENSHCOG00000005662	-	59	64.286	ENSHCOG00000020771	rbfox1l	66	63.100
ENSHCOG00000005662	-	70	55.556	ENSHCOG00000016419	rbfox1	88	53.846
ENSHCOG00000005662	-	72	49.857	ENSHCOG00000001863	RBFOX3	89	49.853
ENSHCOG00000005662	-	100	69.280	ENSHCOG00000016102	rbfox2	100	69.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005662	-	94	55.439	ENSG00000100320	RBFOX2	99	60.938	Homo_sapiens
ENSHCOG00000005662	-	100	87.124	ENSAPOG00000021561	-	100	87.339	Acanthochromis_polyacanthus
ENSHCOG00000005662	-	100	69.915	ENSAPOG00000004877	rbfox2	100	70.426	Acanthochromis_polyacanthus
ENSHCOG00000005662	-	63	66.667	ENSAMEG00000007228	RBFOX2	94	67.101	Ailuropoda_melanoleuca
ENSHCOG00000005662	-	52	69.915	ENSACIG00000001690	rbfox2	90	66.538	Amphilophus_citrinellus
ENSHCOG00000005662	-	100	69.492	ENSAOCG00000013752	rbfox2	100	69.280	Amphiprion_ocellaris
ENSHCOG00000005662	-	100	85.622	ENSAOCG00000015358	-	100	85.837	Amphiprion_ocellaris
ENSHCOG00000005662	-	100	85.622	ENSAPEG00000013905	-	100	85.837	Amphiprion_percula
ENSHCOG00000005662	-	100	69.492	ENSAPEG00000022359	rbfox2	100	69.574	Amphiprion_percula
ENSHCOG00000005662	-	100	68.790	ENSATEG00000021951	rbfox2	100	69.083	Anabas_testudineus
ENSHCOG00000005662	-	100	86.052	ENSATEG00000009959	-	100	86.266	Anabas_testudineus
ENSHCOG00000005662	-	67	64.865	ENSAPLG00000007609	RBFOX2	73	67.327	Anas_platyrhynchos
ENSHCOG00000005662	-	94	55.136	ENSACAG00000016535	RBFOX2	97	54.088	Anolis_carolinensis
ENSHCOG00000005662	-	66	65.653	ENSANAG00000015245	RBFOX2	91	67.657	Aotus_nancymaae
ENSHCOG00000005662	-	100	69.427	ENSACLG00000009744	rbfox2	100	69.510	Astatotilapia_calliptera
ENSHCOG00000005662	-	100	86.481	ENSACLG00000017380	-	100	86.266	Astatotilapia_calliptera
ENSHCOG00000005662	-	100	69.556	ENSAMXG00000011451	rbfox2	100	68.288	Astyanax_mexicanus
ENSHCOG00000005662	-	91	55.864	ENSBTAG00000020125	RBFOX2	96	54.487	Bos_taurus
ENSHCOG00000005662	-	71	60.647	ENSCJAG00000038886	-	71	67.327	Callithrix_jacchus
ENSHCOG00000005662	-	91	56.410	ENSCJAG00000019456	-	96	54.487	Callithrix_jacchus
ENSHCOG00000005662	-	65	66.154	ENSCAFG00000001701	RBFOX2	73	67.327	Canis_familiaris
ENSHCOG00000005662	-	91	49.567	ENSCAFG00020004541	RBFOX2	96	47.722	Canis_lupus_dingo
ENSHCOG00000005662	-	91	55.983	ENSCHIG00000014027	RBFOX2	96	55.072	Capra_hircus
ENSHCOG00000005662	-	81	59.145	ENSTSYG00000014123	RBFOX2	100	57.245	Carlito_syrichta
ENSHCOG00000005662	-	60	66.904	ENSCAPG00000014308	RBFOX2	68	64.444	Cavia_aperea
ENSHCOG00000005662	-	68	63.422	ENSCPOG00000022180	RBFOX2	72	67.327	Cavia_porcellus
ENSHCOG00000005662	-	91	56.503	ENSCCAG00000036584	RBFOX2	96	54.584	Cebus_capucinus
ENSHCOG00000005662	-	91	54.329	ENSCATG00000038655	RBFOX2	97	55.156	Cercocebus_atys
ENSHCOG00000005662	-	63	64.650	ENSCLAG00000017106	RBFOX2	74	64.686	Chinchilla_lanigera
ENSHCOG00000005662	-	64	56.891	ENSCSAG00000008110	RBFOX2	88	54.839	Chlorocebus_sabaeus
ENSHCOG00000005662	-	64	54.412	ENSCHOG00000002887	RBFOX2	100	53.824	Choloepus_hoffmanni
ENSHCOG00000005662	-	70	62.931	ENSCPBG00000023144	RBFOX2	77	67.327	Chrysemys_picta_bellii
ENSHCOG00000005662	-	81	58.950	ENSCANG00000035832	RBFOX2	100	57.007	Colobus_angolensis_palliatus
ENSHCOG00000005662	-	91	55.769	ENSCGRG00001017727	Rbfox2	97	54.390	Cricetulus_griseus_chok1gshd
ENSHCOG00000005662	-	65	65.854	ENSCGRG00000014237	Rbfox2	73	66.775	Cricetulus_griseus_crigri
ENSHCOG00000005662	-	100	65.663	ENSCSEG00000007748	rbfox2	100	65.261	Cynoglossus_semilaevis
ENSHCOG00000005662	-	100	82.292	ENSCSEG00000007360	-	100	82.917	Cynoglossus_semilaevis
ENSHCOG00000005662	-	51	78.017	ENSCVAG00000004491	rbfox2	100	78.355	Cyprinodon_variegatus
ENSHCOG00000005662	-	77	73.641	ENSCVAG00000016503	-	98	74.185	Cyprinodon_variegatus
ENSHCOG00000005662	-	54	76.800	ENSDARG00000052182	rbfox2	100	78.000	Danio_rerio
ENSHCOG00000005662	-	65	66.154	ENSDNOG00000004372	RBFOX2	70	67.327	Dasypus_novemcinctus
ENSHCOG00000005662	-	65	61.420	ENSDORG00000015003	Rbfox2	76	62.376	Dipodomys_ordii
ENSHCOG00000005662	-	71	72.789	ENSETEG00000005638	RBFOX2	83	68.707	Echinops_telfairi
ENSHCOG00000005662	-	91	56.317	ENSEASG00005018920	RBFOX2	96	54.818	Equus_asinus_asinus
ENSHCOG00000005662	-	91	56.317	ENSECAG00000018923	RBFOX2	96	54.818	Equus_caballus
ENSHCOG00000005662	-	78	52.723	ENSEEUG00000004549	RBFOX2	100	50.743	Erinaceus_europaeus
ENSHCOG00000005662	-	100	73.022	ENSELUG00000009404	-	100	73.824	Esox_lucius
ENSHCOG00000005662	-	54	73.469	ENSELUG00000000102	rbfox2	100	73.469	Esox_lucius
ENSHCOG00000005662	-	91	55.508	ENSFCAG00000010061	RBFOX2	96	54.565	Felis_catus
ENSHCOG00000005662	-	70	62.931	ENSFALG00000013111	RBFOX2	72	67.327	Ficedula_albicollis
ENSHCOG00000005662	-	100	71.215	ENSFHEG00000010546	rbfox2	100	71.520	Fundulus_heteroclitus
ENSHCOG00000005662	-	77	58.747	ENSGMOG00000005278	rbfox2	73	65.411	Gadus_morhua
ENSHCOG00000005662	-	53	57.037	ENSGALG00000012540	RBFOX2	57	63.556	Gallus_gallus
ENSHCOG00000005662	-	51	65.447	ENSGAFG00000017428	-	95	66.667	Gambusia_affinis
ENSHCOG00000005662	-	51	78.355	ENSGAFG00000008448	rbfox2	100	78.696	Gambusia_affinis
ENSHCOG00000005662	-	77	67.609	ENSGACG00000007174	-	98	67.959	Gasterosteus_aculeatus
ENSHCOG00000005662	-	77	61.990	ENSGACG00000015968	rbfox2	98	61.382	Gasterosteus_aculeatus
ENSHCOG00000005662	-	70	62.931	ENSGAGG00000025884	RBFOX2	73	67.327	Gopherus_agassizii
ENSHCOG00000005662	-	91	55.794	ENSGGOG00000037332	RBFOX2	96	54.352	Gorilla_gorilla
ENSHCOG00000005662	-	100	86.882	ENSHBUG00000000856	-	100	86.667	Haplochromis_burtoni
ENSHCOG00000005662	-	100	69.427	ENSHBUG00000004356	rbfox2	100	69.510	Haplochromis_burtoni
ENSHCOG00000005662	-	94	53.361	ENSHGLG00000012907	RBFOX2	99	55.635	Heterocephalus_glaber_female
ENSHCOG00000005662	-	63	66.667	ENSHGLG00100009986	RBFOX2	73	67.101	Heterocephalus_glaber_male
ENSHCOG00000005662	-	100	67.155	ENSIPUG00000016896	rbfox2	100	65.690	Ictalurus_punctatus
ENSHCOG00000005662	-	65	63.889	ENSSTOG00000014841	RBFOX2	73	64.686	Ictidomys_tridecemlineatus
ENSHCOG00000005662	-	65	64.798	ENSJJAG00000014885	Rbfox2	73	65.667	Jaculus_jaculus
ENSHCOG00000005662	-	100	68.856	ENSKMAG00000021880	-	100	70.236	Kryptolebias_marmoratus
ENSHCOG00000005662	-	100	84.402	ENSKMAG00000013354	-	100	85.043	Kryptolebias_marmoratus
ENSHCOG00000005662	-	70	57.790	ENSLACG00000003339	RBFOX2	84	56.941	Latimeria_chalumnae
ENSHCOG00000005662	-	65	64.329	ENSLAFG00000027140	RBFOX2	75	65.472	Loxodonta_africana
ENSHCOG00000005662	-	91	54.329	ENSMFAG00000031994	RBFOX2	96	57.314	Macaca_fascicularis
ENSHCOG00000005662	-	65	66.358	ENSMMUG00000014010	RBFOX2	77	67.327	Macaca_mulatta
ENSHCOG00000005662	-	91	54.077	ENSMNEG00000034388	RBFOX2	97	54.869	Macaca_nemestrina
ENSHCOG00000005662	-	81	58.950	ENSMLEG00000005854	RBFOX2	100	57.007	Mandrillus_leucophaeus
ENSHCOG00000005662	-	100	81.799	ENSMAMG00000008980	-	100	83.298	Mastacembelus_armatus
ENSHCOG00000005662	-	100	69.767	ENSMAMG00000004293	rbfox2	100	70.426	Mastacembelus_armatus
ENSHCOG00000005662	-	100	86.481	ENSMZEG00005004959	-	100	86.266	Maylandia_zebra
ENSHCOG00000005662	-	100	68.936	ENSMZEG00005023838	rbfox2	100	69.017	Maylandia_zebra
ENSHCOG00000005662	-	77	57.606	ENSMAUG00000018816	Rbfox2	73	64.686	Mesocricetus_auratus
ENSHCOG00000005662	-	58	45.484	ENSMICG00000046341	-	50	53.023	Microcebus_murinus
ENSHCOG00000005662	-	94	55.000	ENSMICG00000035417	RBFOX2	99	53.958	Microcebus_murinus
ENSHCOG00000005662	-	65	63.889	ENSMOCG00000009327	Rbfox2	73	64.686	Microtus_ochrogaster
ENSHCOG00000005662	-	54	69.262	ENSMMOG00000008287	rbfox2	100	70.082	Mola_mola
ENSHCOG00000005662	-	68	61.127	ENSMODG00000001122	RBFOX2	76	64.669	Monodelphis_domestica
ENSHCOG00000005662	-	54	80.488	ENSMALG00000000623	rbfox2	100	81.633	Monopterus_albus
ENSHCOG00000005662	-	91	55.388	MGP_CAROLIEiJ_G0019957	Rbfox2	96	54.390	Mus_caroli
ENSHCOG00000005662	-	91	55.128	ENSMUSG00000033565	Rbfox2	96	54.140	Mus_musculus
ENSHCOG00000005662	-	91	55.172	MGP_PahariEiJ_G0019967	Rbfox2	96	54.292	Mus_pahari
ENSHCOG00000005662	-	91	55.388	MGP_SPRETEiJ_G0020860	Rbfox2	96	54.390	Mus_spretus
ENSHCOG00000005662	-	81	58.195	ENSMPUG00000012555	RBFOX2	97	57.007	Mustela_putorius_furo
ENSHCOG00000005662	-	81	56.563	ENSMLUG00000002676	RBFOX2	98	56.368	Myotis_lucifugus
ENSHCOG00000005662	-	65	63.580	ENSNGAG00000020528	Rbfox2	73	64.686	Nannospalax_galili
ENSHCOG00000005662	-	83	84.910	ENSNBRG00000001568	-	90	84.399	Neolamprologus_brichardi
ENSHCOG00000005662	-	100	69.280	ENSNBRG00000018155	rbfox2	100	69.149	Neolamprologus_brichardi
ENSHCOG00000005662	-	85	57.208	ENSNLEG00000034979	RBFOX2	100	55.125	Nomascus_leucogenys
ENSHCOG00000005662	-	81	55.476	ENSMEUG00000001547	RBFOX2	100	53.810	Notamacropus_eugenii
ENSHCOG00000005662	-	83	76.289	ENSOPRG00000014878	RBFOX2	82	72.165	Ochotona_princeps
ENSHCOG00000005662	-	91	55.365	ENSODEG00000009937	RBFOX2	96	53.105	Octodon_degus
ENSHCOG00000005662	-	77	76.826	ENSONIG00000008341	-	99	75.306	Oreochromis_niloticus
ENSHCOG00000005662	-	81	60.427	ENSONIG00000017998	rbfox2	99	59.857	Oreochromis_niloticus
ENSHCOG00000005662	-	81	51.429	ENSOCUG00000001349	RBFOX2	97	48.926	Oryctolagus_cuniculus
ENSHCOG00000005662	-	100	68.803	ENSORLG00000028082	rbfox2	100	69.658	Oryzias_latipes
ENSHCOG00000005662	-	100	84.731	ENSORLG00000014948	-	100	85.161	Oryzias_latipes
ENSHCOG00000005662	-	100	68.803	ENSORLG00020008976	rbfox2	100	69.658	Oryzias_latipes_hni
ENSHCOG00000005662	-	100	84.516	ENSORLG00020005676	-	100	85.161	Oryzias_latipes_hni
ENSHCOG00000005662	-	100	84.731	ENSORLG00015000797	-	100	85.376	Oryzias_latipes_hsok
ENSHCOG00000005662	-	100	68.803	ENSORLG00015007027	rbfox2	100	69.658	Oryzias_latipes_hsok
ENSHCOG00000005662	-	100	69.296	ENSOMEG00000015966	rbfox2	100	69.510	Oryzias_melastigma
ENSHCOG00000005662	-	100	85.806	ENSOMEG00000007909	-	100	86.667	Oryzias_melastigma
ENSHCOG00000005662	-	65	65.653	ENSOGAG00000033250	RBFOX2	74	66.775	Otolemur_garnettii
ENSHCOG00000005662	-	65	64.832	ENSOARG00000018669	RBFOX2	73	65.902	Ovis_aries
ENSHCOG00000005662	-	81	58.768	ENSPPAG00000035653	RBFOX2	98	56.604	Pan_paniscus
ENSHCOG00000005662	-	91	55.508	ENSPPRG00000015635	RBFOX2	96	54.565	Panthera_pardus
ENSHCOG00000005662	-	65	65.854	ENSPTIG00000019147	RBFOX2	74	66.775	Panthera_tigris_altaica
ENSHCOG00000005662	-	91	55.794	ENSPTRG00000014305	RBFOX2	96	54.352	Pan_troglodytes
ENSHCOG00000005662	-	91	56.223	ENSPANG00000007030	RBFOX2	97	54.869	Papio_anubis
ENSHCOG00000005662	-	100	63.812	ENSPKIG00000006854	-	100	63.966	Paramormyrops_kingsleyae
ENSHCOG00000005662	-	59	64.846	ENSPKIG00000010816	-	73	65.986	Paramormyrops_kingsleyae
ENSHCOG00000005662	-	60	68.977	ENSPSIG00000017828	RBFOX2	73	67.327	Pelodiscus_sinensis
ENSHCOG00000005662	-	54	77.236	ENSPMGG00000007138	rbfox2	100	77.551	Periophthalmus_magnuspinnatus
ENSHCOG00000005662	-	61	81.754	ENSPMGG00000016969	-	87	81.754	Periophthalmus_magnuspinnatus
ENSHCOG00000005662	-	65	63.889	ENSPEMG00000012542	Rbfox2	73	64.686	Peromyscus_maniculatus_bairdii
ENSHCOG00000005662	-	81	58.513	ENSPCIG00000021550	RBFOX2	94	56.835	Phascolarctos_cinereus
ENSHCOG00000005662	-	69	84.830	ENSPFOG00000001869	-	100	85.449	Poecilia_formosa
ENSHCOG00000005662	-	100	68.763	ENSPFOG00000014209	rbfox2	100	70.940	Poecilia_formosa
ENSHCOG00000005662	-	54	77.459	ENSPLAG00000017308	rbfox2	100	78.049	Poecilia_latipinna
ENSHCOG00000005662	-	54	92.946	ENSPLAG00000002710	-	100	93.776	Poecilia_latipinna
ENSHCOG00000005662	-	54	79.268	ENSPMEG00000007320	rbfox2	100	80.408	Poecilia_mexicana
ENSHCOG00000005662	-	54	93.361	ENSPMEG00000013663	-	100	94.191	Poecilia_mexicana
ENSHCOG00000005662	-	54	76.829	ENSPREG00000012955	rbfox2	100	77.959	Poecilia_reticulata
ENSHCOG00000005662	-	91	55.794	ENSPPYG00000011766	RBFOX2	96	54.352	Pongo_abelii
ENSHCOG00000005662	-	65	61.728	ENSPCOG00000016273	RBFOX2	73	62.376	Propithecus_coquereli
ENSHCOG00000005662	-	52	65.568	ENSPVAG00000015844	RBFOX2	66	64.103	Pteropus_vampyrus
ENSHCOG00000005662	-	100	86.882	ENSPNYG00000020595	-	100	86.882	Pundamilia_nyererei
ENSHCOG00000005662	-	100	69.492	ENSPNYG00000016161	rbfox2	100	70.213	Pundamilia_nyererei
ENSHCOG00000005662	-	100	63.214	ENSPNAG00000000168	rbfox2	100	63.002	Pygocentrus_nattereri
ENSHCOG00000005662	-	99	59.149	ENSPNAG00000014196	-	100	59.315	Pygocentrus_nattereri
ENSHCOG00000005662	-	81	56.595	ENSRNOG00000004688	Rbfox2	97	55.156	Rattus_norvegicus
ENSHCOG00000005662	-	65	66.154	ENSRBIG00000033696	RBFOX2	73	67.327	Rhinopithecus_bieti
ENSHCOG00000005662	-	91	55.794	ENSRROG00000035715	RBFOX2	96	54.352	Rhinopithecus_roxellana
ENSHCOG00000005662	-	82	58.711	ENSSBOG00000028291	RBFOX2	99	57.041	Saimiri_boliviensis_boliviensis
ENSHCOG00000005662	-	81	58.513	ENSSHAG00000006835	RBFOX2	97	56.835	Sarcophilus_harrisii
ENSHCOG00000005662	-	100	63.312	ENSSFOG00015010482	-	97	70.933	Scleropages_formosus
ENSHCOG00000005662	-	100	69.427	ENSSMAG00000013662	rbfox2	100	69.296	Scophthalmus_maximus
ENSHCOG00000005662	-	100	85.011	ENSSMAG00000004317	-	100	85.011	Scophthalmus_maximus
ENSHCOG00000005662	-	100	70.913	ENSSDUG00000004292	rbfox2	100	71.125	Seriola_dumerili
ENSHCOG00000005662	-	100	86.910	ENSSDUG00000009511	-	100	86.910	Seriola_dumerili
ENSHCOG00000005662	-	85	70.927	ENSSLDG00000023983	rbfox2	84	70.380	Seriola_lalandi_dorsalis
ENSHCOG00000005662	-	100	86.695	ENSSLDG00000018052	-	100	86.695	Seriola_lalandi_dorsalis
ENSHCOG00000005662	-	53	58.209	ENSSPUG00000011797	RBFOX2	69	57.463	Sphenodon_punctatus
ENSHCOG00000005662	-	100	86.910	ENSSPAG00000016272	-	100	87.124	Stegastes_partitus
ENSHCOG00000005662	-	100	69.492	ENSSPAG00000013681	rbfox2	100	69.787	Stegastes_partitus
ENSHCOG00000005662	-	81	58.413	ENSSSCG00000000152	RBFOX2	96	56.250	Sus_scrofa
ENSHCOG00000005662	-	70	62.931	ENSTGUG00000010808	RBFOX2	75	67.327	Taeniopygia_guttata
ENSHCOG00000005662	-	78	68.901	ENSTRUG00000007739	-	96	68.097	Takifugu_rubripes
ENSHCOG00000005662	-	56	81.081	ENSTBEG00000003297	-	58	88.000	Tupaia_belangeri
ENSHCOG00000005662	-	81	58.432	ENSTTRG00000006922	RBFOX2	100	57.007	Tursiops_truncatus
ENSHCOG00000005662	-	62	64.353	ENSUAMG00000010612	RBFOX2	70	65.541	Ursus_americanus
ENSHCOG00000005662	-	81	53.444	ENSVPAG00000002824	RBFOX2	100	52.969	Vicugna_pacos
ENSHCOG00000005662	-	82	58.234	ENSVVUG00000023561	RBFOX2	98	56.325	Vulpes_vulpes
ENSHCOG00000005662	-	69	62.824	ENSXETG00000000231	rbfox2	86	60.519	Xenopus_tropicalis
ENSHCOG00000005662	-	56	97.674	ENSXCOG00000015905	-	97	65.819	Xiphophorus_couchianus
ENSHCOG00000005662	-	50	71.930	ENSXCOG00000013643	rbfox2	100	73.128	Xiphophorus_couchianus
ENSHCOG00000005662	-	77	70.765	ENSXMAG00000029498	rbfox2	90	71.585	Xiphophorus_maculatus
ENSHCOG00000005662	-	100	82.581	ENSXMAG00000026769	-	100	83.011	Xiphophorus_maculatus