EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005684 (Gene tree)
Gene ID: 109507144
Gene Symbol: -
Alias: -
Full Name: 40S ribosomal protein S11-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 422 bases
Position: chrKV880479.1:9716-10137
Accession: 109507144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004269	Ribosomal_S17	PF00366.20	7.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007330	-	231	XM_019856367	ENSHCOP00000004269	76 (aa)	XP_019711926	UPI00094E30A2

Gene Model

Click here to download ENSHCOG00000005684's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005684	-	84	68.657	ENSHCOG00000016014	-	72	68.657
ENSHCOG00000005684	-	100	100.000	ENSHCOG00000005503	-	100	100.000
ENSHCOG00000005684	-	100	66.667	ENSHCOG00000016035	-	100	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005684	-	51	89.744	ENSEBUG00000014002	-	52	89.744	Eptatretus_burgeri
ENSHCOG00000005684	-	100	55.696	ENSSSCG00000039928	-	100	55.696	Sus_scrofa