EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005747 (Gene tree)
Gene ID: 109523085
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 36689 bases
Position: chrKV880188.1:4508035-4544723
Accession: 109523085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004291	RRM_1	PF00076.22	1.3e-10	1	1
ENSHCOP00000020007	RRM_1	PF00076.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007286	-	3746	XM_019881935	ENSHCOP00000004291	648 (aa)	XP_019737494	UPI00094E40B8
ENSHCOT00000007279	-	3770	XM_019881934	ENSHCOP00000020007	656 (aa)	XP_019737493	UPI00094EDD8F

Gene Model

Click here to download ENSHCOG00000005747's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04114	Oocyte meiosis	KEGG
hcq04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005747	cpeb3	67	73.378	ENSHCOG00000003846	CPEB4	82	60.462
ENSHCOG00000005747	cpeb3	100	54.443	ENSHCOG00000003707	cpeb4a	100	75.616
ENSHCOG00000005747	cpeb3	80	61.053	ENSHCOG00000012069	cpeb2	73	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005747	cpeb3	100	69.522	ENSG00000107864	CPEB3	100	69.774	Homo_sapiens
ENSHCOG00000005747	cpeb3	100	84.706	ENSAPOG00000003625	cpeb3	100	84.242	Acanthochromis_polyacanthus
ENSHCOG00000005747	cpeb3	100	71.720	ENSAMEG00000014204	CPEB3	100	71.574	Ailuropoda_melanoleuca
ENSHCOG00000005747	cpeb3	100	84.683	ENSACIG00000001933	cpeb3	100	84.218	Amphilophus_citrinellus
ENSHCOG00000005747	cpeb3	100	84.978	ENSAOCG00000015423	cpeb3	100	84.513	Amphiprion_ocellaris
ENSHCOG00000005747	cpeb3	100	81.765	ENSATEG00000010649	cpeb3	100	81.591	Anabas_testudineus
ENSHCOG00000005747	cpeb3	100	75.988	ENSACAG00000006335	CPEB3	100	75.994	Anolis_carolinensis
ENSHCOG00000005747	cpeb3	100	71.210	ENSANAG00000037406	CPEB3	100	70.793	Aotus_nancymaae
ENSHCOG00000005747	cpeb3	100	84.242	ENSACLG00000018590	cpeb3	89	83.776	Astatotilapia_calliptera
ENSHCOG00000005747	cpeb3	100	69.307	ENSBTAG00000015450	CPEB3	94	93.046	Bos_taurus
ENSHCOG00000005747	cpeb3	91	75.463	ENSCJAG00000008495	CPEB3	100	70.810	Callithrix_jacchus
ENSHCOG00000005747	cpeb3	100	68.741	ENSCAFG00000007423	CPEB3	100	68.839	Canis_familiaris
ENSHCOG00000005747	cpeb3	100	70.195	ENSCAFG00020001981	CPEB3	92	92.810	Canis_lupus_dingo
ENSHCOG00000005747	cpeb3	100	70.670	ENSCHIG00000017337	CPEB3	100	70.950	Capra_hircus
ENSHCOG00000005747	cpeb3	86	84.941	ENSTSYG00000003928	CPEB3	83	84.988	Carlito_syrichta
ENSHCOG00000005747	cpeb3	100	70.833	ENSCCAG00000033267	CPEB3	100	70.932	Cebus_capucinus
ENSHCOG00000005747	cpeb3	100	70.637	ENSCATG00000038447	CPEB3	100	70.319	Cercocebus_atys
ENSHCOG00000005747	cpeb3	71	85.591	ENSCLAG00000011817	CPEB3	97	84.100	Chinchilla_lanigera
ENSHCOG00000005747	cpeb3	100	68.354	ENSCSAG00000006579	CPEB3	100	68.592	Chlorocebus_sabaeus
ENSHCOG00000005747	cpeb3	57	78.226	ENSCHOG00000000272	-	100	78.226	Choloepus_hoffmanni
ENSHCOG00000005747	cpeb3	100	76.471	ENSCPBG00000023779	CPEB3	100	76.549	Chrysemys_picta_bellii
ENSHCOG00000005747	cpeb3	100	70.694	ENSCANG00000040306	CPEB3	100	70.654	Colobus_angolensis_palliatus
ENSHCOG00000005747	cpeb3	100	70.990	ENSCGRG00001003846	Cpeb3	100	70.950	Cricetulus_griseus_chok1gshd
ENSHCOG00000005747	cpeb3	63	87.229	ENSCGRG00000002839	Cpeb3	100	87.229	Cricetulus_griseus_crigri
ENSHCOG00000005747	cpeb3	91	78.922	ENSCSEG00000008423	cpeb3	100	79.081	Cynoglossus_semilaevis
ENSHCOG00000005747	cpeb3	100	80.030	ENSCVAG00000005998	cpeb3	100	80.781	Cyprinodon_variegatus
ENSHCOG00000005747	cpeb3	100	72.163	ENSDARG00000060103	cpeb3	100	71.710	Danio_rerio
ENSHCOG00000005747	cpeb3	100	66.291	ENSDNOG00000048639	CPEB3	100	66.525	Dasypus_novemcinctus
ENSHCOG00000005747	cpeb3	92	85.053	ENSDORG00000028940	Cpeb3	87	84.874	Dipodomys_ordii
ENSHCOG00000005747	cpeb3	100	65.957	ENSETEG00000000111	CPEB3	100	65.909	Echinops_telfairi
ENSHCOG00000005747	cpeb3	91	63.608	ENSEBUG00000010745	cpeb3	90	58.449	Eptatretus_burgeri
ENSHCOG00000005747	cpeb3	100	71.170	ENSEASG00005011095	CPEB3	100	71.130	Equus_asinus_asinus
ENSHCOG00000005747	cpeb3	100	71.130	ENSECAG00000000077	CPEB3	100	71.369	Equus_caballus
ENSHCOG00000005747	cpeb3	100	82.067	ENSELUG00000019251	cpeb3	100	81.126	Esox_lucius
ENSHCOG00000005747	cpeb3	100	70.810	ENSFCAG00000032380	CPEB3	100	71.049	Felis_catus
ENSHCOG00000005747	cpeb3	100	73.754	ENSFALG00000007952	CPEB3	87	74.118	Ficedula_albicollis
ENSHCOG00000005747	cpeb3	87	87.067	ENSFDAG00000016459	CPEB3	85	87.075	Fukomys_damarensis
ENSHCOG00000005747	cpeb3	100	79.438	ENSFHEG00000021371	cpeb3	100	79.586	Fundulus_heteroclitus
ENSHCOG00000005747	cpeb3	89	79.933	ENSGMOG00000008307	cpeb3	99	79.258	Gadus_morhua
ENSHCOG00000005747	cpeb3	100	75.660	ENSGALG00000006912	CPEB3	100	76.246	Gallus_gallus
ENSHCOG00000005747	cpeb3	99	83.631	ENSGACG00000002944	cpeb3	99	83.631	Gasterosteus_aculeatus
ENSHCOG00000005747	cpeb3	100	76.324	ENSGAGG00000008528	CPEB3	100	76.741	Gopherus_agassizii
ENSHCOG00000005747	cpeb3	100	69.916	ENSGGOG00000016441	CPEB3	100	70.572	Gorilla_gorilla
ENSHCOG00000005747	cpeb3	100	83.923	ENSHBUG00000004097	cpeb3	93	83.900	Haplochromis_burtoni
ENSHCOG00000005747	cpeb3	100	70.694	ENSHGLG00000014022	CPEB3	100	70.932	Heterocephalus_glaber_female
ENSHCOG00000005747	cpeb3	100	71.243	ENSHGLG00100005200	CPEB3	100	71.056	Heterocephalus_glaber_male
ENSHCOG00000005747	cpeb3	100	79.730	ENSIPUG00000018571	cpeb3	100	79.730	Ictalurus_punctatus
ENSHCOG00000005747	cpeb3	100	71.550	ENSSTOG00000028061	CPEB3	100	71.693	Ictidomys_tridecemlineatus
ENSHCOG00000005747	cpeb3	63	87.470	ENSJJAG00000009135	Cpeb3	100	87.470	Jaculus_jaculus
ENSHCOG00000005747	cpeb3	100	84.265	ENSLBEG00000025961	cpeb3	100	84.218	Labrus_bergylta
ENSHCOG00000005747	cpeb3	100	74.887	ENSLACG00000011307	CPEB3	92	75.038	Latimeria_chalumnae
ENSHCOG00000005747	cpeb3	100	77.645	ENSLOCG00000007131	cpeb3	100	77.994	Lepisosteus_oculatus
ENSHCOG00000005747	cpeb3	100	74.443	ENSLAFG00000018716	CPEB3	94	81.857	Loxodonta_africana
ENSHCOG00000005747	cpeb3	100	69.186	ENSMFAG00000025613	CPEB3	100	68.895	Macaca_fascicularis
ENSHCOG00000005747	cpeb3	100	70.833	ENSMMUG00000015050	CPEB3	100	70.236	Macaca_mulatta
ENSHCOG00000005747	cpeb3	100	70.539	ENSMNEG00000045465	CPEB3	100	70.222	Macaca_nemestrina
ENSHCOG00000005747	cpeb3	88	84.941	ENSMLEG00000031794	CPEB3	98	84.988	Mandrillus_leucophaeus
ENSHCOG00000005747	cpeb3	100	84.064	ENSMAMG00000012794	cpeb3	100	83.728	Mastacembelus_armatus
ENSHCOG00000005747	cpeb3	100	84.242	ENSMZEG00005012068	cpeb3	100	83.776	Maylandia_zebra
ENSHCOG00000005747	cpeb3	100	73.715	ENSMGAG00000009148	CPEB3	99	74.227	Meleagris_gallopavo
ENSHCOG00000005747	cpeb3	100	70.499	ENSMAUG00000002789	Cpeb3	100	71.012	Mesocricetus_auratus
ENSHCOG00000005747	cpeb3	100	71.569	ENSMICG00000026866	CPEB3	100	71.388	Microcebus_murinus
ENSHCOG00000005747	cpeb3	100	70.694	ENSMOCG00000016486	Cpeb3	100	70.932	Microtus_ochrogaster
ENSHCOG00000005747	cpeb3	96	80.526	ENSMMOG00000008209	cpeb3	88	79.907	Mola_mola
ENSHCOG00000005747	cpeb3	100	66.171	ENSMODG00000006673	CPEB3	100	66.667	Monodelphis_domestica
ENSHCOG00000005747	cpeb3	100	83.058	ENSMALG00000009305	cpeb3	89	97.993	Monopterus_albus
ENSHCOG00000005747	cpeb3	100	70.637	MGP_CAROLIEiJ_G0022910	Cpeb3	100	87.470	Mus_caroli
ENSHCOG00000005747	cpeb3	100	71.031	ENSMUSG00000039652	Cpeb3	100	87.470	Mus_musculus
ENSHCOG00000005747	cpeb3	100	70.596	MGP_PahariEiJ_G0014405	Cpeb3	100	87.470	Mus_pahari
ENSHCOG00000005747	cpeb3	100	70.596	MGP_SPRETEiJ_G0023829	Cpeb3	100	87.470	Mus_spretus
ENSHCOG00000005747	cpeb3	100	68.671	ENSMPUG00000017227	CPEB3	100	68.908	Mustela_putorius_furo
ENSHCOG00000005747	cpeb3	100	71.529	ENSNGAG00000015621	Cpeb3	100	71.108	Nannospalax_galili
ENSHCOG00000005747	cpeb3	100	80.119	ENSNBRG00000018343	cpeb3	91	80.267	Neolamprologus_brichardi
ENSHCOG00000005747	cpeb3	100	70.654	ENSNLEG00000012600	CPEB3	100	71.170	Nomascus_leucogenys
ENSHCOG00000005747	cpeb3	79	83.602	ENSMEUG00000009948	-	75	83.602	Notamacropus_eugenii
ENSHCOG00000005747	cpeb3	92	75.617	ENSODEG00000004591	CPEB3	100	69.368	Octodon_degus
ENSHCOG00000005747	cpeb3	50	92.121	ENSOANG00000015723	-	100	92.121	Ornithorhynchus_anatinus
ENSHCOG00000005747	cpeb3	100	70.868	ENSOCUG00000010454	CPEB3	100	71.008	Oryctolagus_cuniculus
ENSHCOG00000005747	cpeb3	100	78.287	ENSORLG00000000726	cpeb3	100	78.287	Oryzias_latipes
ENSHCOG00000005747	cpeb3	100	78.485	ENSORLG00020004475	cpeb3	100	78.788	Oryzias_latipes_hni
ENSHCOG00000005747	cpeb3	100	80.887	ENSORLG00015011683	cpeb3	100	81.193	Oryzias_latipes_hsok
ENSHCOG00000005747	cpeb3	100	77.424	ENSOMEG00000018265	cpeb3	93	78.030	Oryzias_melastigma
ENSHCOG00000005747	cpeb3	100	68.688	ENSOGAG00000002002	CPEB3	100	68.644	Otolemur_garnettii
ENSHCOG00000005747	cpeb3	100	68.511	ENSOARG00000016671	CPEB3	100	68.794	Ovis_aries
ENSHCOG00000005747	cpeb3	71	83.084	ENSPPAG00000031528	CPEB3	79	80.992	Pan_paniscus
ENSHCOG00000005747	cpeb3	100	68.555	ENSPPRG00000015654	CPEB3	100	68.794	Panthera_pardus
ENSHCOG00000005747	cpeb3	67	84.910	ENSPTIG00000012018	CPEB3	97	94.138	Panthera_tigris_altaica
ENSHCOG00000005747	cpeb3	100	70.874	ENSPTRG00000002753	CPEB3	100	70.851	Pan_troglodytes
ENSHCOG00000005747	cpeb3	100	69.688	ENSPANG00000021561	CPEB3	100	70.213	Papio_anubis
ENSHCOG00000005747	cpeb3	100	82.764	ENSPKIG00000015878	cpeb3	98	82.388	Paramormyrops_kingsleyae
ENSHCOG00000005747	cpeb3	100	70.465	ENSPMGG00000022722	cpeb3	100	71.856	Periophthalmus_magnuspinnatus
ENSHCOG00000005747	cpeb3	100	70.833	ENSPEMG00000008448	Cpeb3	100	70.932	Peromyscus_maniculatus_bairdii
ENSHCOG00000005747	cpeb3	100	68.707	ENSPCIG00000017302	CPEB3	100	68.852	Phascolarctos_cinereus
ENSHCOG00000005747	cpeb3	100	77.361	ENSPFOG00000011231	cpeb3	100	78.561	Poecilia_formosa
ENSHCOG00000005747	cpeb3	100	81.166	ENSPLAG00000002852	cpeb3	100	81.315	Poecilia_latipinna
ENSHCOG00000005747	cpeb3	100	80.650	ENSPMEG00000021572	cpeb3	100	81.093	Poecilia_mexicana
ENSHCOG00000005747	cpeb3	100	81.166	ENSPREG00000003085	cpeb3	100	81.016	Poecilia_reticulata
ENSHCOG00000005747	cpeb3	100	64.266	ENSPPYG00000002481	CPEB3	100	65.064	Pongo_abelii
ENSHCOG00000005747	cpeb3	100	64.804	ENSPCAG00000012417	CPEB3	100	65.315	Procavia_capensis
ENSHCOG00000005747	cpeb3	100	71.569	ENSPCOG00000023690	CPEB3	100	71.809	Propithecus_coquereli
ENSHCOG00000005747	cpeb3	82	87.097	ENSPVAG00000007664	CPEB3	74	87.097	Pteropus_vampyrus
ENSHCOG00000005747	cpeb3	100	83.923	ENSPNYG00000005300	cpeb3	100	83.900	Pundamilia_nyererei
ENSHCOG00000005747	cpeb3	100	78.074	ENSPNAG00000012111	cpeb3	100	78.855	Pygocentrus_nattereri
ENSHCOG00000005747	cpeb3	96	71.407	ENSRNOG00000020689	Cpeb3	94	66.667	Rattus_norvegicus
ENSHCOG00000005747	cpeb3	100	70.833	ENSRBIG00000041079	CPEB3	100	70.711	Rhinopithecus_bieti
ENSHCOG00000005747	cpeb3	100	70.833	ENSRROG00000031558	CPEB3	100	70.711	Rhinopithecus_roxellana
ENSHCOG00000005747	cpeb3	67	81.757	ENSSBOG00000035843	CPEB3	100	81.757	Saimiri_boliviensis_boliviensis
ENSHCOG00000005747	cpeb3	100	74.052	ENSSFOG00015004974	cpeb3	100	72.821	Scleropages_formosus
ENSHCOG00000005747	cpeb3	66	71.591	ENSSFOG00015018275	-	100	72.454	Scleropages_formosus
ENSHCOG00000005747	cpeb3	100	84.077	ENSSMAG00000013924	cpeb3	100	83.857	Scophthalmus_maximus
ENSHCOG00000005747	cpeb3	100	80.848	ENSSDUG00000019766	cpeb3	100	80.234	Seriola_dumerili
ENSHCOG00000005747	cpeb3	100	83.238	ENSSLDG00000021438	cpeb3	100	82.496	Seriola_lalandi_dorsalis
ENSHCOG00000005747	cpeb3	57	87.634	ENSSARG00000001994	CPEB3	100	87.634	Sorex_araneus
ENSHCOG00000005747	cpeb3	100	83.671	ENSSPAG00000004725	cpeb3	100	82.948	Stegastes_partitus
ENSHCOG00000005747	cpeb3	100	70.442	ENSSSCG00000010468	CPEB3	100	70.210	Sus_scrofa
ENSHCOG00000005747	cpeb3	100	75.731	ENSTGUG00000008988	CPEB3	100	76.100	Taeniopygia_guttata
ENSHCOG00000005747	cpeb3	65	77.882	ENSTBEG00000013125	-	60	77.882	Tupaia_belangeri
ENSHCOG00000005747	cpeb3	100	66.714	ENSTTRG00000012334	CPEB3	100	67.514	Tursiops_truncatus
ENSHCOG00000005747	cpeb3	100	69.748	ENSUAMG00000010827	CPEB3	90	88.017	Ursus_americanus
ENSHCOG00000005747	cpeb3	100	68.951	ENSVVUG00000021375	CPEB3	100	69.048	Vulpes_vulpes
ENSHCOG00000005747	cpeb3	100	72.280	ENSXETG00000012190	cpeb3	98	72.876	Xenopus_tropicalis
ENSHCOG00000005747	cpeb3	100	76.233	ENSXCOG00000006122	cpeb3	100	76.682	Xiphophorus_couchianus
ENSHCOG00000005747	cpeb3	100	77.877	ENSXMAG00000007652	cpeb3	99	92.532	Xiphophorus_maculatus