EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005774 (Gene tree)
Gene ID: 109520353
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 20841 bases
Position: chrKV880086.1:743311-764151
Accession: 109520353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020038	RRM_1	PF00076.22	2.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007227	-	755	XM_019877493	ENSHCOP00000020038	192 (aa)	XP_019733052	UPI00094EB2CC

Gene Model

Click here to download ENSHCOG00000005774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005774	rbpms	93	70.968	ENSHCOG00000018429	rbpms2b	94	73.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005774	rbpms	99	85.864	ENSG00000157110	RBPMS	97	85.864	Homo_sapiens
ENSHCOG00000005774	rbpms	99	97.382	ENSAPOG00000022304	RBPMS	98	97.382	Acanthochromis_polyacanthus
ENSHCOG00000005774	rbpms	82	86.792	ENSAMEG00000001522	RBPMS	73	86.792	Ailuropoda_melanoleuca
ENSHCOG00000005774	rbpms	64	93.443	ENSACIG00000011395	RBPMS	66	93.443	Amphilophus_citrinellus
ENSHCOG00000005774	rbpms	99	97.382	ENSAOCG00000007731	RBPMS	98	97.382	Amphiprion_ocellaris
ENSHCOG00000005774	rbpms	99	97.382	ENSAPEG00000023543	RBPMS	98	97.382	Amphiprion_percula
ENSHCOG00000005774	rbpms	99	96.335	ENSATEG00000018184	RBPMS	98	96.335	Anabas_testudineus
ENSHCOG00000005774	rbpms	100	83.756	ENSACAG00000003012	RBPMS	100	83.756	Anolis_carolinensis
ENSHCOG00000005774	rbpms	99	85.864	ENSANAG00000028150	RBPMS	97	85.864	Aotus_nancymaae
ENSHCOG00000005774	rbpms	99	97.382	ENSACLG00000002926	RBPMS	98	97.382	Astatotilapia_calliptera
ENSHCOG00000005774	rbpms	99	92.670	ENSAMXG00000033491	rbpms	99	92.670	Astyanax_mexicanus
ENSHCOG00000005774	rbpms	99	84.375	ENSBTAG00000033727	RBPMS	79	84.971	Bos_taurus
ENSHCOG00000005774	rbpms	99	85.864	ENSCJAG00000012366	RBPMS	97	85.864	Callithrix_jacchus
ENSHCOG00000005774	rbpms	89	86.628	ENSCAFG00000006503	RBPMS	79	86.628	Canis_familiaris
ENSHCOG00000005774	rbpms	89	86.628	ENSCAFG00020001031	RBPMS	79	86.628	Canis_lupus_dingo
ENSHCOG00000005774	rbpms	99	78.756	ENSCHIG00000027156	RBPMS	98	78.756	Capra_hircus
ENSHCOG00000005774	rbpms	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSHCOG00000005774	rbpms	99	85.340	ENSCPOG00000038597	RBPMS	97	85.340	Cavia_porcellus
ENSHCOG00000005774	rbpms	99	85.864	ENSCCAG00000033226	RBPMS	97	85.864	Cebus_capucinus
ENSHCOG00000005774	rbpms	99	85.864	ENSCATG00000036486	RBPMS	97	85.864	Cercocebus_atys
ENSHCOG00000005774	rbpms	90	87.356	ENSCLAG00000001518	RBPMS	100	87.356	Chinchilla_lanigera
ENSHCOG00000005774	rbpms	89	86.628	ENSCSAG00000015838	RBPMS	79	86.628	Chlorocebus_sabaeus
ENSHCOG00000005774	rbpms	80	88.387	ENSCHOG00000008745	RBPMS	79	88.387	Choloepus_hoffmanni
ENSHCOG00000005774	rbpms	98	83.684	ENSCPBG00000013437	RBPMS	97	83.684	Chrysemys_picta_bellii
ENSHCOG00000005774	rbpms	90	87.356	ENSCANG00000034997	RBPMS	100	87.356	Colobus_angolensis_palliatus
ENSHCOG00000005774	rbpms	99	81.250	ENSCGRG00001002814	Rbpms	97	85.417	Cricetulus_griseus_chok1gshd
ENSHCOG00000005774	rbpms	90	82.286	ENSCGRG00000006095	Rbpms	100	86.857	Cricetulus_griseus_crigri
ENSHCOG00000005774	rbpms	99	95.789	ENSCSEG00000002777	rbpms	99	96.133	Cynoglossus_semilaevis
ENSHCOG00000005774	rbpms	99	97.382	ENSCVAG00000013975	RBPMS	98	97.382	Cyprinodon_variegatus
ENSHCOG00000005774	rbpms	88	71.006	ENSDARG00000099396	rbpms	100	71.006	Danio_rerio
ENSHCOG00000005774	rbpms	89	86.047	ENSDNOG00000008126	RBPMS	79	86.047	Dasypus_novemcinctus
ENSHCOG00000005774	rbpms	89	87.209	ENSETEG00000017582	RBPMS	79	87.209	Echinops_telfairi
ENSHCOG00000005774	rbpms	80	88.387	ENSEASG00005016962	RBPMS	78	88.387	Equus_asinus_asinus
ENSHCOG00000005774	rbpms	89	86.047	ENSECAG00000020735	RBPMS	78	88.387	Equus_caballus
ENSHCOG00000005774	rbpms	99	91.623	ENSELUG00000009787	rbpms	98	91.623	Esox_lucius
ENSHCOG00000005774	rbpms	99	85.340	ENSFCAG00000025639	-	97	85.340	Felis_catus
ENSHCOG00000005774	rbpms	89	53.488	ENSFCAG00000022292	-	80	53.488	Felis_catus
ENSHCOG00000005774	rbpms	90	87.356	ENSFDAG00000012078	RBPMS	100	87.356	Fukomys_damarensis
ENSHCOG00000005774	rbpms	99	97.382	ENSFHEG00000000618	rbpms	98	97.382	Fundulus_heteroclitus
ENSHCOG00000005774	rbpms	77	59.864	ENSGMOG00000009646	-	98	59.864	Gadus_morhua
ENSHCOG00000005774	rbpms	99	96.859	ENSGAFG00000016566	RBPMS	98	96.859	Gambusia_affinis
ENSHCOG00000005774	rbpms	99	85.340	ENSGACG00000019471	rbpms	98	85.340	Gasterosteus_aculeatus
ENSHCOG00000005774	rbpms	60	85.345	ENSGAGG00000023634	RBPMS	54	83.065	Gopherus_agassizii
ENSHCOG00000005774	rbpms	99	97.382	ENSHBUG00000005888	RBPMS	98	97.382	Haplochromis_burtoni
ENSHCOG00000005774	rbpms	99	85.864	ENSHGLG00000002303	RBPMS	97	85.864	Heterocephalus_glaber_female
ENSHCOG00000005774	rbpms	90	87.356	ENSHGLG00100008787	RBPMS	100	87.356	Heterocephalus_glaber_male
ENSHCOG00000005774	rbpms	100	87.565	ENSIPUG00000012459	RBPMS	100	87.565	Ictalurus_punctatus
ENSHCOG00000005774	rbpms	99	85.340	ENSSTOG00000026546	RBPMS	97	85.340	Ictidomys_tridecemlineatus
ENSHCOG00000005774	rbpms	99	85.864	ENSJJAG00000014024	Rbpms	97	85.864	Jaculus_jaculus
ENSHCOG00000005774	rbpms	90	78.977	ENSKMAG00000006377	RBPMS	88	80.571	Kryptolebias_marmoratus
ENSHCOG00000005774	rbpms	99	96.335	ENSLBEG00000027989	RBPMS	97	98.266	Labrus_bergylta
ENSHCOG00000005774	rbpms	91	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSHCOG00000005774	rbpms	90	86.127	ENSLAFG00000000209	RBPMS	79	86.127	Loxodonta_africana
ENSHCOG00000005774	rbpms	99	85.864	ENSMFAG00000036911	RBPMS	97	85.864	Macaca_fascicularis
ENSHCOG00000005774	rbpms	99	85.864	ENSMMUG00000000458	RBPMS	97	85.864	Macaca_mulatta
ENSHCOG00000005774	rbpms	99	85.864	ENSMNEG00000043805	RBPMS	97	85.864	Macaca_nemestrina
ENSHCOG00000005774	rbpms	90	87.356	ENSMLEG00000015635	RBPMS	100	87.356	Mandrillus_leucophaeus
ENSHCOG00000005774	rbpms	95	74.725	ENSMAMG00000004604	RBPMS	93	74.725	Mastacembelus_armatus
ENSHCOG00000005774	rbpms	99	97.382	ENSMZEG00005000698	RBPMS	98	97.382	Maylandia_zebra
ENSHCOG00000005774	rbpms	91	85.714	ENSMGAG00000005088	RBPMS	90	85.714	Meleagris_gallopavo
ENSHCOG00000005774	rbpms	99	81.250	ENSMAUG00000018892	Rbpms	97	85.417	Mesocricetus_auratus
ENSHCOG00000005774	rbpms	99	81.152	ENSMICG00000001295	RBPMS	97	84.817	Microcebus_murinus
ENSHCOG00000005774	rbpms	99	81.250	ENSMOCG00000014009	Rbpms	97	85.417	Microtus_ochrogaster
ENSHCOG00000005774	rbpms	83	94.340	ENSMMOG00000012036	RBPMS	67	94.340	Mola_mola
ENSHCOG00000005774	rbpms	98	84.127	ENSMODG00000019006	RBPMS	90	83.684	Monodelphis_domestica
ENSHCOG00000005774	rbpms	99	94.764	ENSMALG00000003261	RBPMS	98	94.764	Monopterus_albus
ENSHCOG00000005774	rbpms	99	80.729	MGP_CAROLIEiJ_G0030970	Rbpms	97	84.896	Mus_caroli
ENSHCOG00000005774	rbpms	99	80.729	ENSMUSG00000031586	Rbpms	97	84.896	Mus_musculus
ENSHCOG00000005774	rbpms	99	80.729	MGP_PahariEiJ_G0021439	Rbpms	97	84.896	Mus_pahari
ENSHCOG00000005774	rbpms	99	80.729	MGP_SPRETEiJ_G0032087	Rbpms	97	84.896	Mus_spretus
ENSHCOG00000005774	rbpms	82	86.792	ENSMPUG00000011314	RBPMS	73	86.792	Mustela_putorius_furo
ENSHCOG00000005774	rbpms	99	85.340	ENSMLUG00000009391	RBPMS	97	86.928	Myotis_lucifugus
ENSHCOG00000005774	rbpms	89	86.628	ENSNGAG00000011141	Rbpms	79	86.628	Nannospalax_galili
ENSHCOG00000005774	rbpms	91	98.276	ENSNBRG00000003313	RBPMS	97	98.276	Neolamprologus_brichardi
ENSHCOG00000005774	rbpms	99	85.340	ENSNLEG00000036183	-	97	85.340	Nomascus_leucogenys
ENSHCOG00000005774	rbpms	66	87.402	ENSOPRG00000013151	RBPMS	58	87.402	Ochotona_princeps
ENSHCOG00000005774	rbpms	99	85.864	ENSODEG00000006700	RBPMS	97	85.864	Octodon_degus
ENSHCOG00000005774	rbpms	91	98.276	ENSONIG00000007546	RBPMS	100	98.276	Oreochromis_niloticus
ENSHCOG00000005774	rbpms	89	86.628	ENSOCUG00000008572	RBPMS	79	86.628	Oryctolagus_cuniculus
ENSHCOG00000005774	rbpms	99	96.859	ENSORLG00000004135	-	98	96.859	Oryzias_latipes
ENSHCOG00000005774	rbpms	99	97.382	ENSORLG00020016179	RBPMS	98	97.382	Oryzias_latipes_hni
ENSHCOG00000005774	rbpms	99	97.382	ENSORLG00015013770	RBPMS	98	97.382	Oryzias_latipes_hsok
ENSHCOG00000005774	rbpms	99	95.812	ENSOMEG00000005044	RBPMS	98	95.812	Oryzias_melastigma
ENSHCOG00000005774	rbpms	91	85.227	ENSOGAG00000030298	RBPMS	79	85.227	Otolemur_garnettii
ENSHCOG00000005774	rbpms	66	83.333	ENSOARG00000010366	RBPMS	89	83.333	Ovis_aries
ENSHCOG00000005774	rbpms	90	87.356	ENSPPAG00000033108	RBPMS	100	87.356	Pan_paniscus
ENSHCOG00000005774	rbpms	99	85.340	ENSPPRG00000004836	RBPMS	97	85.340	Panthera_pardus
ENSHCOG00000005774	rbpms	90	87.356	ENSPTIG00000015964	RBPMS	89	87.356	Panthera_tigris_altaica
ENSHCOG00000005774	rbpms	99	85.864	ENSPTRG00000020135	RBPMS	97	85.864	Pan_troglodytes
ENSHCOG00000005774	rbpms	99	85.864	ENSPANG00000008143	RBPMS	97	85.864	Papio_anubis
ENSHCOG00000005774	rbpms	99	91.099	ENSPKIG00000000535	-	98	91.099	Paramormyrops_kingsleyae
ENSHCOG00000005774	rbpms	98	89.362	ENSPKIG00000004836	rbpms	99	89.362	Paramormyrops_kingsleyae
ENSHCOG00000005774	rbpms	90	85.632	ENSPSIG00000006136	RBPMS	99	85.632	Pelodiscus_sinensis
ENSHCOG00000005774	rbpms	82	96.203	ENSPMGG00000018012	RBPMS	74	96.203	Periophthalmus_magnuspinnatus
ENSHCOG00000005774	rbpms	99	81.347	ENSPEMG00000021130	Rbpms	98	84.536	Peromyscus_maniculatus_bairdii
ENSHCOG00000005774	rbpms	93	85.000	ENSPCIG00000019298	-	71	82.456	Phascolarctos_cinereus
ENSHCOG00000005774	rbpms	99	96.859	ENSPFOG00000017158	RBPMS	98	96.859	Poecilia_formosa
ENSHCOG00000005774	rbpms	99	96.859	ENSPLAG00000010767	RBPMS	98	96.859	Poecilia_latipinna
ENSHCOG00000005774	rbpms	99	96.859	ENSPMEG00000009788	RBPMS	98	96.859	Poecilia_mexicana
ENSHCOG00000005774	rbpms	99	96.859	ENSPREG00000016959	RBPMS	98	96.859	Poecilia_reticulata
ENSHCOG00000005774	rbpms	89	86.628	ENSPPYG00000018487	RBPMS	79	86.628	Pongo_abelii
ENSHCOG00000005774	rbpms	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSHCOG00000005774	rbpms	91	70.455	ENSPCOG00000015948	RBPMS	84	71.512	Propithecus_coquereli
ENSHCOG00000005774	rbpms	89	86.047	ENSPVAG00000001661	RBPMS	79	86.047	Pteropus_vampyrus
ENSHCOG00000005774	rbpms	99	97.382	ENSPNYG00000001172	RBPMS	98	97.382	Pundamilia_nyererei
ENSHCOG00000005774	rbpms	99	94.764	ENSPNAG00000029160	RBPMS	99	94.764	Pygocentrus_nattereri
ENSHCOG00000005774	rbpms	91	80.226	ENSRNOG00000013328	Rbpms	86	84.270	Rattus_norvegicus
ENSHCOG00000005774	rbpms	90	87.356	ENSRBIG00000038218	RBPMS	100	87.356	Rhinopithecus_bieti
ENSHCOG00000005774	rbpms	99	85.864	ENSRROG00000042518	RBPMS	97	85.864	Rhinopithecus_roxellana
ENSHCOG00000005774	rbpms	99	85.340	ENSSBOG00000026670	RBPMS	97	85.340	Saimiri_boliviensis_boliviensis
ENSHCOG00000005774	rbpms	93	85.475	ENSSHAG00000010114	RBPMS	92	85.475	Sarcophilus_harrisii
ENSHCOG00000005774	rbpms	91	90.230	ENSSFOG00015017481	-	99	88.298	Scleropages_formosus
ENSHCOG00000005774	rbpms	98	90.957	ENSSFOG00015000417	rbpms	97	90.957	Scleropages_formosus
ENSHCOG00000005774	rbpms	99	96.335	ENSSMAG00000010871	rbpms	98	96.335	Scophthalmus_maximus
ENSHCOG00000005774	rbpms	99	96.859	ENSSDUG00000010894	RBPMS	98	96.859	Seriola_dumerili
ENSHCOG00000005774	rbpms	99	96.859	ENSSLDG00000012916	RBPMS	98	96.859	Seriola_lalandi_dorsalis
ENSHCOG00000005774	rbpms	90	82.659	ENSSARG00000000274	RBPMS	79	82.659	Sorex_araneus
ENSHCOG00000005774	rbpms	95	82.609	ENSSPUG00000017525	RBPMS	70	82.609	Sphenodon_punctatus
ENSHCOG00000005774	rbpms	93	74.302	ENSSPAG00000004777	rbpms	80	96.183	Stegastes_partitus
ENSHCOG00000005774	rbpms	99	85.340	ENSSSCG00000015846	RBPMS	97	85.340	Sus_scrofa
ENSHCOG00000005774	rbpms	98	82.632	ENSTGUG00000001776	RBPMS	100	82.632	Taeniopygia_guttata
ENSHCOG00000005774	rbpms	99	95.288	ENSTRUG00000000041	RBPMS	98	95.288	Takifugu_rubripes
ENSHCOG00000005774	rbpms	90	85.465	ENSTTRG00000012451	RBPMS	79	85.465	Tursiops_truncatus
ENSHCOG00000005774	rbpms	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSHCOG00000005774	rbpms	85	86.061	ENSUMAG00000007347	RBPMS	76	87.821	Ursus_maritimus
ENSHCOG00000005774	rbpms	80	88.387	ENSVPAG00000010991	RBPMS	79	88.387	Vicugna_pacos
ENSHCOG00000005774	rbpms	99	85.864	ENSVVUG00000019770	RBPMS	97	85.864	Vulpes_vulpes
ENSHCOG00000005774	rbpms	90	88.506	ENSXETG00000011290	rbpms	100	88.506	Xenopus_tropicalis
ENSHCOG00000005774	rbpms	91	91.954	ENSXCOG00000002436	RBPMS	90	91.954	Xiphophorus_couchianus
ENSHCOG00000005774	rbpms	99	96.859	ENSXMAG00000027637	RBPMS	98	96.859	Xiphophorus_maculatus