EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000005813 (Gene tree)
Gene ID: 109516418
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2338 bases
Position: chrKV879957.1:305150-307487
Accession: 109516418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020053	RRP7	PF12923.7	1.9e-30	1	1
ENSHCOP00000020053	RRM_1	PF00076.22	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007158	-	1293	XM_019870946	ENSHCOP00000020053	318 (aa)	XP_019726505	-

Gene Model

Click here to download ENSHCOG00000005813's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005813	rrp7a	82	48.689	ENSG00000189306	RRP7A	93	48.315	Homo_sapiens
ENSHCOG00000005813	rrp7a	87	74.113	ENSAPOG00000021250	rrp7a	100	74.721	Acanthochromis_polyacanthus
ENSHCOG00000005813	rrp7a	82	49.064	ENSAMEG00000009503	RRP7A	93	47.940	Ailuropoda_melanoleuca
ENSHCOG00000005813	rrp7a	87	72.085	ENSACIG00000023067	rrp7a	100	72.085	Amphilophus_citrinellus
ENSHCOG00000005813	rrp7a	87	75.532	ENSAOCG00000004115	rrp7a	100	75.532	Amphiprion_ocellaris
ENSHCOG00000005813	rrp7a	87	75.887	ENSAPEG00000013688	rrp7a	100	75.887	Amphiprion_percula
ENSHCOG00000005813	rrp7a	87	74.823	ENSATEG00000009664	rrp7a	100	74.823	Anabas_testudineus
ENSHCOG00000005813	rrp7a	88	49.645	ENSACAG00000003579	RRP7A	100	50.000	Anolis_carolinensis
ENSHCOG00000005813	rrp7a	82	48.315	ENSANAG00000031200	RRP7A	93	47.940	Aotus_nancymaae
ENSHCOG00000005813	rrp7a	87	74.468	ENSACLG00000016790	rrp7a	100	74.468	Astatotilapia_calliptera
ENSHCOG00000005813	rrp7a	88	67.491	ENSAMXG00000007921	rrp7a	96	67.491	Astyanax_mexicanus
ENSHCOG00000005813	rrp7a	82	49.434	ENSBTAG00000016510	RRP7A	93	49.057	Bos_taurus
ENSHCOG00000005813	rrp7a	82	48.302	ENSCJAG00000009668	RRP7A	93	47.925	Callithrix_jacchus
ENSHCOG00000005813	rrp7a	82	50.562	ENSCAFG00000000965	RRP7	93	49.813	Canis_familiaris
ENSHCOG00000005813	rrp7a	82	50.562	ENSCAFG00020000251	RRP7A	93	49.813	Canis_lupus_dingo
ENSHCOG00000005813	rrp7a	82	49.434	ENSCHIG00000026787	RRP7A	93	49.057	Capra_hircus
ENSHCOG00000005813	rrp7a	82	46.038	ENSTSYG00000000198	RRP7A	93	45.660	Carlito_syrichta
ENSHCOG00000005813	rrp7a	82	48.872	ENSCAPG00000002325	RRP7A	100	48.120	Cavia_aperea
ENSHCOG00000005813	rrp7a	82	49.248	ENSCPOG00000030547	RRP7A	93	48.496	Cavia_porcellus
ENSHCOG00000005813	rrp7a	68	46.789	ENSCCAG00000021486	RRP7A	92	46.789	Cebus_capucinus
ENSHCOG00000005813	rrp7a	82	49.811	ENSCLAG00000016715	RRP7A	93	49.811	Chinchilla_lanigera
ENSHCOG00000005813	rrp7a	82	48.689	ENSCSAG00000005657	RRP7A	93	48.315	Chlorocebus_sabaeus
ENSHCOG00000005813	rrp7a	87	47.687	ENSCPBG00000021814	RRP7A	100	47.331	Chrysemys_picta_bellii
ENSHCOG00000005813	rrp7a	69	35.242	ENSCSAVG00000002555	-	85	33.186	Ciona_savignyi
ENSHCOG00000005813	rrp7a	57	75.000	ENSCGRG00001021873	-	95	82.143	Cricetulus_griseus_chok1gshd
ENSHCOG00000005813	rrp7a	71	46.552	ENSCGRG00001005713	-	99	46.121	Cricetulus_griseus_chok1gshd
ENSHCOG00000005813	rrp7a	81	43.130	ENSCGRG00000000540	-	100	42.748	Cricetulus_griseus_crigri
ENSHCOG00000005813	rrp7a	82	43.657	ENSCGRG00000000552	-	93	43.284	Cricetulus_griseus_crigri
ENSHCOG00000005813	rrp7a	86	46.429	ENSCGRG00000009567	-	97	46.429	Cricetulus_griseus_crigri
ENSHCOG00000005813	rrp7a	87	70.213	ENSCSEG00000007185	rrp7a	100	70.213	Cynoglossus_semilaevis
ENSHCOG00000005813	rrp7a	87	71.277	ENSCVAG00000004349	rrp7a	100	71.277	Cyprinodon_variegatus
ENSHCOG00000005813	rrp7a	87	58.451	ENSDARG00000098934	rrp7a	100	58.451	Danio_rerio
ENSHCOG00000005813	rrp7a	86	47.842	ENSDNOG00000037442	RRP7A	89	47.292	Dasypus_novemcinctus
ENSHCOG00000005813	rrp7a	85	48.188	ENSDORG00000016138	Rrp7a	94	48.699	Dipodomys_ordii
ENSHCOG00000005813	rrp7a	82	30.882	FBgn0031764	CG9107	98	30.515	Drosophila_melanogaster
ENSHCOG00000005813	rrp7a	81	47.126	ENSETEG00000018025	RRP7A	100	46.743	Echinops_telfairi
ENSHCOG00000005813	rrp7a	85	41.026	ENSEBUG00000010231	rrp7a	92	39.925	Eptatretus_burgeri
ENSHCOG00000005813	rrp7a	82	48.689	ENSEASG00005000804	RRP7A	97	46.209	Equus_asinus_asinus
ENSHCOG00000005813	rrp7a	82	49.438	ENSECAG00000015168	RRP7	97	46.931	Equus_caballus
ENSHCOG00000005813	rrp7a	87	66.312	ENSELUG00000009036	rrp7a	100	66.312	Esox_lucius
ENSHCOG00000005813	rrp7a	86	46.182	ENSFCAG00000033258	RRP7A	76	45.818	Felis_catus
ENSHCOG00000005813	rrp7a	81	50.000	ENSFALG00000011635	RRP7A	95	46.367	Ficedula_albicollis
ENSHCOG00000005813	rrp7a	82	49.813	ENSFDAG00000001321	RRP7A	94	49.813	Fukomys_damarensis
ENSHCOG00000005813	rrp7a	90	73.356	ENSFHEG00000006098	rrp7a	99	73.356	Fundulus_heteroclitus
ENSHCOG00000005813	rrp7a	83	65.799	ENSGMOG00000006218	rrp7a	100	65.799	Gadus_morhua
ENSHCOG00000005813	rrp7a	84	50.741	ENSGALG00000011866	RRP7A	97	50.370	Gallus_gallus
ENSHCOG00000005813	rrp7a	87	67.376	ENSGAFG00000017459	rrp7a	100	67.376	Gambusia_affinis
ENSHCOG00000005813	rrp7a	83	71.747	ENSGACG00000007212	rrp7a	100	71.747	Gasterosteus_aculeatus
ENSHCOG00000005813	rrp7a	87	47.331	ENSGAGG00000014621	RRP7A	100	46.975	Gopherus_agassizii
ENSHCOG00000005813	rrp7a	82	47.547	ENSGGOG00000014957	RRP7A	93	47.170	Gorilla_gorilla
ENSHCOG00000005813	rrp7a	87	74.468	ENSHBUG00000021788	rrp7a	100	74.468	Haplochromis_burtoni
ENSHCOG00000005813	rrp7a	85	47.636	ENSHGLG00000015706	RRP7A	96	46.909	Heterocephalus_glaber_female
ENSHCOG00000005813	rrp7a	82	47.191	ENSHGLG00100008187	-	94	47.566	Heterocephalus_glaber_male
ENSHCOG00000005813	rrp7a	82	47.170	ENSHGLG00100009556	-	93	46.415	Heterocephalus_glaber_male
ENSHCOG00000005813	rrp7a	84	63.235	ENSIPUG00000000556	rrp7a	96	63.704	Ictalurus_punctatus
ENSHCOG00000005813	rrp7a	82	48.302	ENSSTOG00000003111	RRP7A	93	48.302	Ictidomys_tridecemlineatus
ENSHCOG00000005813	rrp7a	82	46.792	ENSJJAG00000019486	Rrp7a	97	45.652	Jaculus_jaculus
ENSHCOG00000005813	rrp7a	87	73.404	ENSKMAG00000013819	rrp7a	100	73.404	Kryptolebias_marmoratus
ENSHCOG00000005813	rrp7a	82	50.566	ENSLACG00000002670	RRP7A	96	50.566	Latimeria_chalumnae
ENSHCOG00000005813	rrp7a	82	48.315	ENSLAFG00000012447	RRP7A	93	47.566	Loxodonta_africana
ENSHCOG00000005813	rrp7a	82	48.689	ENSMFAG00000042855	RRP7A	93	48.315	Macaca_fascicularis
ENSHCOG00000005813	rrp7a	82	44.195	ENSMFAG00000041664	-	93	43.820	Macaca_fascicularis
ENSHCOG00000005813	rrp7a	82	42.045	ENSMMUG00000009716	RRP7A	92	41.667	Macaca_mulatta
ENSHCOG00000005813	rrp7a	82	46.038	ENSMMUG00000010193	-	93	45.693	Macaca_mulatta
ENSHCOG00000005813	rrp7a	82	49.064	ENSMNEG00000033705	RRP7A	93	48.689	Macaca_nemestrina
ENSHCOG00000005813	rrp7a	82	45.865	ENSMLEG00000040230	RRP7A	99	45.489	Mandrillus_leucophaeus
ENSHCOG00000005813	rrp7a	87	71.986	ENSMAMG00000009125	rrp7a	100	71.986	Mastacembelus_armatus
ENSHCOG00000005813	rrp7a	87	74.468	ENSMZEG00005005197	rrp7a	100	74.468	Maylandia_zebra
ENSHCOG00000005813	rrp7a	81	50.958	ENSMGAG00000011980	RRP7A	100	50.575	Meleagris_gallopavo
ENSHCOG00000005813	rrp7a	82	48.315	ENSMICG00000041800	RRP7A	93	47.566	Microcebus_murinus
ENSHCOG00000005813	rrp7a	87	75.177	ENSMMOG00000004976	rrp7a	100	75.177	Mola_mola
ENSHCOG00000005813	rrp7a	82	47.059	ENSMODG00000006914	RRP7A	100	43.894	Monodelphis_domestica
ENSHCOG00000005813	rrp7a	87	70.922	ENSMALG00000001933	rrp7a	100	70.922	Monopterus_albus
ENSHCOG00000005813	rrp7a	82	47.566	MGP_CAROLIEiJ_G0020092	Rrp7a	93	46.816	Mus_caroli
ENSHCOG00000005813	rrp7a	82	47.566	ENSMUSG00000018040	Rrp7a	84	79.070	Mus_musculus
ENSHCOG00000005813	rrp7a	82	47.566	MGP_PahariEiJ_G0020099	Rrp7a	93	46.816	Mus_pahari
ENSHCOG00000005813	rrp7a	82	47.566	MGP_SPRETEiJ_G0020990	Rrp7a	96	44.948	Mus_spretus
ENSHCOG00000005813	rrp7a	82	47.547	ENSMPUG00000016315	RRP7A	93	46.792	Mustela_putorius_furo
ENSHCOG00000005813	rrp7a	82	48.315	ENSMLUG00000012404	RRP7A	93	47.940	Myotis_lucifugus
ENSHCOG00000005813	rrp7a	82	46.792	ENSNGAG00000010039	Rrp7a	99	44.251	Nannospalax_galili
ENSHCOG00000005813	rrp7a	87	74.377	ENSNBRG00000001824	rrp7a	100	74.377	Neolamprologus_brichardi
ENSHCOG00000005813	rrp7a	82	48.315	ENSNLEG00000036258	RRP7A	93	47.940	Nomascus_leucogenys
ENSHCOG00000005813	rrp7a	82	50.189	ENSODEG00000015126	RRP7A	93	49.434	Octodon_degus
ENSHCOG00000005813	rrp7a	88	74.912	ENSONIG00000008364	rrp7a	100	74.912	Oreochromis_niloticus
ENSHCOG00000005813	rrp7a	73	43.644	ENSOANG00000015007	RRP7A	86	43.644	Ornithorhynchus_anatinus
ENSHCOG00000005813	rrp7a	86	41.091	ENSOCUG00000027434	RRP7A	99	40.909	Oryctolagus_cuniculus
ENSHCOG00000005813	rrp7a	87	69.504	ENSORLG00000014826	rrp7a	100	69.504	Oryzias_latipes
ENSHCOG00000005813	rrp7a	87	69.149	ENSORLG00020006078	rrp7a	100	69.149	Oryzias_latipes_hni
ENSHCOG00000005813	rrp7a	87	69.149	ENSORLG00015018190	rrp7a	100	68.440	Oryzias_latipes_hsok
ENSHCOG00000005813	rrp7a	85	69.708	ENSOMEG00000007090	rrp7a	98	69.708	Oryzias_melastigma
ENSHCOG00000005813	rrp7a	82	47.191	ENSOGAG00000002857	RRP7A	93	46.816	Otolemur_garnettii
ENSHCOG00000005813	rrp7a	82	49.434	ENSOARG00000018986	RRP7A	93	49.057	Ovis_aries
ENSHCOG00000005813	rrp7a	74	46.444	ENSPPAG00000021416	-	83	46.025	Pan_paniscus
ENSHCOG00000005813	rrp7a	69	43.231	ENSPPAG00000029825	-	93	43.043	Pan_paniscus
ENSHCOG00000005813	rrp7a	86	46.909	ENSPPRG00000022185	RRP7A	97	45.818	Panthera_pardus
ENSHCOG00000005813	rrp7a	82	34.211	ENSPTIG00000020965	RRP7A	96	33.574	Panthera_tigris_altaica
ENSHCOG00000005813	rrp7a	82	44.944	ENSPANG00000032001	-	93	44.944	Papio_anubis
ENSHCOG00000005813	rrp7a	82	48.315	ENSPANG00000025354	-	93	47.940	Papio_anubis
ENSHCOG00000005813	rrp7a	88	60.563	ENSPKIG00000007209	rrp7a	86	60.915	Paramormyrops_kingsleyae
ENSHCOG00000005813	rrp7a	81	48.462	ENSPSIG00000007988	RRP7A	97	48.462	Pelodiscus_sinensis
ENSHCOG00000005813	rrp7a	81	51.341	ENSPMGG00000009485	rrp7a	91	57.088	Periophthalmus_magnuspinnatus
ENSHCOG00000005813	rrp7a	88	46.503	ENSPEMG00000022265	Rrp7a	99	45.993	Peromyscus_maniculatus_bairdii
ENSHCOG00000005813	rrp7a	81	43.130	ENSPMAG00000002823	rrp7a	94	43.130	Petromyzon_marinus
ENSHCOG00000005813	rrp7a	82	48.679	ENSPCIG00000026195	RRP7A	93	47.547	Phascolarctos_cinereus
ENSHCOG00000005813	rrp7a	87	68.794	ENSPFOG00000001042	rrp7a	100	68.794	Poecilia_formosa
ENSHCOG00000005813	rrp7a	53	71.512	ENSPLAG00000010787	-	72	71.512	Poecilia_latipinna
ENSHCOG00000005813	rrp7a	53	71.512	ENSPLAG00000009537	rrp7a	72	71.512	Poecilia_latipinna
ENSHCOG00000005813	rrp7a	87	69.149	ENSPMEG00000018204	rrp7a	100	69.149	Poecilia_mexicana
ENSHCOG00000005813	rrp7a	87	68.085	ENSPREG00000016492	rrp7a	100	68.085	Poecilia_reticulata
ENSHCOG00000005813	rrp7a	82	49.064	ENSPPYG00000011897	RRP7A	93	48.689	Pongo_abelii
ENSHCOG00000005813	rrp7a	82	47.566	ENSPCOG00000014018	RRP7A	93	47.191	Propithecus_coquereli
ENSHCOG00000005813	rrp7a	74	42.678	ENSPVAG00000003330	RRP7A	92	42.678	Pteropus_vampyrus
ENSHCOG00000005813	rrp7a	87	74.113	ENSPNYG00000020343	rrp7a	100	74.113	Pundamilia_nyererei
ENSHCOG00000005813	rrp7a	87	66.312	ENSPNAG00000014376	rrp7a	100	66.312	Pygocentrus_nattereri
ENSHCOG00000005813	rrp7a	82	46.840	ENSRNOG00000022896	Rrp7a	93	46.468	Rattus_norvegicus
ENSHCOG00000005813	rrp7a	82	44.610	ENSRBIG00000040358	RRP7A	93	43.985	Rhinopithecus_bieti
ENSHCOG00000005813	rrp7a	82	48.881	ENSRROG00000036754	RRP7A	93	48.507	Rhinopithecus_roxellana
ENSHCOG00000005813	rrp7a	82	46.415	ENSSBOG00000009234	RRP7A	93	46.038	Saimiri_boliviensis_boliviensis
ENSHCOG00000005813	rrp7a	66	51.163	ENSSHAG00000005715	RRP7A	99	50.472	Sarcophilus_harrisii
ENSHCOG00000005813	rrp7a	88	62.544	ENSSFOG00015012621	rrp7a	89	60.071	Scleropages_formosus
ENSHCOG00000005813	rrp7a	87	71.986	ENSSMAG00000004593	rrp7a	100	71.986	Scophthalmus_maximus
ENSHCOG00000005813	rrp7a	87	75.532	ENSSDUG00000016921	rrp7a	100	75.532	Seriola_dumerili
ENSHCOG00000005813	rrp7a	87	75.177	ENSSLDG00000024758	rrp7a	100	75.177	Seriola_lalandi_dorsalis
ENSHCOG00000005813	rrp7a	54	73.810	ENSSARG00000002133	-	66	73.810	Sorex_araneus
ENSHCOG00000005813	rrp7a	74	45.188	ENSSPUG00000005373	RRP7A	95	45.417	Sphenodon_punctatus
ENSHCOG00000005813	rrp7a	87	70.922	ENSSPAG00000016048	rrp7a	100	70.922	Stegastes_partitus
ENSHCOG00000005813	rrp7a	84	47.037	ENSSSCG00000033983	RRP7A	95	46.125	Sus_scrofa
ENSHCOG00000005813	rrp7a	81	49.231	ENSTGUG00000009647	RRP7A	100	48.846	Taeniopygia_guttata
ENSHCOG00000005813	rrp7a	87	73.665	ENSTRUG00000024726	rrp7a	100	73.665	Takifugu_rubripes
ENSHCOG00000005813	rrp7a	88	73.759	ENSTNIG00000010842	rrp7a	100	73.759	Tetraodon_nigroviridis
ENSHCOG00000005813	rrp7a	82	49.813	ENSUAMG00000026180	RRP7A	93	49.438	Ursus_americanus
ENSHCOG00000005813	rrp7a	82	47.566	ENSUMAG00000020394	RRP7A	93	47.191	Ursus_maritimus
ENSHCOG00000005813	rrp7a	81	50.763	ENSVVUG00000002248	-	65	50.000	Vulpes_vulpes
ENSHCOG00000005813	rrp7a	87	45.645	ENSXETG00000013414	rrp7a	100	46.099	Xenopus_tropicalis
ENSHCOG00000005813	rrp7a	87	66.784	ENSXCOG00000015955	rrp7a	100	66.784	Xiphophorus_couchianus
ENSHCOG00000005813	rrp7a	87	66.312	ENSXMAG00000006165	rrp7a	100	66.312	Xiphophorus_maculatus