EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005830 (Gene tree)
Gene ID: 109522394
Gene Symbol: mrpl20
Alias: wu:fa27e09|zgc:153312
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1912 bases
Position: chrKV880150.1:4275584-4277495
Accession: 109522394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020059	Ribosomal_L20	PF00453.18	1.4e-26	1	1
ENSHCOP00000004373	Ribosomal_L20	PF00453.18	2.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007147	-	1157	-	ENSHCOP00000020059	105 (aa)	-	-
ENSHCOT00000007157	-	420	XM_019880923	ENSHCOP00000004373	139 (aa)	XP_019736482	-

Gene Model

Click here to download ENSHCOG00000005830's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005830	mrpl20	65	44.118	ENSHCOG00000010669	-	94	44.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005830	mrpl20	98	63.014	ENSG00000242485	MRPL20	98	63.014	Homo_sapiens
ENSHCOG00000005830	mrpl20	100	79.866	ENSAPOG00000011835	mrpl20	99	88.298	Acanthochromis_polyacanthus
ENSHCOG00000005830	mrpl20	87	66.412	ENSAMEG00000013932	MRPL20	88	66.412	Ailuropoda_melanoleuca
ENSHCOG00000005830	mrpl20	99	82.313	ENSACIG00000019179	mrpl20	99	82.313	Amphilophus_citrinellus
ENSHCOG00000005830	mrpl20	100	81.208	ENSAOCG00000007734	mrpl20	100	81.208	Amphiprion_ocellaris
ENSHCOG00000005830	mrpl20	100	80.537	ENSAPEG00000014049	mrpl20	100	80.537	Amphiprion_percula
ENSHCOG00000005830	mrpl20	100	79.195	ENSATEG00000007369	mrpl20	100	79.195	Anabas_testudineus
ENSHCOG00000005830	mrpl20	90	70.526	ENSACAG00000009143	MRPL20	98	59.589	Anolis_carolinensis
ENSHCOG00000005830	mrpl20	85	60.938	ENSANAG00000021078	-	84	60.938	Aotus_nancymaae
ENSHCOG00000005830	mrpl20	92	78.986	ENSACLG00000021726	mrpl20	88	78.986	Astatotilapia_calliptera
ENSHCOG00000005830	mrpl20	80	66.942	ENSAMXG00000035403	mrpl20	86	66.942	Astyanax_mexicanus
ENSHCOG00000005830	mrpl20	97	61.379	ENSBTAG00000004872	MRPL20	73	61.379	Bos_taurus
ENSHCOG00000005830	mrpl20	98	62.329	ENSCJAG00000039231	-	98	62.329	Callithrix_jacchus
ENSHCOG00000005830	mrpl20	98	64.384	ENSCAFG00000019259	MRPL20	98	64.384	Canis_familiaris
ENSHCOG00000005830	mrpl20	64	74.627	ENSCAFG00020011502	-	62	50.000	Canis_lupus_dingo
ENSHCOG00000005830	mrpl20	71	58.333	ENSCAFG00020025880	-	63	58.333	Canis_lupus_dingo
ENSHCOG00000005830	mrpl20	97	61.379	ENSCHIG00000010545	MRPL20	97	61.379	Capra_hircus
ENSHCOG00000005830	mrpl20	98	65.753	ENSTSYG00000033620	MRPL20	98	65.753	Carlito_syrichta
ENSHCOG00000005830	mrpl20	98	63.699	ENSCPOG00000023001	MRPL20	98	63.699	Cavia_porcellus
ENSHCOG00000005830	mrpl20	98	62.329	ENSCCAG00000032768	-	98	62.329	Cebus_capucinus
ENSHCOG00000005830	mrpl20	83	53.659	ENSCATG00000040437	-	65	53.659	Cercocebus_atys
ENSHCOG00000005830	mrpl20	98	63.699	ENSCATG00000033927	MRPL20	98	63.699	Cercocebus_atys
ENSHCOG00000005830	mrpl20	98	62.329	ENSCLAG00000009757	-	98	62.329	Chinchilla_lanigera
ENSHCOG00000005830	mrpl20	98	51.471	ENSCLAG00000011866	-	97	51.471	Chinchilla_lanigera
ENSHCOG00000005830	mrpl20	98	62.329	ENSCSAG00000019479	-	98	62.329	Chlorocebus_sabaeus
ENSHCOG00000005830	mrpl20	98	63.699	ENSCSAG00000000688	-	98	63.699	Chlorocebus_sabaeus
ENSHCOG00000005830	mrpl20	98	60.959	ENSCPBG00000022905	MRPL20	98	60.959	Chrysemys_picta_bellii
ENSHCOG00000005830	mrpl20	98	45.890	ENSCANG00000039625	MRPL20	98	45.890	Colobus_angolensis_palliatus
ENSHCOG00000005830	mrpl20	98	63.014	ENSCGRG00001024028	Mrpl20	98	63.014	Cricetulus_griseus_chok1gshd
ENSHCOG00000005830	mrpl20	98	63.014	ENSCGRG00000007447	Mrpl20	98	63.014	Cricetulus_griseus_crigri
ENSHCOG00000005830	mrpl20	100	77.181	ENSCSEG00000002016	mrpl20	87	77.181	Cynoglossus_semilaevis
ENSHCOG00000005830	mrpl20	99	74.324	ENSCVAG00000022768	mrpl20	100	74.324	Cyprinodon_variegatus
ENSHCOG00000005830	mrpl20	98	72.603	ENSDARG00000090462	mrpl20	98	72.603	Danio_rerio
ENSHCOG00000005830	mrpl20	98	65.753	ENSDNOG00000044958	MRPL20	98	65.753	Dasypus_novemcinctus
ENSHCOG00000005830	mrpl20	50	55.000	ENSDORG00000028591	Mrpl20	96	55.000	Dipodomys_ordii
ENSHCOG00000005830	mrpl20	91	44.792	FBgn0036335	mRpL20	82	42.276	Drosophila_melanogaster
ENSHCOG00000005830	mrpl20	98	51.370	ENSETEG00000012315	MRPL20	98	51.370	Echinops_telfairi
ENSHCOG00000005830	mrpl20	100	57.616	ENSEBUG00000002214	mrpl20	100	57.616	Eptatretus_burgeri
ENSHCOG00000005830	mrpl20	98	64.384	ENSEASG00005014515	MRPL20	98	64.384	Equus_asinus_asinus
ENSHCOG00000005830	mrpl20	98	64.384	ENSECAG00000018364	MRPL20	98	64.384	Equus_caballus
ENSHCOG00000005830	mrpl20	77	45.299	ENSEEUG00000004596	-	98	45.299	Erinaceus_europaeus
ENSHCOG00000005830	mrpl20	100	76.510	ENSELUG00000013398	mrpl20	100	76.510	Esox_lucius
ENSHCOG00000005830	mrpl20	98	65.068	ENSFCAG00000033203	MRPL20	98	65.068	Felis_catus
ENSHCOG00000005830	mrpl20	98	58.219	ENSFALG00000009334	MRPL20	98	58.219	Ficedula_albicollis
ENSHCOG00000005830	mrpl20	98	63.014	ENSFDAG00000013320	MRPL20	98	63.014	Fukomys_damarensis
ENSHCOG00000005830	mrpl20	99	75.676	ENSFHEG00000004769	mrpl20	100	75.676	Fundulus_heteroclitus
ENSHCOG00000005830	mrpl20	90	84.211	ENSGMOG00000008125	mrpl20	100	75.000	Gadus_morhua
ENSHCOG00000005830	mrpl20	98	60.274	ENSGALG00000001542	MRPL20	98	60.274	Gallus_gallus
ENSHCOG00000005830	mrpl20	99	79.054	ENSGAFG00000021580	mrpl20	100	79.054	Gambusia_affinis
ENSHCOG00000005830	mrpl20	100	79.866	ENSGACG00000001134	mrpl20	100	79.866	Gasterosteus_aculeatus
ENSHCOG00000005830	mrpl20	98	59.589	ENSGAGG00000001945	MRPL20	98	59.589	Gopherus_agassizii
ENSHCOG00000005830	mrpl20	98	63.014	ENSGGOG00000027251	-	98	63.014	Gorilla_gorilla
ENSHCOG00000005830	mrpl20	100	79.866	ENSHBUG00000023626	mrpl20	100	79.866	Haplochromis_burtoni
ENSHCOG00000005830	mrpl20	98	61.644	ENSHGLG00000017538	MRPL20	98	61.644	Heterocephalus_glaber_female
ENSHCOG00000005830	mrpl20	98	62.329	ENSHGLG00100012816	MRPL20	98	62.329	Heterocephalus_glaber_male
ENSHCOG00000005830	mrpl20	100	73.154	ENSIPUG00000018055	mrpl20	100	73.154	Ictalurus_punctatus
ENSHCOG00000005830	mrpl20	98	63.699	ENSJJAG00000020728	Mrpl20	98	63.699	Jaculus_jaculus
ENSHCOG00000005830	mrpl20	100	72.483	ENSKMAG00000021650	mrpl20	100	72.483	Kryptolebias_marmoratus
ENSHCOG00000005830	mrpl20	100	82.639	ENSLBEG00000021562	mrpl20	100	82.639	Labrus_bergylta
ENSHCOG00000005830	mrpl20	90	80.000	ENSLACG00000019149	MRPL20	98	69.595	Latimeria_chalumnae
ENSHCOG00000005830	mrpl20	98	64.384	ENSLAFG00000010706	MRPL20	98	64.384	Loxodonta_africana
ENSHCOG00000005830	mrpl20	98	63.699	ENSMFAG00000043214	MRPL20	98	63.699	Macaca_fascicularis
ENSHCOG00000005830	mrpl20	91	51.825	ENSMFAG00000046195	-	82	51.825	Macaca_fascicularis
ENSHCOG00000005830	mrpl20	89	72.043	ENSMMUG00000038877	MRPL20	90	55.474	Macaca_mulatta
ENSHCOG00000005830	mrpl20	98	63.699	ENSMNEG00000041891	MRPL20	98	63.699	Macaca_nemestrina
ENSHCOG00000005830	mrpl20	88	52.632	ENSMNEG00000000027	-	68	52.632	Macaca_nemestrina
ENSHCOG00000005830	mrpl20	86	51.938	ENSMLEG00000037605	-	79	51.938	Mandrillus_leucophaeus
ENSHCOG00000005830	mrpl20	77	64.103	ENSMLEG00000037086	MRPL20	98	64.103	Mandrillus_leucophaeus
ENSHCOG00000005830	mrpl20	100	80.537	ENSMAMG00000023884	mrpl20	100	80.537	Mastacembelus_armatus
ENSHCOG00000005830	mrpl20	100	79.866	ENSMZEG00005011376	mrpl20	100	79.866	Maylandia_zebra
ENSHCOG00000005830	mrpl20	90	54.074	ENSMGAG00000002774	MRPL20	91	54.074	Meleagris_gallopavo
ENSHCOG00000005830	mrpl20	98	62.329	ENSMAUG00000013299	Mrpl20	98	62.329	Mesocricetus_auratus
ENSHCOG00000005830	mrpl20	98	64.384	ENSMICG00000041892	MRPL20	98	64.384	Microcebus_murinus
ENSHCOG00000005830	mrpl20	98	64.384	ENSMOCG00000000404	-	98	64.384	Microtus_ochrogaster
ENSHCOG00000005830	mrpl20	98	60.959	ENSMOCG00000009545	-	98	60.959	Microtus_ochrogaster
ENSHCOG00000005830	mrpl20	100	55.034	ENSMMOG00000021753	mrpl20	100	55.034	Mola_mola
ENSHCOG00000005830	mrpl20	100	56.376	ENSMODG00000006562	MRPL20	100	56.376	Monodelphis_domestica
ENSHCOG00000005830	mrpl20	100	81.208	ENSMALG00000018593	mrpl20	100	81.208	Monopterus_albus
ENSHCOG00000005830	mrpl20	98	65.068	MGP_CAROLIEiJ_G0026904	Mrpl20	96	71.739	Mus_caroli
ENSHCOG00000005830	mrpl20	98	65.068	ENSMUSG00000029066	Mrpl20	96	71.739	Mus_musculus
ENSHCOG00000005830	mrpl20	98	61.644	MGP_PahariEiJ_G0029252	Mrpl20	98	61.644	Mus_pahari
ENSHCOG00000005830	mrpl20	98	65.068	MGP_SPRETEiJ_G0027898	Mrpl20	96	71.739	Mus_spretus
ENSHCOG00000005830	mrpl20	98	61.644	ENSMLUG00000011857	MRPL20	98	61.644	Myotis_lucifugus
ENSHCOG00000005830	mrpl20	98	63.014	ENSNGAG00000021688	Mrpl20	99	67.021	Nannospalax_galili
ENSHCOG00000005830	mrpl20	100	79.866	ENSNBRG00000006018	mrpl20	100	79.866	Neolamprologus_brichardi
ENSHCOG00000005830	mrpl20	50	56.250	ENSNLEG00000013868	-	78	56.250	Nomascus_leucogenys
ENSHCOG00000005830	mrpl20	98	62.329	ENSODEG00000010734	MRPL20	98	62.329	Octodon_degus
ENSHCOG00000005830	mrpl20	100	79.866	ENSONIG00000018914	mrpl20	100	79.866	Oreochromis_niloticus
ENSHCOG00000005830	mrpl20	88	89.130	ENSORLG00000018304	mrpl20	100	75.168	Oryzias_latipes
ENSHCOG00000005830	mrpl20	88	89.130	ENSORLG00020009128	mrpl20	100	75.168	Oryzias_latipes_hni
ENSHCOG00000005830	mrpl20	88	89.130	ENSORLG00015005156	mrpl20	100	75.168	Oryzias_latipes_hsok
ENSHCOG00000005830	mrpl20	88	88.043	ENSOMEG00000015654	mrpl20	100	75.168	Oryzias_melastigma
ENSHCOG00000005830	mrpl20	98	63.014	ENSOGAG00000005968	MRPL20	98	63.014	Otolemur_garnettii
ENSHCOG00000005830	mrpl20	97	61.379	ENSOARG00000003529	MRPL20	97	61.379	Ovis_aries
ENSHCOG00000005830	mrpl20	98	63.014	ENSPPAG00000042350	-	98	63.014	Pan_paniscus
ENSHCOG00000005830	mrpl20	98	65.068	ENSPPRG00000009188	MRPL20	98	65.068	Panthera_pardus
ENSHCOG00000005830	mrpl20	80	34.444	ENSPTIG00000020769	MRPL20	89	56.790	Panthera_tigris_altaica
ENSHCOG00000005830	mrpl20	98	63.014	ENSPTRG00000000029	MRPL20	98	63.014	Pan_troglodytes
ENSHCOG00000005830	mrpl20	98	63.699	ENSPANG00000015802	MRPL20	98	63.699	Papio_anubis
ENSHCOG00000005830	mrpl20	91	50.370	ENSPANG00000036197	-	98	50.370	Papio_anubis
ENSHCOG00000005830	mrpl20	98	69.178	ENSPKIG00000002248	mrpl20	98	69.178	Paramormyrops_kingsleyae
ENSHCOG00000005830	mrpl20	92	52.857	ENSPSIG00000003939	MRPL20	97	52.857	Pelodiscus_sinensis
ENSHCOG00000005830	mrpl20	100	79.866	ENSPMGG00000003966	mrpl20	100	79.866	Periophthalmus_magnuspinnatus
ENSHCOG00000005830	mrpl20	98	46.575	ENSPEMG00000009458	-	83	46.575	Peromyscus_maniculatus_bairdii
ENSHCOG00000005830	mrpl20	65	44.118	ENSPMAG00000009990	-	75	37.234	Petromyzon_marinus
ENSHCOG00000005830	mrpl20	100	58.389	ENSPCIG00000007747	MRPL20	100	58.389	Phascolarctos_cinereus
ENSHCOG00000005830	mrpl20	99	77.703	ENSPFOG00000018163	mrpl20	100	77.703	Poecilia_formosa
ENSHCOG00000005830	mrpl20	99	77.703	ENSPLAG00000016451	mrpl20	100	77.703	Poecilia_latipinna
ENSHCOG00000005830	mrpl20	99	78.378	ENSPMEG00000002561	mrpl20	100	78.378	Poecilia_mexicana
ENSHCOG00000005830	mrpl20	99	76.510	ENSPREG00000004925	mrpl20	100	76.510	Poecilia_reticulata
ENSHCOG00000005830	mrpl20	98	65.753	ENSPCAG00000001425	MRPL20	98	65.753	Procavia_capensis
ENSHCOG00000005830	mrpl20	97	62.069	ENSPCOG00000004450	-	97	62.069	Propithecus_coquereli
ENSHCOG00000005830	mrpl20	98	66.438	ENSPCOG00000025653	-	98	66.438	Propithecus_coquereli
ENSHCOG00000005830	mrpl20	100	79.866	ENSPNYG00000008626	mrpl20	100	79.866	Pundamilia_nyererei
ENSHCOG00000005830	mrpl20	100	73.826	ENSPNAG00000016694	mrpl20	100	73.826	Pygocentrus_nattereri
ENSHCOG00000005830	mrpl20	98	63.699	ENSRNOG00000018647	Mrpl20	98	63.699	Rattus_norvegicus
ENSHCOG00000005830	mrpl20	98	63.014	ENSRBIG00000042278	MRPL20	98	63.014	Rhinopithecus_bieti
ENSHCOG00000005830	mrpl20	98	63.014	ENSRROG00000003574	MRPL20	98	63.014	Rhinopithecus_roxellana
ENSHCOG00000005830	mrpl20	50	52.500	ENSSBOG00000035454	-	96	52.500	Saimiri_boliviensis_boliviensis
ENSHCOG00000005830	mrpl20	100	56.129	ENSSHAG00000008197	MRPL20	100	56.129	Sarcophilus_harrisii
ENSHCOG00000005830	mrpl20	90	78.947	ENSSFOG00015016009	mrpl20	98	70.548	Scleropages_formosus
ENSHCOG00000005830	mrpl20	100	79.195	ENSSMAG00000000214	mrpl20	100	79.195	Scophthalmus_maximus
ENSHCOG00000005830	mrpl20	100	80.537	ENSSDUG00000008646	mrpl20	100	80.537	Seriola_dumerili
ENSHCOG00000005830	mrpl20	100	79.195	ENSSLDG00000023171	mrpl20	100	79.195	Seriola_lalandi_dorsalis
ENSHCOG00000005830	mrpl20	90	70.526	ENSSPUG00000016911	MRPL20	98	60.959	Sphenodon_punctatus
ENSHCOG00000005830	mrpl20	93	87.755	ENSSPAG00000012887	mrpl20	100	79.866	Stegastes_partitus
ENSHCOG00000005830	mrpl20	98	63.699	ENSSSCG00000033374	MRPL20	98	63.699	Sus_scrofa
ENSHCOG00000005830	mrpl20	78	55.085	ENSTGUG00000003113	MRPL20	96	55.085	Taeniopygia_guttata
ENSHCOG00000005830	mrpl20	88	90.217	ENSTRUG00000021410	mrpl20	100	75.839	Takifugu_rubripes
ENSHCOG00000005830	mrpl20	88	90.217	ENSTNIG00000014657	mrpl20	100	75.839	Tetraodon_nigroviridis
ENSHCOG00000005830	mrpl20	98	65.068	ENSTBEG00000008735	MRPL20	98	65.068	Tupaia_belangeri
ENSHCOG00000005830	mrpl20	76	61.207	ENSTTRG00000017046	MRPL20	97	61.207	Tursiops_truncatus
ENSHCOG00000005830	mrpl20	98	65.753	ENSUAMG00000012829	-	96	73.118	Ursus_americanus
ENSHCOG00000005830	mrpl20	70	54.054	ENSUAMG00000028406	-	73	46.491	Ursus_americanus
ENSHCOG00000005830	mrpl20	70	52.703	ENSUMAG00000003240	-	74	45.690	Ursus_maritimus
ENSHCOG00000005830	mrpl20	50	56.250	ENSUMAG00000001917	-	70	56.250	Ursus_maritimus
ENSHCOG00000005830	mrpl20	50	55.696	ENSVPAG00000001846	-	95	55.696	Vicugna_pacos
ENSHCOG00000005830	mrpl20	98	65.068	ENSVVUG00000004455	MRPL20	98	65.068	Vulpes_vulpes
ENSHCOG00000005830	mrpl20	90	78.947	ENSXETG00000011118	mrpl20	98	68.243	Xenopus_tropicalis
ENSHCOG00000005830	mrpl20	99	77.703	ENSXCOG00000004220	mrpl20	100	77.703	Xiphophorus_couchianus
ENSHCOG00000005830	mrpl20	99	77.703	ENSXMAG00000016652	mrpl20	100	77.703	Xiphophorus_maculatus