EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSHCOG00000006004 (Gene tree)
Gene ID
109522309
Gene Symbol
si:ch1073-335m2.2
Alias
-
Full Name
msx2-interacting protein-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
15697 bases
Position
chrKV880150.1:4187886-4203582
Accession
109522309
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000004537RRM_5PF13893.64.4e-0812
ENSHCOP00000004537RRM_5PF13893.64.4e-0822
ENSHCOP00000004537RRM_1PF00076.224.1e-2712
ENSHCOP00000004537RRM_1PF00076.224.1e-2722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000006878-9422XM_019880736ENSHCOP000000045373053 (aa)XP_019736295-
Gene Model
Click here to download ENSHCOG00000006004's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006004's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000006004si:ch1073-335m2.27380.469ENSG00000065526SPEN8582.869Homo_sapiens
ENSHCOG00000006004si:ch1073-335m2.29972.039ENSAPOG00000011411si:ch1073-335m2.29772.125Acanthochromis_polyacanthus
ENSHCOG00000006004si:ch1073-335m2.29976.812ENSAPOG00000009853-9476.812Acanthochromis_polyacanthus
ENSHCOG00000006004si:ch1073-335m2.26481.250ENSAMEG00000011817SPEN7565.730Ailuropoda_melanoleuca
ENSHCOG00000006004si:ch1073-335m2.29976.812ENSAOCG00000014505-9476.812Amphiprion_ocellaris
ENSHCOG00000006004si:ch1073-335m2.29270.211ENSAOCG00000008077si:ch1073-335m2.29970.314Amphiprion_ocellaris
ENSHCOG00000006004si:ch1073-335m2.29976.812ENSAPEG00000010288-9476.812Amphiprion_percula
ENSHCOG00000006004si:ch1073-335m2.29971.751ENSAPEG00000013515si:ch1073-335m2.29771.878Amphiprion_percula
ENSHCOG00000006004si:ch1073-335m2.29971.655ENSATEG00000007674si:ch1073-335m2.29771.813Anabas_testudineus
ENSHCOG00000006004si:ch1073-335m2.29961.780ENSATEG00000005627-9561.780Anabas_testudineus
ENSHCOG00000006004si:ch1073-335m2.29967.647ENSAPLG00000012618SPEN9367.647Anas_platyrhynchos
ENSHCOG00000006004si:ch1073-335m2.25082.031ENSACAG00000013761SPEN9382.031Anolis_carolinensis
ENSHCOG00000006004si:ch1073-335m2.28180.469ENSANAG00000034428SPEN7180.469Aotus_nancymaae
ENSHCOG00000006004si:ch1073-335m2.29977.536ENSACLG00000016922-9777.536Astatotilapia_calliptera
ENSHCOG00000006004si:ch1073-335m2.29967.404ENSACLG00000021433si:ch1073-335m2.29866.914Astatotilapia_calliptera
ENSHCOG00000006004si:ch1073-335m2.29972.028ENSAMXG00000012485spen9472.028Astyanax_mexicanus
ENSHCOG00000006004si:ch1073-335m2.28481.250ENSBTAG00000018729SPEN7581.250Bos_taurus
ENSHCOG00000006004si:ch1073-335m2.28181.250ENSCJAG00000008527SPEN7181.250Callithrix_jacchus
ENSHCOG00000006004si:ch1073-335m2.27045.764ENSCAFG00000016132-6945.796Canis_familiaris
ENSHCOG00000006004si:ch1073-335m2.28481.250ENSCHIG00000025070SPEN7481.250Capra_hircus
ENSHCOG00000006004si:ch1073-335m2.26781.250ENSTSYG00000036016SPEN7381.250Carlito_syrichta
ENSHCOG00000006004si:ch1073-335m2.27181.746ENSCAPG00000013803SPEN8981.746Cavia_aperea
ENSHCOG00000006004si:ch1073-335m2.27181.746ENSCPOG00000014036SPEN6681.746Cavia_porcellus
ENSHCOG00000006004si:ch1073-335m2.28181.250ENSCCAG00000020258SPEN7081.250Cebus_capucinus
ENSHCOG00000006004si:ch1073-335m2.25871.642ENSCATG00000015079SPEN5581.250Cercocebus_atys
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSCSAG00000000841SPEN5581.250Chlorocebus_sabaeus
ENSHCOG00000006004si:ch1073-335m2.26181.250ENSCANG00000034547SPEN5481.250Colobus_angolensis_palliatus
ENSHCOG00000006004si:ch1073-335m2.28055.508ENSCGRG00001007725Spen7755.508Cricetulus_griseus_chok1gshd
ENSHCOG00000006004si:ch1073-335m2.27255.508ENSCGRG00000010581Spen7155.508Cricetulus_griseus_crigri
ENSHCOG00000006004si:ch1073-335m2.29963.536ENSCSEG00000003915-9563.536Cynoglossus_semilaevis
ENSHCOG00000006004si:ch1073-335m2.29964.168ENSCVAG00000009075si:ch1073-335m2.29664.168Cyprinodon_variegatus
ENSHCOG00000006004si:ch1073-335m2.29981.102ENSCVAG00000016346-9481.102Cyprinodon_variegatus
ENSHCOG00000006004si:ch1073-335m2.25180.952ENSDARG00000074245spen9080.952Danio_rerio
ENSHCOG00000006004si:ch1073-335m2.29951.059ENSDARG00000074332si:ch1073-335m2.29650.965Danio_rerio
ENSHCOG00000006004si:ch1073-335m2.28481.250ENSDNOG00000041948SPEN5781.250Dasypus_novemcinctus
ENSHCOG00000006004si:ch1073-335m2.28381.250ENSDORG00000023909Spen8167.059Dipodomys_ordii
ENSHCOG00000006004si:ch1073-335m2.25564.326ENSEBUG00000007307-5662.434Eptatretus_burgeri
ENSHCOG00000006004si:ch1073-335m2.26467.059ENSEASG00005015911SPEN5867.059Equus_asinus_asinus
ENSHCOG00000006004si:ch1073-335m2.28567.059ENSECAG00000008833SPEN7567.059Equus_caballus
ENSHCOG00000006004si:ch1073-335m2.25646.540ENSEEUG00000010255SPEN5546.506Erinaceus_europaeus
ENSHCOG00000006004si:ch1073-335m2.29958.397ENSELUG00000007726si:ch1073-335m2.29758.770Esox_lucius
ENSHCOG00000006004si:ch1073-335m2.28660.697ENSFDAG00000010212SPEN8760.697Fukomys_damarensis
ENSHCOG00000006004si:ch1073-335m2.29963.166ENSFHEG00000004544si:ch1073-335m2.29663.633Fundulus_heteroclitus
ENSHCOG00000006004si:ch1073-335m2.29961.212ENSGMOG00000008156si:ch1073-335m2.29661.258Gadus_morhua
ENSHCOG00000006004si:ch1073-335m2.29981.102ENSGAFG00000015819-9381.102Gambusia_affinis
ENSHCOG00000006004si:ch1073-335m2.29965.134ENSGAFG00000021570si:ch1073-335m2.29665.166Gambusia_affinis
ENSHCOG00000006004si:ch1073-335m2.29974.126ENSGACG00000005341-9473.103Gasterosteus_aculeatus
ENSHCOG00000006004si:ch1073-335m2.29967.016ENSGACG00000001176si:ch1073-335m2.29767.212Gasterosteus_aculeatus
ENSHCOG00000006004si:ch1073-335m2.29581.250ENSGAGG00000020785SPEN8766.471Gopherus_agassizii
ENSHCOG00000006004si:ch1073-335m2.28180.469ENSGGOG00000012041SPEN7180.469Gorilla_gorilla
ENSHCOG00000006004si:ch1073-335m2.29770.889ENSHBUG00000023253si:ch1073-335m2.29670.753Haplochromis_burtoni
ENSHCOG00000006004si:ch1073-335m2.29977.536ENSHBUG00000020626-9577.536Haplochromis_burtoni
ENSHCOG00000006004si:ch1073-335m2.26661.616ENSHGLG00000019259SPEN6461.616Heterocephalus_glaber_female
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSHGLG00100019294SPEN6561.616Heterocephalus_glaber_male
ENSHCOG00000006004si:ch1073-335m2.29852.464ENSIPUG00000018212si:ch1073-335m2.29852.821Ictalurus_punctatus
ENSHCOG00000006004si:ch1073-335m2.29980.159ENSIPUG00000021668spen9380.159Ictalurus_punctatus
ENSHCOG00000006004si:ch1073-335m2.26661.111ENSSTOG00000021428SPEN8161.111Ictidomys_tridecemlineatus
ENSHCOG00000006004si:ch1073-335m2.28659.701ENSJJAG00000010882Spen8559.701Jaculus_jaculus
ENSHCOG00000006004si:ch1073-335m2.29966.561ENSKMAG00000021725si:ch1073-335m2.29766.593Kryptolebias_marmoratus
ENSHCOG00000006004si:ch1073-335m2.29982.540ENSKMAG00000003882-9382.540Kryptolebias_marmoratus
ENSHCOG00000006004si:ch1073-335m2.27380.952ENSLBEG00000019129-9180.952Labrus_bergylta
ENSHCOG00000006004si:ch1073-335m2.29969.512ENSLBEG00000020855si:ch1073-335m2.29769.575Labrus_bergylta
ENSHCOG00000006004si:ch1073-335m2.29581.250ENSLACG00000003258SPEN8768.098Latimeria_chalumnae
ENSHCOG00000006004si:ch1073-335m2.29979.845ENSLOCG00000007896si:ch1073-335m2.28679.845Lepisosteus_oculatus
ENSHCOG00000006004si:ch1073-335m2.28567.630ENSLAFG00000004524SPEN7567.630Loxodonta_africana
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSMFAG00000041974SPEN5761.616Macaca_fascicularis
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSMMUG00000008026SPEN5581.250Macaca_mulatta
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSMNEG00000042402SPEN5761.616Macaca_nemestrina
ENSHCOG00000006004si:ch1073-335m2.26361.616ENSMLEG00000039293SPEN5581.250Mandrillus_leucophaeus
ENSHCOG00000006004si:ch1073-335m2.29971.383ENSMAMG00000023870si:ch1073-335m2.29771.415Mastacembelus_armatus
ENSHCOG00000006004si:ch1073-335m2.29177.536ENSMZEG00005021491-9677.536Maylandia_zebra
ENSHCOG00000006004si:ch1073-335m2.29967.446ENSMZEG00005011762si:ch1073-335m2.29767.573Maylandia_zebra
ENSHCOG00000006004si:ch1073-335m2.27952.239ENSMAUG00000008318Spen8652.239Mesocricetus_auratus
ENSHCOG00000006004si:ch1073-335m2.28567.647ENSMICG00000030994SPEN7567.647Microcebus_murinus
ENSHCOG00000006004si:ch1073-335m2.27861.111ENSMOCG00000016083Spen7761.111Microtus_ochrogaster
ENSHCOG00000006004si:ch1073-335m2.29968.511ENSMMOG00000021742si:ch1073-335m2.29668.479Mola_mola
ENSHCOG00000006004si:ch1073-335m2.29976.812ENSMALG00000008625-9476.812Monopterus_albus
ENSHCOG00000006004si:ch1073-335m2.27767.059MGP_CAROLIEiJ_G0026745Spen7567.059Mus_caroli
ENSHCOG00000006004si:ch1073-335m2.27679.104ENSMUSG00000040761Spen7567.647Mus_musculus
ENSHCOG00000006004si:ch1073-335m2.28568.824MGP_PahariEiJ_G0029076Spen7568.824Mus_pahari
ENSHCOG00000006004si:ch1073-335m2.27768.235MGP_SPRETEiJ_G0027724Spen7668.235Mus_spretus
ENSHCOG00000006004si:ch1073-335m2.26049.158ENSMPUG00000016317SPEN7142.455Mustela_putorius_furo
ENSHCOG00000006004si:ch1073-335m2.29362.176ENSNGAG00000000641Spen8662.176Nannospalax_galili
ENSHCOG00000006004si:ch1073-335m2.28677.536ENSNBRG00000022090-9677.536Neolamprologus_brichardi
ENSHCOG00000006004si:ch1073-335m2.29966.667ENSNBRG00000005733si:ch1073-335m2.29666.793Neolamprologus_brichardi
ENSHCOG00000006004si:ch1073-335m2.27561.111ENSNLEG00000007652SPEN7361.111Nomascus_leucogenys
ENSHCOG00000006004si:ch1073-335m2.27676.923ENSMEUG00000002422SPEN7176.923Notamacropus_eugenii
ENSHCOG00000006004si:ch1073-335m2.25781.250ENSOPRG00000015800SPEN5181.250Ochotona_princeps
ENSHCOG00000006004si:ch1073-335m2.27161.616ENSODEG00000016644SPEN6661.616Octodon_degus
ENSHCOG00000006004si:ch1073-335m2.29976.812ENSONIG00000006573-9476.812Oreochromis_niloticus
ENSHCOG00000006004si:ch1073-335m2.26560.199ENSOCUG00000010840SPEN7660.199Oryctolagus_cuniculus
ENSHCOG00000006004si:ch1073-335m2.29965.277ENSORLG00000018414si:ch1073-335m2.29765.269Oryzias_latipes
ENSHCOG00000006004si:ch1073-335m2.29965.320ENSORLG00020009351si:ch1073-335m2.29765.311Oryzias_latipes_hni
ENSHCOG00000006004si:ch1073-335m2.29965.140ENSORLG00015005537si:ch1073-335m2.29665.132Oryzias_latipes_hsok
ENSHCOG00000006004si:ch1073-335m2.25083.200ENSOMEG00000007639-9582.540Oryzias_melastigma
ENSHCOG00000006004si:ch1073-335m2.29966.052ENSOMEG00000004509si:ch1073-335m2.29766.254Oryzias_melastigma
ENSHCOG00000006004si:ch1073-335m2.26381.250ENSOGAG00000025110SPEN7267.647Otolemur_garnettii
ENSHCOG00000006004si:ch1073-335m2.28481.250ENSOARG00000008477SPEN7481.250Ovis_aries
ENSHCOG00000006004si:ch1073-335m2.27380.469ENSPPAG00000035690SPEN7280.469Pan_paniscus
ENSHCOG00000006004si:ch1073-335m2.27380.469ENSPTRG00000000210SPEN7180.469Pan_troglodytes
ENSHCOG00000006004si:ch1073-335m2.26461.616ENSPANG00000006293SPEN5581.250Papio_anubis
ENSHCOG00000006004si:ch1073-335m2.29980.620ENSPKIG00000010492si:ch1073-335m2.29580.620Paramormyrops_kingsleyae
ENSHCOG00000006004si:ch1073-335m2.29978.358ENSPKIG00000002617SPEN9478.358Paramormyrops_kingsleyae
ENSHCOG00000006004si:ch1073-335m2.28754.852ENSPEMG00000022997Spen7854.852Peromyscus_maniculatus_bairdii
ENSHCOG00000006004si:ch1073-335m2.29965.392ENSPFOG00000017986si:ch1073-335m2.29665.626Poecilia_formosa
ENSHCOG00000006004si:ch1073-335m2.29965.326ENSPLAG00000016625si:ch1073-335m2.29665.453Poecilia_latipinna
ENSHCOG00000006004si:ch1073-335m2.29981.102ENSPMEG00000006764-9381.102Poecilia_mexicana
ENSHCOG00000006004si:ch1073-335m2.29965.583ENSPMEG00000002674si:ch1073-335m2.29865.224Poecilia_mexicana
ENSHCOG00000006004si:ch1073-335m2.29964.936ENSPREG00000005357si:ch1073-335m2.29665.497Poecilia_reticulata
ENSHCOG00000006004si:ch1073-335m2.29981.102ENSPREG00000010399-9381.102Poecilia_reticulata
ENSHCOG00000006004si:ch1073-335m2.26461.111ENSPPYG00000001834SPEN5580.469Pongo_abelii
ENSHCOG00000006004si:ch1073-335m2.28056.696ENSPCAG00000009543SPEN7356.696Procavia_capensis
ENSHCOG00000006004si:ch1073-335m2.28476.744ENSPCOG00000021735SPEN7464.327Propithecus_coquereli
ENSHCOG00000006004si:ch1073-335m2.25978.906ENSPVAG00000013794SPEN5778.906Pteropus_vampyrus
ENSHCOG00000006004si:ch1073-335m2.29977.698ENSPNYG00000012379-9677.698Pundamilia_nyererei
ENSHCOG00000006004si:ch1073-335m2.29967.404ENSPNYG00000009042si:ch1073-335m2.29767.531Pundamilia_nyererei
ENSHCOG00000006004si:ch1073-335m2.29977.778ENSPNAG00000020795spen9377.778Pygocentrus_nattereri
ENSHCOG00000006004si:ch1073-335m2.29953.603ENSPNAG00000011452si:ch1073-335m2.29753.638Pygocentrus_nattereri
ENSHCOG00000006004si:ch1073-335m2.28181.250ENSRBIG00000039654SPEN7281.250Rhinopithecus_bieti
ENSHCOG00000006004si:ch1073-335m2.28181.395ENSRROG00000035686SPEN7381.250Rhinopithecus_roxellana
ENSHCOG00000006004si:ch1073-335m2.28181.250ENSSBOG00000028770SPEN7481.250Saimiri_boliviensis_boliviensis
ENSHCOG00000006004si:ch1073-335m2.27079.389ENSSHAG00000004960SPEN9067.213Sarcophilus_harrisii
ENSHCOG00000006004si:ch1073-335m2.29976.761ENSSFOG00015010267si:ch1073-335m2.29576.761Scleropages_formosus
ENSHCOG00000006004si:ch1073-335m2.28982.812ENSSFOG00015007131si:ch1073-335m2.29582.540Scleropages_formosus
ENSHCOG00000006004si:ch1073-335m2.29970.900ENSSMAG00000000125si:ch1073-335m2.29771.027Scophthalmus_maximus
ENSHCOG00000006004si:ch1073-335m2.29977.536ENSSMAG00000008996-9477.536Scophthalmus_maximus
ENSHCOG00000006004si:ch1073-335m2.29977.536ENSSDUG00000003476-9577.536Seriola_dumerili
ENSHCOG00000006004si:ch1073-335m2.29973.581ENSSDUG00000008416si:ch1073-335m2.29773.619Seriola_dumerili
ENSHCOG00000006004si:ch1073-335m2.29970.542ENSSLDG00000023347si:ch1073-335m2.29670.605Seriola_lalandi_dorsalis
ENSHCOG00000006004si:ch1073-335m2.29977.536ENSSLDG00000012950-9477.536Seriola_lalandi_dorsalis
ENSHCOG00000006004si:ch1073-335m2.28563.874ENSSPUG00000001866-8963.874Sphenodon_punctatus
ENSHCOG00000006004si:ch1073-335m2.29972.624ENSSPAG00000012454si:ch1073-335m2.29772.624Stegastes_partitus
ENSHCOG00000006004si:ch1073-335m2.29981.746ENSSPAG00000006014-9381.746Stegastes_partitus
ENSHCOG00000006004si:ch1073-335m2.27743.341ENSSSCG00000034484SPEN8043.511Sus_scrofa
ENSHCOG00000006004si:ch1073-335m2.29975.172ENSTRUG00000024350-9475.172Takifugu_rubripes
ENSHCOG00000006004si:ch1073-335m2.28963.284ENSTRUG00000021008si:ch1073-335m2.29863.495Takifugu_rubripes
ENSHCOG00000006004si:ch1073-335m2.29975.862ENSTNIG00000010907-9375.862Tetraodon_nigroviridis
ENSHCOG00000006004si:ch1073-335m2.29965.338ENSTNIG00000014666si:ch1073-335m2.29765.433Tetraodon_nigroviridis
ENSHCOG00000006004si:ch1073-335m2.25381.250ENSTBEG00000003628SPEN5681.250Tupaia_belangeri
ENSHCOG00000006004si:ch1073-335m2.27181.250ENSTTRG00000015704SPEN6481.250Tursiops_truncatus
ENSHCOG00000006004si:ch1073-335m2.26049.523ENSUAMG00000009600SPEN7042.882Ursus_americanus
ENSHCOG00000006004si:ch1073-335m2.26481.250ENSUMAG00000021641SPEN7665.730Ursus_maritimus
ENSHCOG00000006004si:ch1073-335m2.28581.250ENSVVUG00000028951SPEN7581.250Vulpes_vulpes
ENSHCOG00000006004si:ch1073-335m2.29963.677ENSXCOG00000004516si:ch1073-335m2.29663.950Xiphophorus_couchianus
ENSHCOG00000006004si:ch1073-335m2.29965.614ENSXMAG00000029887si:ch1073-335m2.29665.847Xiphophorus_maculatus
ENSHCOG00000006004si:ch1073-335m2.29980.315ENSXMAG00000021384-9380.315Xiphophorus_maculatus

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