EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006067 (Gene tree)
Gene ID: 109517631
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8902 bases
Position: chrKV880006.1:2574258-2583159
Accession: 109517631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020192	KH_1	PF00013.29	1.1e-54	1	3
ENSHCOP00000020192	KH_1	PF00013.29	1.1e-54	2	3
ENSHCOP00000020192	KH_1	PF00013.29	1.1e-54	3	3
ENSHCOP00000020192	KH_2	PF07650.17	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006803	-	939	XM_019872909	ENSHCOP00000020192	312 (aa)	XP_019728468	-

Gene Model

Click here to download ENSHCOG00000006067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006067	-	93	35.211	ENSHCOG00000000578	igf2bp3	62	35.211
ENSHCOG00000006067	-	91	35.821	ENSHCOG00000003639	FUBP3	66	35.821
ENSHCOG00000006067	-	92	38.028	ENSHCOG00000019136	-	51	38.028
ENSHCOG00000006067	-	67	40.625	ENSHCOG00000020488	khsrp	59	40.625
ENSHCOG00000006067	-	97	77.483	ENSHCOG00000020951	PCBP2	97	77.483
ENSHCOG00000006067	-	94	30.201	ENSHCOG00000021170	-	63	30.201
ENSHCOG00000006067	-	98	66.346	ENSHCOG00000000818	zgc:110045	100	66.346
ENSHCOG00000006067	-	77	53.968	ENSHCOG00000011097	hnrnpk	57	53.968
ENSHCOG00000006067	-	99	58.610	ENSHCOG00000010838	-	75	57.807
ENSHCOG00000006067	-	74	53.968	ENSHCOG00000019870	hnrpkl	52	53.968
ENSHCOG00000006067	-	99	73.955	ENSHCOG00000019886	pcbp2	99	73.955
ENSHCOG00000006067	-	92	33.813	ENSHCOG00000018090	igf2bp2b	64	34.940
ENSHCOG00000006067	-	92	38.596	ENSHCOG00000008366	nova1	52	39.437
ENSHCOG00000006067	-	97	86.228	ENSHCOG00000017868	pcbp3	95	86.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006067	-	97	93.569	ENSAPOG00000016582	-	100	90.184	Acanthochromis_polyacanthus
ENSHCOG00000006067	-	99	88.050	ENSAPOG00000020003	pcbp3	89	88.050	Acanthochromis_polyacanthus
ENSHCOG00000006067	-	98	87.387	ENSAMEG00000001697	-	99	83.573	Ailuropoda_melanoleuca
ENSHCOG00000006067	-	99	82.941	ENSACIG00000010933	pcbp3	99	82.911	Amphilophus_citrinellus
ENSHCOG00000006067	-	100	89.329	ENSACIG00000002739	-	100	89.329	Amphilophus_citrinellus
ENSHCOG00000006067	-	96	92.258	ENSAOCG00000008592	-	98	92.258	Amphiprion_ocellaris
ENSHCOG00000006067	-	95	90.068	ENSAOCG00000007806	-	100	90.068	Amphiprion_ocellaris
ENSHCOG00000006067	-	97	85.417	ENSAPEG00000008011	pcbp3	95	85.417	Amphiprion_percula
ENSHCOG00000006067	-	100	91.900	ENSAPEG00000005209	-	100	91.900	Amphiprion_percula
ENSHCOG00000006067	-	96	83.784	ENSATEG00000015787	-	100	83.784	Anabas_testudineus
ENSHCOG00000006067	-	100	91.277	ENSATEG00000009833	-	100	91.277	Anabas_testudineus
ENSHCOG00000006067	-	95	72.159	ENSAPLG00000008951	-	79	60.563	Anas_platyrhynchos
ENSHCOG00000006067	-	98	88.720	ENSAPLG00000002975	-	98	88.720	Anas_platyrhynchos
ENSHCOG00000006067	-	98	82.073	ENSACAG00000004607	-	99	82.073	Anolis_carolinensis
ENSHCOG00000006067	-	98	80.357	ENSACAG00000009819	-	98	80.357	Anolis_carolinensis
ENSHCOG00000006067	-	95	90.756	ENSANAG00000030702	-	100	90.756	Aotus_nancymaae
ENSHCOG00000006067	-	100	93.146	ENSACLG00000003801	-	100	93.146	Astatotilapia_calliptera
ENSHCOG00000006067	-	99	83.768	ENSACLG00000011835	pcbp3	98	83.768	Astatotilapia_calliptera
ENSHCOG00000006067	-	95	66.970	ENSAMXG00000001760	zgc:110045	72	66.970	Astyanax_mexicanus
ENSHCOG00000006067	-	97	86.826	ENSAMXG00000003440	pcbp3	95	86.826	Astyanax_mexicanus
ENSHCOG00000006067	-	96	88.026	ENSAMXG00000013588	-	100	88.026	Astyanax_mexicanus
ENSHCOG00000006067	-	91	92.228	ENSCAFG00020019472	-	85	88.430	Canis_lupus_dingo
ENSHCOG00000006067	-	98	92.994	ENSCSAG00000007440	-	89	92.994	Chlorocebus_sabaeus
ENSHCOG00000006067	-	95	93.421	ENSCPBG00000012151	-	99	87.425	Chrysemys_picta_bellii
ENSHCOG00000006067	-	95	80.368	ENSCPBG00000000733	-	72	80.368	Chrysemys_picta_bellii
ENSHCOG00000006067	-	93	95.431	ENSCSEG00000000822	pcbp3	99	88.710	Cynoglossus_semilaevis
ENSHCOG00000006067	-	100	74.640	ENSCSEG00000016984	-	94	81.435	Cynoglossus_semilaevis
ENSHCOG00000006067	-	97	85.970	ENSCVAG00000014482	pcbp3	95	85.970	Cyprinodon_variegatus
ENSHCOG00000006067	-	100	93.458	ENSCVAG00000005262	-	100	93.458	Cyprinodon_variegatus
ENSHCOG00000006067	-	93	97.970	ENSDARG00000054378	pcbp3	100	87.500	Danio_rerio
ENSHCOG00000006067	-	98	78.981	ENSETEG00000015988	-	98	78.981	Echinops_telfairi
ENSHCOG00000006067	-	91	85.340	ENSEBUG00000007485	-	80	85.340	Eptatretus_burgeri
ENSHCOG00000006067	-	95	69.892	ENSEBUG00000016192	pcbp3	99	69.892	Eptatretus_burgeri
ENSHCOG00000006067	-	91	66.667	ENSEBUG00000005495	pcbp3	75	66.667	Eptatretus_burgeri
ENSHCOG00000006067	-	97	85.460	ENSELUG00000003521	pcbp3	98	83.648	Esox_lucius
ENSHCOG00000006067	-	97	92.926	ENSELUG00000001560	-	99	80.282	Esox_lucius
ENSHCOG00000006067	-	95	72.443	ENSFALG00000004411	-	74	60.845	Ficedula_albicollis
ENSHCOG00000006067	-	98	92.652	ENSFALG00000003949	-	98	92.652	Ficedula_albicollis
ENSHCOG00000006067	-	97	89.744	ENSFHEG00000016615	pcbp3	96	89.744	Fundulus_heteroclitus
ENSHCOG00000006067	-	100	91.277	ENSFHEG00000006539	-	100	91.277	Fundulus_heteroclitus
ENSHCOG00000006067	-	95	65.957	ENSGMOG00000008611	-	99	65.957	Gadus_morhua
ENSHCOG00000006067	-	97	78.593	ENSGMOG00000011992	pcbp3	97	77.914	Gadus_morhua
ENSHCOG00000006067	-	97	79.228	ENSGALG00000013155	-	99	77.177	Gallus_gallus
ENSHCOG00000006067	-	98	80.337	ENSGALG00000004394	-	94	87.429	Gallus_gallus
ENSHCOG00000006067	-	100	80.523	ENSGAFG00000011430	pcbp3	99	80.523	Gambusia_affinis
ENSHCOG00000006067	-	97	93.248	ENSGAFG00000010274	-	95	93.248	Gambusia_affinis
ENSHCOG00000006067	-	100	86.550	ENSGACG00000002266	-	100	86.550	Gasterosteus_aculeatus
ENSHCOG00000006067	-	100	75.207	ENSGACG00000014955	-	100	75.207	Gasterosteus_aculeatus
ENSHCOG00000006067	-	91	85.338	ENSGAGG00000000271	-	100	85.338	Gopherus_agassizii
ENSHCOG00000006067	-	79	87.500	ENSGAGG00000006956	-	77	87.500	Gopherus_agassizii
ENSHCOG00000006067	-	100	93.146	ENSHBUG00000021782	-	100	93.146	Haplochromis_burtoni
ENSHCOG00000006067	-	96	89.644	ENSHBUG00000010697	pcbp3	98	89.644	Haplochromis_burtoni
ENSHCOG00000006067	-	100	90.654	ENSIPUG00000006238	pcbp3	100	90.654	Ictalurus_punctatus
ENSHCOG00000006067	-	97	92.283	ENSKMAG00000018530	-	100	88.146	Kryptolebias_marmoratus
ENSHCOG00000006067	-	97	85.417	ENSKMAG00000003046	pcbp3	95	85.417	Kryptolebias_marmoratus
ENSHCOG00000006067	-	100	87.539	ENSLBEG00000006201	pcbp3	99	87.539	Labrus_bergylta
ENSHCOG00000006067	-	100	80.982	ENSLBEG00000006542	-	100	81.595	Labrus_bergylta
ENSHCOG00000006067	-	95	79.429	ENSLACG00000010386	pcbp3	74	79.429	Latimeria_chalumnae
ENSHCOG00000006067	-	95	73.926	ENSLACG00000010804	zgc:110045	74	69.801	Latimeria_chalumnae
ENSHCOG00000006067	-	98	87.126	ENSLOCG00000009369	pcbp3	99	87.126	Lepisosteus_oculatus
ENSHCOG00000006067	-	95	79.755	ENSLOCG00000005058	zgc:110045	80	79.755	Lepisosteus_oculatus
ENSHCOG00000006067	-	96	89.968	ENSMAMG00000022336	pcbp3	93	89.968	Mastacembelus_armatus
ENSHCOG00000006067	-	100	90.343	ENSMAMG00000011620	-	100	90.343	Mastacembelus_armatus
ENSHCOG00000006067	-	97	87.578	ENSMZEG00005014882	-	100	83.429	Maylandia_zebra
ENSHCOG00000006067	-	92	91.753	ENSMZEG00005008993	pcbp3	98	83.483	Maylandia_zebra
ENSHCOG00000006067	-	95	72.443	ENSMGAG00000006794	-	74	65.537	Meleagris_gallopavo
ENSHCOG00000006067	-	94	77.101	ENSMGAG00000001883	-	95	77.391	Meleagris_gallopavo
ENSHCOG00000006067	-	96	89.068	ENSMMOG00000000730	pcbp3	88	89.068	Mola_mola
ENSHCOG00000006067	-	100	90.343	ENSMMOG00000005216	-	100	90.343	Mola_mola
ENSHCOG00000006067	-	70	71.963	ENSMODG00000027884	-	93	71.963	Monodelphis_domestica
ENSHCOG00000006067	-	97	86.557	ENSMALG00000000691	pcbp3	98	86.557	Monopterus_albus
ENSHCOG00000006067	-	98	81.081	ENSMPUG00000001779	-	90	81.081	Mustela_putorius_furo
ENSHCOG00000006067	-	99	82.456	ENSNBRG00000016409	-	98	82.456	Neolamprologus_brichardi
ENSHCOG00000006067	-	98	86.707	ENSNBRG00000016714	-	99	87.009	Neolamprologus_brichardi
ENSHCOG00000006067	-	94	79.651	ENSOPRG00000003431	-	99	79.651	Ochotona_princeps
ENSHCOG00000006067	-	100	93.146	ENSONIG00000004611	-	100	93.146	Oreochromis_niloticus
ENSHCOG00000006067	-	96	81.534	ENSONIG00000012122	-	98	81.534	Oreochromis_niloticus
ENSHCOG00000006067	-	98	92.652	ENSOCUG00000002696	-	89	92.652	Oryctolagus_cuniculus
ENSHCOG00000006067	-	100	93.769	ENSORLG00000022739	-	100	93.769	Oryzias_latipes
ENSHCOG00000006067	-	96	92.258	ENSORLG00000000059	pcbp3	100	92.258	Oryzias_latipes
ENSHCOG00000006067	-	96	92.258	ENSORLG00020012671	pcbp3	97	92.258	Oryzias_latipes_hni
ENSHCOG00000006067	-	100	93.769	ENSORLG00020006124	-	100	93.769	Oryzias_latipes_hni
ENSHCOG00000006067	-	96	92.258	ENSORLG00015000429	pcbp3	97	92.258	Oryzias_latipes_hsok
ENSHCOG00000006067	-	99	92.188	ENSORLG00015008051	-	98	92.188	Oryzias_latipes_hsok
ENSHCOG00000006067	-	100	93.146	ENSOMEG00000020162	-	100	93.146	Oryzias_melastigma
ENSHCOG00000006067	-	92	91.103	ENSOMEG00000020811	pcbp3	97	91.103	Oryzias_melastigma
ENSHCOG00000006067	-	98	80.501	ENSOGAG00000008044	-	99	80.501	Otolemur_garnettii
ENSHCOG00000006067	-	100	90.031	ENSPKIG00000019329	pcbp3	100	90.031	Paramormyrops_kingsleyae
ENSHCOG00000006067	-	79	84.656	ENSPKIG00000020913	-	81	84.656	Paramormyrops_kingsleyae
ENSHCOG00000006067	-	88	76.735	ENSPSIG00000008350	-	68	76.735	Pelodiscus_sinensis
ENSHCOG00000006067	-	98	79.456	ENSPSIG00000014970	-	98	80.060	Pelodiscus_sinensis
ENSHCOG00000006067	-	96	85.843	ENSPMGG00000022383	pcbp3	95	85.843	Periophthalmus_magnuspinnatus
ENSHCOG00000006067	-	91	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSHCOG00000006067	-	96	70.701	ENSPMAG00000004551	pcbp3	90	70.701	Petromyzon_marinus
ENSHCOG00000006067	-	91	97.340	ENSPCIG00000028092	-	99	86.647	Phascolarctos_cinereus
ENSHCOG00000006067	-	99	88.146	ENSPLAG00000004074	-	92	88.146	Poecilia_latipinna
ENSHCOG00000006067	-	100	76.584	ENSPLAG00000011449	pcbp3	91	76.584	Poecilia_latipinna
ENSHCOG00000006067	-	97	87.346	ENSPMEG00000006653	-	99	86.136	Poecilia_mexicana
ENSHCOG00000006067	-	93	89.447	ENSPMEG00000021239	pcbp3	95	85.119	Poecilia_mexicana
ENSHCOG00000006067	-	93	97.949	ENSPREG00000020585	-	100	90.654	Poecilia_reticulata
ENSHCOG00000006067	-	96	87.500	ENSPREG00000015736	pcbp3	99	87.500	Poecilia_reticulata
ENSHCOG00000006067	-	96	89.355	ENSPNYG00000012326	pcbp3	95	89.355	Pundamilia_nyererei
ENSHCOG00000006067	-	100	90.654	ENSPNYG00000013205	-	100	90.654	Pundamilia_nyererei
ENSHCOG00000006067	-	100	93.146	ENSPNAG00000015104	pcbp3	100	93.146	Pygocentrus_nattereri
ENSHCOG00000006067	-	96	87.987	ENSPNAG00000008541	-	98	87.987	Pygocentrus_nattereri
ENSHCOG00000006067	-	98	92.675	ENSRNOG00000001245	Pcbp3	98	92.675	Rattus_norvegicus
ENSHCOG00000006067	-	98	81.595	ENSRBIG00000028177	-	99	72.826	Rhinopithecus_bieti
ENSHCOG00000006067	-	98	87.387	ENSSHAG00000007890	-	99	87.387	Sarcophilus_harrisii
ENSHCOG00000006067	-	94	82.060	ENSSFOG00015007118	-	93	82.060	Scleropages_formosus
ENSHCOG00000006067	-	97	86.186	ENSSFOG00015014706	pcbp3	95	86.186	Scleropages_formosus
ENSHCOG00000006067	-	97	93.226	ENSSFOG00015010205	pcbp3	95	93.226	Scleropages_formosus
ENSHCOG00000006067	-	96	89.677	ENSSMAG00000011929	pcbp3	97	89.677	Scophthalmus_maximus
ENSHCOG00000006067	-	100	92.835	ENSSMAG00000003135	-	100	92.835	Scophthalmus_maximus
ENSHCOG00000006067	-	97	91.401	ENSSDUG00000008502	-	95	91.401	Seriola_dumerili
ENSHCOG00000006067	-	96	83.832	ENSSDUG00000011608	pcbp3	99	83.832	Seriola_dumerili
ENSHCOG00000006067	-	97	93.569	ENSSLDG00000020161	-	95	93.569	Seriola_lalandi_dorsalis
ENSHCOG00000006067	-	96	83.832	ENSSLDG00000008518	pcbp3	99	83.832	Seriola_lalandi_dorsalis
ENSHCOG00000006067	-	91	88.710	ENSSPUG00000013214	-	84	88.710	Sphenodon_punctatus
ENSHCOG00000006067	-	95	90.411	ENSSPAG00000004190	-	100	90.411	Stegastes_partitus
ENSHCOG00000006067	-	97	73.414	ENSSPAG00000023341	-	95	73.112	Stegastes_partitus
ENSHCOG00000006067	-	98	85.987	ENSTGUG00000008158	-	99	85.987	Taeniopygia_guttata
ENSHCOG00000006067	-	98	83.832	ENSTGUG00000003316	-	99	83.832	Taeniopygia_guttata
ENSHCOG00000006067	-	93	97.462	ENSTRUG00000013604	pcbp3	86	97.462	Takifugu_rubripes
ENSHCOG00000006067	-	95	93.750	ENSTRUG00000006280	-	92	93.750	Takifugu_rubripes
ENSHCOG00000006067	-	98	80.899	ENSTTRG00000015075	-	99	81.461	Tursiops_truncatus
ENSHCOG00000006067	-	98	85.329	ENSXETG00000011483	pcbp1	99	85.329	Xenopus_tropicalis
ENSHCOG00000006067	-	92	70.710	ENSXETG00000010491	pcbp2	74	67.160	Xenopus_tropicalis
ENSHCOG00000006067	-	96	85.119	ENSXCOG00000020481	pcbp3	95	85.119	Xiphophorus_couchianus
ENSHCOG00000006067	-	97	85.417	ENSXMAG00000008175	pcbp3	95	85.417	Xiphophorus_maculatus
ENSHCOG00000006067	-	97	93.569	ENSXMAG00000028711	-	95	93.569	Xiphophorus_maculatus