EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006106 (Gene tree)
Gene ID: 109528299
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8427 bases
Position: chrKV880338.1:2728189-2736615
Accession: 109528299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020226	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006722	-	1816	XM_019890685	ENSHCOP00000020226	383 (aa)	XP_019746244	-

Gene Model

Click here to download ENSHCOG00000006106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006106	arl13b	74	41.379	ENSHCOG00000005206	arl13a	67	39.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006106	arl13b	99	83.117	ENSAPOG00000013256	arl13b	94	82.857	Acanthochromis_polyacanthus
ENSHCOG00000006106	arl13b	99	81.316	ENSACIG00000017582	arl13b	95	96.087	Amphilophus_citrinellus
ENSHCOG00000006106	arl13b	99	82.857	ENSAOCG00000002828	arl13b	95	82.065	Amphiprion_ocellaris
ENSHCOG00000006106	arl13b	100	82.262	ENSAPEG00000014654	arl13b	100	82.519	Amphiprion_percula
ENSHCOG00000006106	arl13b	95	81.081	ENSATEG00000017586	arl13b	96	81.622	Anabas_testudineus
ENSHCOG00000006106	arl13b	98	60.337	ENSACAG00000000523	ARL13B	99	61.017	Anolis_carolinensis
ENSHCOG00000006106	arl13b	99	77.836	ENSACLG00000024227	arl13b	86	95.050	Astatotilapia_calliptera
ENSHCOG00000006106	arl13b	100	74.619	ENSAMXG00000042824	arl13b	100	76.154	Astyanax_mexicanus
ENSHCOG00000006106	arl13b	93	58.217	ENSCAPG00000006764	ARL13B	86	58.496	Cavia_aperea
ENSHCOG00000006106	arl13b	97	57.796	ENSCPOG00000002558	ARL13B	91	57.258	Cavia_porcellus
ENSHCOG00000006106	arl13b	93	59.126	ENSCLAG00000006379	ARL13B	93	59.126	Chinchilla_lanigera
ENSHCOG00000006106	arl13b	99	61.614	ENSCPBG00000005599	ARL13B	94	62.103	Chrysemys_picta_bellii
ENSHCOG00000006106	arl13b	100	75.959	ENSCSEG00000005258	arl13b	99	77.436	Cynoglossus_semilaevis
ENSHCOG00000006106	arl13b	99	78.701	ENSCVAG00000001545	arl13b	86	93.548	Cyprinodon_variegatus
ENSHCOG00000006106	arl13b	99	77.003	ENSDARG00000012763	arl13b	83	93.088	Danio_rerio
ENSHCOG00000006106	arl13b	70	52.612	ENSEBUG00000006528	arl13b	90	49.627	Eptatretus_burgeri
ENSHCOG00000006106	arl13b	70	76.404	ENSEEUG00000010823	ARL13B	94	56.965	Erinaceus_europaeus
ENSHCOG00000006106	arl13b	98	56.250	ENSFALG00000001654	ARL13B	99	59.000	Ficedula_albicollis
ENSHCOG00000006106	arl13b	98	61.787	ENSFDAG00000006556	ARL13B	94	61.787	Fukomys_damarensis
ENSHCOG00000006106	arl13b	100	76.093	ENSFHEG00000016049	arl13b	100	76.093	Fundulus_heteroclitus
ENSHCOG00000006106	arl13b	94	69.444	ENSGMOG00000018628	arl13b	93	69.444	Gadus_morhua
ENSHCOG00000006106	arl13b	99	76.440	ENSGAFG00000000025	arl13b	81	93.088	Gambusia_affinis
ENSHCOG00000006106	arl13b	99	79.016	ENSGACG00000014228	arl13b	94	79.016	Gasterosteus_aculeatus
ENSHCOG00000006106	arl13b	99	61.125	ENSGAGG00000019336	ARL13B	94	60.197	Gopherus_agassizii
ENSHCOG00000006106	arl13b	99	81.890	ENSHBUG00000020619	arl13b	94	82.152	Haplochromis_burtoni
ENSHCOG00000006106	arl13b	99	80.315	ENSKMAG00000001122	arl13b	93	80.315	Kryptolebias_marmoratus
ENSHCOG00000006106	arl13b	99	78.701	ENSLBEG00000014612	arl13b	95	78.533	Labrus_bergylta
ENSHCOG00000006106	arl13b	99	68.116	ENSLOCG00000010465	arl13b	94	68.990	Lepisosteus_oculatus
ENSHCOG00000006106	arl13b	99	83.636	ENSMAMG00000021452	arl13b	95	83.152	Mastacembelus_armatus
ENSHCOG00000006106	arl13b	99	82.152	ENSMZEG00005017827	arl13b	94	82.415	Maylandia_zebra
ENSHCOG00000006106	arl13b	99	80.211	ENSMMOG00000010253	arl13b	94	79.947	Mola_mola
ENSHCOG00000006106	arl13b	99	71.316	ENSMALG00000014655	arl13b	93	72.895	Monopterus_albus
ENSHCOG00000006106	arl13b	98	60.891	MGP_CAROLIEiJ_G0020856	Arl13b	94	62.438	Mus_caroli
ENSHCOG00000006106	arl13b	98	59.753	ENSMUSG00000022911	Arl13b	94	60.794	Mus_musculus
ENSHCOG00000006106	arl13b	98	61.139	MGP_PahariEiJ_G0016561	Arl13b	94	62.035	Mus_pahari
ENSHCOG00000006106	arl13b	98	60.000	MGP_SPRETEiJ_G0021763	Arl13b	94	60.741	Mus_spretus
ENSHCOG00000006106	arl13b	93	60.938	ENSMLUG00000017473	ARL13B	90	60.938	Myotis_lucifugus
ENSHCOG00000006106	arl13b	99	77.309	ENSNBRG00000004078	arl13b	92	96.070	Neolamprologus_brichardi
ENSHCOG00000006106	arl13b	98	59.801	ENSNLEG00000001772	ARL13B	94	59.801	Nomascus_leucogenys
ENSHCOG00000006106	arl13b	65	65.323	ENSMEUG00000008036	-	74	65.323	Notamacropus_eugenii
ENSHCOG00000006106	arl13b	98	60.546	ENSODEG00000011381	ARL13B	94	60.794	Octodon_degus
ENSHCOG00000006106	arl13b	99	77.017	ENSONIG00000001864	arl13b	94	77.506	Oreochromis_niloticus
ENSHCOG00000006106	arl13b	99	79.737	ENSORLG00000006350	arl13b	86	95.392	Oryzias_latipes
ENSHCOG00000006106	arl13b	99	79.737	ENSORLG00020013754	arl13b	94	79.737	Oryzias_latipes_hni
ENSHCOG00000006106	arl13b	99	79.211	ENSORLG00015012586	arl13b	94	79.211	Oryzias_latipes_hsok
ENSHCOG00000006106	arl13b	57	91.244	ENSOMEG00000010187	arl13b	84	91.244	Oryzias_melastigma
ENSHCOG00000006106	arl13b	99	61.029	ENSPSIG00000018115	ARL13B	99	61.520	Pelodiscus_sinensis
ENSHCOG00000006106	arl13b	99	82.199	ENSPMGG00000004584	arl13b	93	82.723	Periophthalmus_magnuspinnatus
ENSHCOG00000006106	arl13b	97	48.157	ENSPCIG00000026984	ARL13B	91	46.192	Phascolarctos_cinereus
ENSHCOG00000006106	arl13b	99	77.105	ENSPFOG00000005379	arl13b	94	76.883	Poecilia_formosa
ENSHCOG00000006106	arl13b	100	76.823	ENSPLAG00000008699	arl13b	100	76.607	Poecilia_latipinna
ENSHCOG00000006106	arl13b	95	75.956	ENSPMEG00000015387	arl13b	93	76.359	Poecilia_mexicana
ENSHCOG00000006106	arl13b	99	77.632	ENSPREG00000006291	arl13b	95	78.158	Poecilia_reticulata
ENSHCOG00000006106	arl13b	94	77.222	ENSPNYG00000022879	arl13b	91	76.944	Pundamilia_nyererei
ENSHCOG00000006106	arl13b	99	75.389	ENSPNAG00000003803	arl13b	96	75.389	Pygocentrus_nattereri
ENSHCOG00000006106	arl13b	56	72.222	ENSSFOG00015023057	arl13b	85	72.222	Scleropages_formosus
ENSHCOG00000006106	arl13b	59	84.000	ENSSFOG00015005491	arl13b	84	84.259	Scleropages_formosus
ENSHCOG00000006106	arl13b	99	75.452	ENSSMAG00000015450	arl13b	94	76.227	Scophthalmus_maximus
ENSHCOG00000006106	arl13b	100	83.290	ENSSDUG00000005560	arl13b	97	83.548	Seriola_dumerili
ENSHCOG00000006106	arl13b	100	83.805	ENSSLDG00000013361	arl13b	100	84.062	Seriola_lalandi_dorsalis
ENSHCOG00000006106	arl13b	98	60.848	ENSSARG00000003872	ARL13B	93	61.097	Sorex_araneus
ENSHCOG00000006106	arl13b	60	82.609	ENSSPUG00000006649	ARL13B	88	82.028	Sphenodon_punctatus
ENSHCOG00000006106	arl13b	100	83.204	ENSSPAG00000016442	arl13b	90	83.463	Stegastes_partitus
ENSHCOG00000006106	arl13b	98	58.500	ENSTGUG00000013493	ARL13B	93	59.000	Taeniopygia_guttata
ENSHCOG00000006106	arl13b	92	57.855	ENSTRUG00000013035	-	84	71.889	Takifugu_rubripes
ENSHCOG00000006106	arl13b	55	73.206	ENSTRUG00000003641	arl13b	74	71.939	Takifugu_rubripes
ENSHCOG00000006106	arl13b	90	61.957	ENSVVUG00000021511	ARL13B	93	61.316	Vulpes_vulpes
ENSHCOG00000006106	arl13b	98	61.557	ENSXETG00000032383	ARL13B	99	77.455	Xenopus_tropicalis
ENSHCOG00000006106	arl13b	70	35.294	ENSXETG00000026166	arl13a	50	40.284	Xenopus_tropicalis
ENSHCOG00000006106	arl13b	99	74.670	ENSXCOG00000016955	arl13b	93	74.670	Xiphophorus_couchianus
ENSHCOG00000006106	arl13b	100	77.344	ENSXMAG00000002089	arl13b	100	77.121	Xiphophorus_maculatus