EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006348 (Gene tree)
Gene ID: 109511697
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3846 bases
Position: chrKV879801.1:1188755-1192600
Accession: 109511697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004823	B3_4	PF03483.17	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006399	-	1707	XM_019862938	ENSHCOP00000004823	567 (aa)	XP_019718497	UPI00094EF9A8

Gene Model

Click here to download ENSHCOG00000006348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006348	lrrc47	97	54.593	ENSG00000130764	LRRC47	99	53.993	Homo_sapiens
ENSHCOG00000006348	lrrc47	98	78.712	ENSAPOG00000019553	lrrc47	100	78.354	Acanthochromis_polyacanthus
ENSHCOG00000006348	lrrc47	78	56.087	ENSAMEG00000009152	LRRC47	99	55.338	Ailuropoda_melanoleuca
ENSHCOG00000006348	lrrc47	65	63.158	ENSAPLG00000003167	LRRC47	99	63.780	Anas_platyrhynchos
ENSHCOG00000006348	lrrc47	65	59.574	ENSACAG00000008267	LRRC47	97	60.548	Anolis_carolinensis
ENSHCOG00000006348	lrrc47	97	53.299	ENSANAG00000025576	LRRC47	99	53.125	Aotus_nancymaae
ENSHCOG00000006348	lrrc47	97	53.403	ENSBTAG00000004738	LRRC47	99	54.007	Bos_taurus
ENSHCOG00000006348	lrrc47	97	54.181	ENSCAFG00000019492	LRRC47	97	53.621	Canis_familiaris
ENSHCOG00000006348	lrrc47	98	53.767	ENSCAFG00020009667	LRRC47	99	53.713	Canis_lupus_dingo
ENSHCOG00000006348	lrrc47	98	53.448	ENSCHIG00000022607	LRRC47	99	54.045	Capra_hircus
ENSHCOG00000006348	lrrc47	93	54.414	ENSTSYG00000009326	LRRC47	97	54.657	Carlito_syrichta
ENSHCOG00000006348	lrrc47	64	58.115	ENSCAPG00000016517	LRRC47	99	58.793	Cavia_aperea
ENSHCOG00000006348	lrrc47	97	51.273	ENSCPOG00000014931	LRRC47	95	52.840	Cavia_porcellus
ENSHCOG00000006348	lrrc47	97	53.299	ENSCCAG00000024895	LRRC47	99	53.125	Cebus_capucinus
ENSHCOG00000006348	lrrc47	97	54.593	ENSCATG00000029337	LRRC47	99	54.231	Cercocebus_atys
ENSHCOG00000006348	lrrc47	97	53.913	ENSCLAG00000006093	LRRC47	99	54.021	Chinchilla_lanigera
ENSHCOG00000006348	lrrc47	97	54.766	ENSCSAG00000000727	LRRC47	99	54.404	Chlorocebus_sabaeus
ENSHCOG00000006348	lrrc47	98	50.924	ENSCPBG00000019404	LRRC47	99	50.924	Chrysemys_picta_bellii
ENSHCOG00000006348	lrrc47	77	57.298	ENSCANG00000030701	LRRC47	96	56.550	Colobus_angolensis_palliatus
ENSHCOG00000006348	lrrc47	96	53.752	ENSCGRG00001015159	Lrrc47	89	53.739	Cricetulus_griseus_chok1gshd
ENSHCOG00000006348	lrrc47	64	59.574	ENSCGRG00000017336	Lrrc47	97	60.929	Cricetulus_griseus_crigri
ENSHCOG00000006348	lrrc47	99	72.807	ENSCSEG00000006217	lrrc47	98	72.456	Cynoglossus_semilaevis
ENSHCOG00000006348	lrrc47	64	59.737	ENSDORG00000016594	Lrrc47	99	59.947	Dipodomys_ordii
ENSHCOG00000006348	lrrc47	95	55.124	ENSEASG00005021788	LRRC47	97	55.379	Equus_asinus_asinus
ENSHCOG00000006348	lrrc47	95	54.947	ENSECAG00000022472	LRRC47	88	55.203	Equus_caballus
ENSHCOG00000006348	lrrc47	99	67.938	ENSELUG00000017544	lrrc47	99	67.361	Esox_lucius
ENSHCOG00000006348	lrrc47	97	51.413	ENSFCAG00000011632	LRRC47	98	51.590	Felis_catus
ENSHCOG00000006348	lrrc47	68	63.427	ENSFALG00000009631	LRRC47	98	59.226	Ficedula_albicollis
ENSHCOG00000006348	lrrc47	98	65.480	ENSGMOG00000015674	lrrc47	100	65.836	Gadus_morhua
ENSHCOG00000006348	lrrc47	96	52.212	ENSGALG00000050995	LRRC47	99	52.482	Gallus_gallus
ENSHCOG00000006348	lrrc47	98	73.036	ENSGACG00000005550	lrrc47	99	74.107	Gasterosteus_aculeatus
ENSHCOG00000006348	lrrc47	98	50.503	ENSGAGG00000022584	LRRC47	99	51.510	Gopherus_agassizii
ENSHCOG00000006348	lrrc47	97	54.766	ENSGGOG00000015571	LRRC47	99	54.167	Gorilla_gorilla
ENSHCOG00000006348	lrrc47	97	52.422	ENSHGLG00000018278	LRRC47	95	52.962	Heterocephalus_glaber_female
ENSHCOG00000006348	lrrc47	68	58.025	ENSHGLG00100008507	LRRC47	99	58.853	Heterocephalus_glaber_male
ENSHCOG00000006348	lrrc47	97	55.517	ENSSTOG00000027559	LRRC47	99	55.867	Ictidomys_tridecemlineatus
ENSHCOG00000006348	lrrc47	97	55.190	ENSJJAG00000017474	Lrrc47	97	54.389	Jaculus_jaculus
ENSHCOG00000006348	lrrc47	98	76.029	ENSKMAG00000003414	lrrc47	100	75.313	Kryptolebias_marmoratus
ENSHCOG00000006348	lrrc47	98	54.296	ENSLAFG00000011657	LRRC47	99	54.467	Loxodonta_africana
ENSHCOG00000006348	lrrc47	98	39.460	ENSMFAG00000045730	LRRC47	89	56.485	Macaca_fascicularis
ENSHCOG00000006348	lrrc47	97	53.886	ENSMNEG00000042488	LRRC47	99	54.340	Macaca_nemestrina
ENSHCOG00000006348	lrrc47	75	57.143	ENSMLEG00000043735	LRRC47	90	56.376	Mandrillus_leucophaeus
ENSHCOG00000006348	lrrc47	97	55.070	ENSMAUG00000021337	Lrrc47	98	55.342	Mesocricetus_auratus
ENSHCOG00000006348	lrrc47	97	53.913	ENSMICG00000026816	LRRC47	99	54.688	Microcebus_murinus
ENSHCOG00000006348	lrrc47	97	55.221	ENSMOCG00000021279	Lrrc47	99	55.221	Microtus_ochrogaster
ENSHCOG00000006348	lrrc47	98	74.597	ENSMMOG00000017007	lrrc47	100	75.850	Mola_mola
ENSHCOG00000006348	lrrc47	97	42.906	ENSMODG00000006554	LRRC47	98	52.910	Monodelphis_domestica
ENSHCOG00000006348	lrrc47	97	53.899	MGP_CAROLIEiJ_G0026864	Lrrc47	99	54.419	Mus_caroli
ENSHCOG00000006348	lrrc47	97	54.073	ENSMUSG00000029028	Lrrc47	99	54.593	Mus_musculus
ENSHCOG00000006348	lrrc47	97	54.720	MGP_PahariEiJ_G0029212	Lrrc47	99	54.593	Mus_pahari
ENSHCOG00000006348	lrrc47	97	53.899	MGP_SPRETEiJ_G0027857	Lrrc47	99	54.419	Mus_spretus
ENSHCOG00000006348	lrrc47	64	60.477	ENSMPUG00000007321	LRRC47	75	59.530	Mustela_putorius_furo
ENSHCOG00000006348	lrrc47	96	55.203	ENSNGAG00000022153	Lrrc47	99	54.404	Nannospalax_galili
ENSHCOG00000006348	lrrc47	97	53.484	ENSNLEG00000008131	LRRC47	99	53.310	Nomascus_leucogenys
ENSHCOG00000006348	lrrc47	82	54.082	ENSODEG00000010882	LRRC47	93	54.415	Octodon_degus
ENSHCOG00000006348	lrrc47	94	74.815	ENSORLG00000002532	lrrc47	100	75.000	Oryzias_latipes
ENSHCOG00000006348	lrrc47	98	75.134	ENSORLG00020019601	lrrc47	100	75.313	Oryzias_latipes_hni
ENSHCOG00000006348	lrrc47	98	75.134	ENSORLG00015014040	lrrc47	100	75.313	Oryzias_latipes_hsok
ENSHCOG00000006348	lrrc47	98	75.313	ENSOMEG00000008989	lrrc47	100	75.492	Oryzias_melastigma
ENSHCOG00000006348	lrrc47	97	54.957	ENSOGAG00000001553	LRRC47	99	54.957	Otolemur_garnettii
ENSHCOG00000006348	lrrc47	97	52.182	ENSOARG00000015290	LRRC47	99	52.787	Ovis_aries
ENSHCOG00000006348	lrrc47	74	58.716	ENSPPAG00000036370	-	98	57.931	Pan_paniscus
ENSHCOG00000006348	lrrc47	97	52.595	ENSPPRG00000005261	LRRC47	98	53.136	Panthera_pardus
ENSHCOG00000006348	lrrc47	97	54.593	ENSPTRG00000000068	LRRC47	99	53.993	Pan_troglodytes
ENSHCOG00000006348	lrrc47	97	54.766	ENSPANG00000012437	LRRC47	99	54.404	Papio_anubis
ENSHCOG00000006348	lrrc47	64	61.905	ENSPSIG00000004196	LRRC47	99	61.905	Pelodiscus_sinensis
ENSHCOG00000006348	lrrc47	64	62.366	ENSPEMG00000021068	Lrrc47	99	61.640	Peromyscus_maniculatus_bairdii
ENSHCOG00000006348	lrrc47	96	54.130	ENSPCIG00000003638	LRRC47	98	54.130	Phascolarctos_cinereus
ENSHCOG00000006348	lrrc47	92	74.427	ENSPFOG00000000992	lrrc47	94	74.237	Poecilia_formosa
ENSHCOG00000006348	lrrc47	98	75.135	ENSPLAG00000008077	lrrc47	100	74.955	Poecilia_latipinna
ENSHCOG00000006348	lrrc47	98	74.640	ENSPMEG00000007367	lrrc47	100	74.101	Poecilia_mexicana
ENSHCOG00000006348	lrrc47	97	54.593	ENSPPYG00000001960	LRRC47	99	53.993	Pongo_abelii
ENSHCOG00000006348	lrrc47	97	54.087	ENSPCOG00000019161	LRRC47	99	54.261	Propithecus_coquereli
ENSHCOG00000006348	lrrc47	95	54.707	ENSPVAG00000009839	LRRC47	97	54.690	Pteropus_vampyrus
ENSHCOG00000006348	lrrc47	98	63.345	ENSPNAG00000017982	lrrc47	99	64.235	Pygocentrus_nattereri
ENSHCOG00000006348	lrrc47	98	54.419	ENSRNOG00000024796	Lrrc47	99	54.419	Rattus_norvegicus
ENSHCOG00000006348	lrrc47	97	54.766	ENSRBIG00000019437	LRRC47	99	54.404	Rhinopithecus_bieti
ENSHCOG00000006348	lrrc47	97	54.766	ENSRROG00000043182	LRRC47	99	54.404	Rhinopithecus_roxellana
ENSHCOG00000006348	lrrc47	77	57.301	ENSSBOG00000026334	LRRC47	92	57.080	Saimiri_boliviensis_boliviensis
ENSHCOG00000006348	lrrc47	96	48.517	ENSSHAG00000007360	LRRC47	98	48.527	Sarcophilus_harrisii
ENSHCOG00000006348	lrrc47	98	77.679	ENSSMAG00000009344	lrrc47	100	77.143	Scophthalmus_maximus
ENSHCOG00000006348	lrrc47	98	78.533	ENSSDUG00000014618	lrrc47	100	77.818	Seriola_dumerili
ENSHCOG00000006348	lrrc47	98	78.712	ENSSLDG00000018908	lrrc47	100	77.996	Seriola_lalandi_dorsalis
ENSHCOG00000006348	lrrc47	96	52.151	ENSSPUG00000010277	LRRC47	98	53.253	Sphenodon_punctatus
ENSHCOG00000006348	lrrc47	98	79.606	ENSSPAG00000005188	lrrc47	100	79.249	Stegastes_partitus
ENSHCOG00000006348	lrrc47	97	54.609	ENSSSCG00000039516	LRRC47	98	54.498	Sus_scrofa
ENSHCOG00000006348	lrrc47	69	62.278	ENSTGUG00000002737	LRRC47	98	59.360	Taeniopygia_guttata
ENSHCOG00000006348	lrrc47	98	75.856	ENSTRUG00000017696	lrrc47	100	76.036	Takifugu_rubripes
ENSHCOG00000006348	lrrc47	98	75.000	ENSTNIG00000010923	lrrc47	99	75.000	Tetraodon_nigroviridis
ENSHCOG00000006348	lrrc47	97	53.299	ENSTTRG00000011751	LRRC47	99	53.103	Tursiops_truncatus
ENSHCOG00000006348	lrrc47	87	54.826	ENSUAMG00000012080	LRRC47	98	54.198	Ursus_americanus
ENSHCOG00000006348	lrrc47	64	60.477	ENSUMAG00000010781	LRRC47	80	59.269	Ursus_maritimus
ENSHCOG00000006348	lrrc47	95	51.423	ENSVVUG00000027118	LRRC47	96	50.880	Vulpes_vulpes
ENSHCOG00000006348	lrrc47	95	55.797	ENSXETG00000006029	lrrc47	97	56.341	Xenopus_tropicalis
ENSHCOG00000006348	lrrc47	97	74.909	ENSXCOG00000002813	lrrc47	98	75.046	Xiphophorus_couchianus
ENSHCOG00000006348	lrrc47	96	75.228	ENSXMAG00000019386	lrrc47	99	75.228	Xiphophorus_maculatus