EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006415 (Gene tree)
Gene ID: 109532587
Gene Symbol: xpot
Alias: si:ch211-286m4.4
Full Name: exportin for tRNA
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 7884 bases
Position: chrKV880455.1:228433-236316
Accession: 109532587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020365	Xpo1	PF08389.12	2.4e-40	1	1
ENSHCOP00000004841	Xpo1	PF08389.12	8.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006354	-	3488	XM_019897471	ENSHCOP00000020365	962 (aa)	XP_019753030	UPI00094F27AA
ENSHCOT00000006373	-	1500	-	ENSHCOP00000004841	499 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000006415's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006415	xpot	99	72.320	ENSG00000184575	XPOT	100	78.333	Homo_sapiens
ENSHCOG00000006415	xpot	100	82.225	ENSAPOG00000001362	xpot	99	82.225	Acanthochromis_polyacanthus
ENSHCOG00000006415	xpot	99	71.904	ENSAMEG00000018109	XPOT	99	71.904	Ailuropoda_melanoleuca
ENSHCOG00000006415	xpot	99	81.780	ENSACIG00000009016	xpot	100	81.780	Amphilophus_citrinellus
ENSHCOG00000006415	xpot	100	82.017	ENSAOCG00000005711	xpot	99	82.017	Amphiprion_ocellaris
ENSHCOG00000006415	xpot	100	82.017	ENSAPEG00000024660	XPOT	99	83.482	Amphiprion_percula
ENSHCOG00000006415	xpot	97	78.279	ENSAPEG00000024714	xpot	98	82.734	Amphiprion_percula
ENSHCOG00000006415	xpot	100	82.225	ENSATEG00000000675	xpot	99	82.225	Anabas_testudineus
ENSHCOG00000006415	xpot	99	71.904	ENSAPLG00000008073	XPOT	99	71.904	Anas_platyrhynchos
ENSHCOG00000006415	xpot	99	70.864	ENSACAG00000003154	XPOT	99	70.864	Anolis_carolinensis
ENSHCOG00000006415	xpot	99	61.514	ENSANAG00000032778	-	95	66.108	Aotus_nancymaae
ENSHCOG00000006415	xpot	97	61.475	ENSANAG00000029914	-	99	57.440	Aotus_nancymaae
ENSHCOG00000006415	xpot	100	81.081	ENSACLG00000008404	xpot	99	81.081	Astatotilapia_calliptera
ENSHCOG00000006415	xpot	100	78.378	ENSAMXG00000013542	xpot	99	78.378	Astyanax_mexicanus
ENSHCOG00000006415	xpot	99	72.112	ENSBTAG00000026962	XPOT	99	72.112	Bos_taurus
ENSHCOG00000006415	xpot	99	72.112	ENSCJAG00000014762	XPOT	95	72.112	Callithrix_jacchus
ENSHCOG00000006415	xpot	99	72.425	ENSCAFG00000000352	XPOT	99	72.425	Canis_familiaris
ENSHCOG00000006415	xpot	99	72.425	ENSCAFG00020019527	XPOT	100	72.205	Canis_lupus_dingo
ENSHCOG00000006415	xpot	99	72.216	ENSCHIG00000018310	XPOT	99	72.216	Capra_hircus
ENSHCOG00000006415	xpot	99	72.633	ENSTSYG00000008852	XPOT	99	72.633	Carlito_syrichta
ENSHCOG00000006415	xpot	93	66.126	ENSCAPG00000001620	XPOT	99	65.802	Cavia_aperea
ENSHCOG00000006415	xpot	99	72.008	ENSCPOG00000027042	XPOT	99	72.008	Cavia_porcellus
ENSHCOG00000006415	xpot	97	69.057	ENSCCAG00000035803	XPOT	97	73.105	Cebus_capucinus
ENSHCOG00000006415	xpot	99	72.320	ENSCATG00000037826	XPOT	99	72.320	Cercocebus_atys
ENSHCOG00000006415	xpot	99	54.271	ENSCATG00000039901	-	99	54.271	Cercocebus_atys
ENSHCOG00000006415	xpot	99	72.008	ENSCLAG00000011382	XPOT	99	72.008	Chinchilla_lanigera
ENSHCOG00000006415	xpot	99	72.320	ENSCSAG00000004475	XPOT	99	72.320	Chlorocebus_sabaeus
ENSHCOG00000006415	xpot	79	69.136	ENSCHOG00000000288	-	67	74.444	Choloepus_hoffmanni
ENSHCOG00000006415	xpot	99	71.176	ENSCPBG00000001003	XPOT	99	71.176	Chrysemys_picta_bellii
ENSHCOG00000006415	xpot	99	42.583	ENSCSAVG00000001681	-	99	42.583	Ciona_savignyi
ENSHCOG00000006415	xpot	97	52.553	ENSCANG00000030844	-	99	53.298	Colobus_angolensis_palliatus
ENSHCOG00000006415	xpot	99	72.216	ENSCANG00000033371	XPOT	99	72.216	Colobus_angolensis_palliatus
ENSHCOG00000006415	xpot	99	71.280	ENSCGRG00001016835	Xpot	99	71.280	Cricetulus_griseus_chok1gshd
ENSHCOG00000006415	xpot	99	70.894	ENSCGRG00000000577	Xpot	99	70.894	Cricetulus_griseus_crigri
ENSHCOG00000006415	xpot	100	80.977	ENSCSEG00000003973	xpot	99	80.977	Cynoglossus_semilaevis
ENSHCOG00000006415	xpot	100	81.393	ENSCVAG00000020453	xpot	99	81.393	Cyprinodon_variegatus
ENSHCOG00000006415	xpot	100	78.170	ENSDARG00000099652	xpot	99	78.170	Danio_rerio
ENSHCOG00000006415	xpot	99	72.008	ENSDORG00000000259	Xpot	99	72.008	Dipodomys_ordii
ENSHCOG00000006415	xpot	61	71.698	ENSETEG00000002981	-	55	73.478	Echinops_telfairi
ENSHCOG00000006415	xpot	91	55.631	ENSEBUG00000007650	xpot	99	56.112	Eptatretus_burgeri
ENSHCOG00000006415	xpot	99	72.008	ENSEASG00005007701	XPOT	97	72.008	Equus_asinus_asinus
ENSHCOG00000006415	xpot	99	72.008	ENSECAG00000018336	XPOT	92	72.907	Equus_caballus
ENSHCOG00000006415	xpot	86	73.841	ENSEEUG00000009700	XPOT	86	73.841	Erinaceus_europaeus
ENSHCOG00000006415	xpot	88	69.476	ENSELUG00000009337	xpot	96	81.319	Esox_lucius
ENSHCOG00000006415	xpot	99	72.216	ENSFCAG00000012360	XPOT	99	72.216	Felis_catus
ENSHCOG00000006415	xpot	99	71.904	ENSFALG00000009938	XPOT	99	71.904	Ficedula_albicollis
ENSHCOG00000006415	xpot	99	72.158	ENSFDAG00000012640	XPOT	99	72.158	Fukomys_damarensis
ENSHCOG00000006415	xpot	83	80.213	ENSFHEG00000009648	xpot	99	80.213	Fundulus_heteroclitus
ENSHCOG00000006415	xpot	92	73.684	ENSGMOG00000018888	xpot	93	73.684	Gadus_morhua
ENSHCOG00000006415	xpot	99	72.112	ENSGALG00000009835	XPOT	99	72.112	Gallus_gallus
ENSHCOG00000006415	xpot	100	80.873	ENSGAFG00000004150	xpot	99	80.873	Gambusia_affinis
ENSHCOG00000006415	xpot	100	78.041	ENSGACG00000000589	xpot	100	78.041	Gasterosteus_aculeatus
ENSHCOG00000006415	xpot	99	71.176	ENSGAGG00000022917	XPOT	99	71.176	Gopherus_agassizii
ENSHCOG00000006415	xpot	99	72.320	ENSGGOG00000006089	XPOT	99	72.320	Gorilla_gorilla
ENSHCOG00000006415	xpot	93	64.316	ENSGGOG00000027170	-	95	64.810	Gorilla_gorilla
ENSHCOG00000006415	xpot	100	81.185	ENSHBUG00000020681	xpot	99	81.185	Haplochromis_burtoni
ENSHCOG00000006415	xpot	99	71.937	ENSHGLG00000005833	XPOT	99	71.937	Heterocephalus_glaber_female
ENSHCOG00000006415	xpot	99	72.008	ENSHGLG00100000810	XPOT	99	72.008	Heterocephalus_glaber_male
ENSHCOG00000006415	xpot	100	77.339	ENSIPUG00000015271	xpot	99	77.339	Ictalurus_punctatus
ENSHCOG00000006415	xpot	99	72.008	ENSSTOG00000021805	XPOT	99	72.008	Ictidomys_tridecemlineatus
ENSHCOG00000006415	xpot	99	69.634	ENSJJAG00000019671	-	99	69.634	Jaculus_jaculus
ENSHCOG00000006415	xpot	99	60.897	ENSJJAG00000014767	-	99	61.105	Jaculus_jaculus
ENSHCOG00000006415	xpot	94	82.709	ENSKMAG00000019126	xpot	99	82.709	Kryptolebias_marmoratus
ENSHCOG00000006415	xpot	100	80.977	ENSLBEG00000000178	xpot	99	80.977	Labrus_bergylta
ENSHCOG00000006415	xpot	99	70.613	ENSLACG00000014355	XPOT	99	70.613	Latimeria_chalumnae
ENSHCOG00000006415	xpot	100	74.819	ENSLOCG00000016512	xpot	99	74.819	Lepisosteus_oculatus
ENSHCOG00000006415	xpot	99	71.933	ENSLAFG00000009829	XPOT	99	71.933	Loxodonta_africana
ENSHCOG00000006415	xpot	99	56.667	ENSMFAG00000038180	-	99	56.667	Macaca_fascicularis
ENSHCOG00000006415	xpot	99	72.320	ENSMFAG00000032644	XPOT	99	72.320	Macaca_fascicularis
ENSHCOG00000006415	xpot	97	58.044	ENSMMUG00000021196	-	99	58.849	Macaca_mulatta
ENSHCOG00000006415	xpot	99	72.320	ENSMMUG00000007659	XPOT	99	72.320	Macaca_mulatta
ENSHCOG00000006415	xpot	99	72.425	ENSMNEG00000033875	XPOT	99	72.425	Macaca_nemestrina
ENSHCOG00000006415	xpot	99	52.396	ENSMNEG00000029730	-	99	52.396	Macaca_nemestrina
ENSHCOG00000006415	xpot	99	69.719	ENSMLEG00000043977	XPOT	99	69.719	Mandrillus_leucophaeus
ENSHCOG00000006415	xpot	100	81.289	ENSMAMG00000020690	xpot	99	81.289	Mastacembelus_armatus
ENSHCOG00000006415	xpot	100	80.873	ENSMZEG00005018955	xpot	99	80.873	Maylandia_zebra
ENSHCOG00000006415	xpot	99	72.141	ENSMGAG00000010208	XPOT	99	72.141	Meleagris_gallopavo
ENSHCOG00000006415	xpot	99	70.251	ENSMAUG00000016836	Xpot	99	70.251	Mesocricetus_auratus
ENSHCOG00000006415	xpot	99	72.320	ENSMICG00000012001	XPOT	99	72.320	Microcebus_murinus
ENSHCOG00000006415	xpot	99	71.622	ENSMOCG00000014097	Xpot	99	71.622	Microtus_ochrogaster
ENSHCOG00000006415	xpot	99	80.942	ENSMMOG00000005960	xpot	97	80.942	Mola_mola
ENSHCOG00000006415	xpot	100	80.873	ENSMALG00000007523	xpot	99	80.873	Monopterus_albus
ENSHCOG00000006415	xpot	99	71.384	MGP_CAROLIEiJ_G0015858	Xpot	99	71.384	Mus_caroli
ENSHCOG00000006415	xpot	99	71.176	ENSMUSG00000034667	Xpot	99	71.176	Mus_musculus
ENSHCOG00000006415	xpot	99	70.998	MGP_PahariEiJ_G0031228	Xpot	99	70.998	Mus_pahari
ENSHCOG00000006415	xpot	99	69.231	MGP_SPRETEiJ_G0016683	Xpot	99	69.231	Mus_spretus
ENSHCOG00000006415	xpot	99	72.425	ENSMPUG00000017529	XPOT	99	72.425	Mustela_putorius_furo
ENSHCOG00000006415	xpot	99	72.320	ENSMLUG00000009664	XPOT	99	72.320	Myotis_lucifugus
ENSHCOG00000006415	xpot	99	72.222	ENSNGAG00000020615	Xpot	99	72.222	Nannospalax_galili
ENSHCOG00000006415	xpot	100	81.185	ENSNBRG00000017136	xpot	99	81.185	Neolamprologus_brichardi
ENSHCOG00000006415	xpot	99	72.320	ENSNLEG00000017052	XPOT	99	72.320	Nomascus_leucogenys
ENSHCOG00000006415	xpot	70	61.314	ENSMEUG00000016032	-	76	61.468	Notamacropus_eugenii
ENSHCOG00000006415	xpot	97	68.930	ENSOPRG00000013079	XPOT	72	80.000	Ochotona_princeps
ENSHCOG00000006415	xpot	99	71.937	ENSODEG00000004607	XPOT	99	71.937	Octodon_degus
ENSHCOG00000006415	xpot	100	81.289	ENSONIG00000007471	xpot	99	81.289	Oreochromis_niloticus
ENSHCOG00000006415	xpot	99	72.425	ENSOANG00000010932	XPOT	99	72.425	Ornithorhynchus_anatinus
ENSHCOG00000006415	xpot	99	72.216	ENSOCUG00000012126	XPOT	96	72.216	Oryctolagus_cuniculus
ENSHCOG00000006415	xpot	100	80.353	ENSORLG00000020105	xpot	99	80.353	Oryzias_latipes
ENSHCOG00000006415	xpot	100	80.353	ENSORLG00020003770	xpot	99	80.353	Oryzias_latipes_hni
ENSHCOG00000006415	xpot	99	78.661	ENSORLG00015003002	xpot	99	78.661	Oryzias_latipes_hsok
ENSHCOG00000006415	xpot	99	78.056	ENSOMEG00000021300	xpot	99	78.056	Oryzias_melastigma
ENSHCOG00000006415	xpot	99	65.453	ENSOGAG00000004952	XPOT	99	65.453	Otolemur_garnettii
ENSHCOG00000006415	xpot	99	72.216	ENSOARG00000003504	XPOT	99	72.216	Ovis_aries
ENSHCOG00000006415	xpot	93	61.670	ENSPPAG00000041601	-	94	61.519	Pan_paniscus
ENSHCOG00000006415	xpot	99	53.534	ENSPPAG00000040981	-	99	53.430	Pan_paniscus
ENSHCOG00000006415	xpot	99	72.320	ENSPPAG00000031361	XPOT	99	72.320	Pan_paniscus
ENSHCOG00000006415	xpot	99	72.320	ENSPPRG00000005552	XPOT	99	72.320	Panthera_pardus
ENSHCOG00000006415	xpot	99	72.320	ENSPTIG00000022072	XPOT	96	72.320	Panthera_tigris_altaica
ENSHCOG00000006415	xpot	99	72.320	ENSPTRG00000005173	XPOT	99	72.320	Pan_troglodytes
ENSHCOG00000006415	xpot	99	52.703	ENSPTRG00000049416	-	99	52.599	Pan_troglodytes
ENSHCOG00000006415	xpot	99	52.807	ENSPTRG00000046749	-	99	52.703	Pan_troglodytes
ENSHCOG00000006415	xpot	93	60.560	ENSPTRG00000045368	-	84	63.522	Pan_troglodytes
ENSHCOG00000006415	xpot	99	72.320	ENSPANG00000001024	-	99	72.320	Papio_anubis
ENSHCOG00000006415	xpot	99	70.135	ENSPANG00000030915	-	99	70.135	Papio_anubis
ENSHCOG00000006415	xpot	100	77.235	ENSPKIG00000001935	xpot	100	77.235	Paramormyrops_kingsleyae
ENSHCOG00000006415	xpot	99	71.488	ENSPSIG00000007346	XPOT	99	71.488	Pelodiscus_sinensis
ENSHCOG00000006415	xpot	97	76.844	ENSPMGG00000016668	xpot	91	81.329	Periophthalmus_magnuspinnatus
ENSHCOG00000006415	xpot	99	71.384	ENSPEMG00000002538	Xpot	99	71.384	Peromyscus_maniculatus_bairdii
ENSHCOG00000006415	xpot	75	63.807	ENSPMAG00000000201	xpot	98	63.706	Petromyzon_marinus
ENSHCOG00000006415	xpot	99	72.320	ENSPCIG00000029686	XPOT	99	72.320	Phascolarctos_cinereus
ENSHCOG00000006415	xpot	100	81.393	ENSPFOG00000002834	xpot	99	81.393	Poecilia_formosa
ENSHCOG00000006415	xpot	100	81.393	ENSPLAG00000017684	xpot	99	81.393	Poecilia_latipinna
ENSHCOG00000006415	xpot	100	81.393	ENSPMEG00000006259	xpot	99	81.393	Poecilia_mexicana
ENSHCOG00000006415	xpot	99	79.292	ENSPREG00000018505	xpot	99	79.292	Poecilia_reticulata
ENSHCOG00000006415	xpot	99	72.320	ENSPPYG00000004727	XPOT	99	72.320	Pongo_abelii
ENSHCOG00000006415	xpot	88	68.098	ENSPCAG00000001574	XPOT	88	68.098	Procavia_capensis
ENSHCOG00000006415	xpot	99	71.606	ENSPCOG00000028383	XPOT	99	71.606	Propithecus_coquereli
ENSHCOG00000006415	xpot	99	72.112	ENSPVAG00000008199	XPOT	99	72.112	Pteropus_vampyrus
ENSHCOG00000006415	xpot	100	81.185	ENSPNYG00000022747	xpot	99	81.185	Pundamilia_nyererei
ENSHCOG00000006415	xpot	100	78.274	ENSPNAG00000009140	xpot	99	78.274	Pygocentrus_nattereri
ENSHCOG00000006415	xpot	97	67.606	ENSRNOG00000007088	Xpot	92	68.750	Rattus_norvegicus
ENSHCOG00000006415	xpot	99	58.817	ENSRBIG00000032079	-	99	58.817	Rhinopithecus_bieti
ENSHCOG00000006415	xpot	99	72.320	ENSRBIG00000041353	XPOT	99	72.320	Rhinopithecus_bieti
ENSHCOG00000006415	xpot	99	72.320	ENSRROG00000038276	XPOT	99	72.320	Rhinopithecus_roxellana
ENSHCOG00000006415	xpot	99	72.112	ENSSBOG00000024782	XPOT	99	72.112	Saimiri_boliviensis_boliviensis
ENSHCOG00000006415	xpot	99	72.216	ENSSHAG00000007043	XPOT	99	72.216	Sarcophilus_harrisii
ENSHCOG00000006415	xpot	100	75.597	ENSSFOG00015000827	xpot	100	75.597	Scleropages_formosus
ENSHCOG00000006415	xpot	100	81.081	ENSSMAG00000005164	xpot	99	81.081	Scophthalmus_maximus
ENSHCOG00000006415	xpot	100	82.225	ENSSDUG00000012514	xpot	99	82.225	Seriola_dumerili
ENSHCOG00000006415	xpot	100	82.121	ENSSLDG00000019497	xpot	99	82.121	Seriola_lalandi_dorsalis
ENSHCOG00000006415	xpot	83	65.608	ENSSARG00000005789	XPOT	88	65.608	Sorex_araneus
ENSHCOG00000006415	xpot	99	70.777	ENSSPUG00000009837	XPOT	99	70.777	Sphenodon_punctatus
ENSHCOG00000006415	xpot	99	72.216	ENSSSCG00000000466	XPOT	99	72.216	Sus_scrofa
ENSHCOG00000006415	xpot	99	71.800	ENSTGUG00000006459	XPOT	99	71.800	Taeniopygia_guttata
ENSHCOG00000006415	xpot	100	79.029	ENSTNIG00000002483	xpot	100	79.029	Tetraodon_nigroviridis
ENSHCOG00000006415	xpot	90	77.273	ENSTBEG00000009738	XPOT	90	77.273	Tupaia_belangeri
ENSHCOG00000006415	xpot	99	72.216	ENSTTRG00000016808	XPOT	99	72.216	Tursiops_truncatus
ENSHCOG00000006415	xpot	99	72.320	ENSUAMG00000017168	XPOT	99	72.320	Ursus_americanus
ENSHCOG00000006415	xpot	99	72.320	ENSUMAG00000020382	XPOT	99	72.320	Ursus_maritimus
ENSHCOG00000006415	xpot	99	71.803	ENSVPAG00000004244	XPOT	100	71.803	Vicugna_pacos
ENSHCOG00000006415	xpot	99	72.425	ENSVVUG00000015001	XPOT	100	72.205	Vulpes_vulpes
ENSHCOG00000006415	xpot	99	69.606	ENSXETG00000021668	xpot	99	69.606	Xenopus_tropicalis
ENSHCOG00000006415	xpot	99	78.542	ENSXCOG00000011945	xpot	99	78.542	Xiphophorus_couchianus
ENSHCOG00000006415	xpot	100	81.289	ENSXMAG00000002827	xpot	99	81.289	Xiphophorus_maculatus