EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006420 (Gene tree)
Gene ID: 109531795
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6479 bases
Position: chrKV880447.1:652904-659382
Accession: 109531795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020371	HAT	PF02184.16	4.9e-32	1	2
ENSHCOP00000020371	HAT	PF02184.16	4.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006348	-	2061	XM_019896288	ENSHCOP00000020371	686 (aa)	XP_019751847	-

Gene Model

Click here to download ENSHCOG00000006420's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006420	crnkl1	98	82.845	ENSG00000101343	CRNKL1	97	84.258	Homo_sapiens
ENSHCOG00000006420	crnkl1	99	90.159	ENSAPOG00000009705	crnkl1	99	90.159	Acanthochromis_polyacanthus
ENSHCOG00000006420	crnkl1	97	83.161	ENSAMEG00000000270	CRNKL1	81	84.708	Ailuropoda_melanoleuca
ENSHCOG00000006420	crnkl1	99	87.320	ENSACIG00000015267	crnkl1	92	87.320	Amphilophus_citrinellus
ENSHCOG00000006420	crnkl1	99	89.826	ENSAOCG00000021964	crnkl1	89	91.779	Amphiprion_ocellaris
ENSHCOG00000006420	crnkl1	97	90.950	ENSAPEG00000015041	crnkl1	89	91.629	Amphiprion_percula
ENSHCOG00000006420	crnkl1	99	89.405	ENSATEG00000001068	crnkl1	88	91.766	Anabas_testudineus
ENSHCOG00000006420	crnkl1	99	82.507	ENSAPLG00000013105	CRNKL1	99	82.507	Anas_platyrhynchos
ENSHCOG00000006420	crnkl1	99	84.111	ENSACAG00000005284	CRNKL1	98	85.629	Anolis_carolinensis
ENSHCOG00000006420	crnkl1	91	83.651	ENSANAG00000024889	CRNKL1	99	83.651	Aotus_nancymaae
ENSHCOG00000006420	crnkl1	99	88.099	ENSACLG00000010813	crnkl1	88	90.105	Astatotilapia_calliptera
ENSHCOG00000006420	crnkl1	96	88.872	ENSAMXG00000018334	crnkl1	90	88.922	Astyanax_mexicanus
ENSHCOG00000006420	crnkl1	99	83.043	ENSBTAG00000008472	CRNKL1	99	83.188	Bos_taurus
ENSHCOG00000006420	crnkl1	92	62.675	WBGene00019762	M03F8.3	89	62.651	Caenorhabditis_elegans
ENSHCOG00000006420	crnkl1	98	82.991	ENSCJAG00000005393	CRNKL1	97	84.408	Callithrix_jacchus
ENSHCOG00000006420	crnkl1	97	83.161	ENSCAFG00000005333	CRNKL1	92	84.708	Canis_familiaris
ENSHCOG00000006420	crnkl1	98	83.284	ENSCAFG00020027488	CRNKL1	97	84.708	Canis_lupus_dingo
ENSHCOG00000006420	crnkl1	99	83.333	ENSCHIG00000013171	CRNKL1	99	83.478	Capra_hircus
ENSHCOG00000006420	crnkl1	98	83.063	ENSTSYG00000004197	CRNKL1	97	84.108	Carlito_syrichta
ENSHCOG00000006420	crnkl1	92	80.484	ENSCAPG00000010501	CRNKL1	97	82.363	Cavia_aperea
ENSHCOG00000006420	crnkl1	98	82.551	ENSCPOG00000004418	CRNKL1	97	83.958	Cavia_porcellus
ENSHCOG00000006420	crnkl1	98	82.845	ENSCCAG00000027037	CRNKL1	97	84.258	Cebus_capucinus
ENSHCOG00000006420	crnkl1	98	82.698	ENSCATG00000034247	CRNKL1	97	84.108	Cercocebus_atys
ENSHCOG00000006420	crnkl1	98	82.845	ENSCLAG00000013859	CRNKL1	97	84.258	Chinchilla_lanigera
ENSHCOG00000006420	crnkl1	98	82.698	ENSCSAG00000011434	CRNKL1	97	84.108	Chlorocebus_sabaeus
ENSHCOG00000006420	crnkl1	97	82.422	ENSCHOG00000006371	CRNKL1	81	83.958	Choloepus_hoffmanni
ENSHCOG00000006420	crnkl1	98	84.773	ENSCPBG00000023501	CRNKL1	97	86.228	Chrysemys_picta_bellii
ENSHCOG00000006420	crnkl1	95	67.771	ENSCING00000002709	-	97	67.771	Ciona_intestinalis
ENSHCOG00000006420	crnkl1	98	82.698	ENSCANG00000038789	CRNKL1	97	84.108	Colobus_angolensis_palliatus
ENSHCOG00000006420	crnkl1	99	82.824	ENSCGRG00001001115	-	97	84.708	Cricetulus_griseus_chok1gshd
ENSHCOG00000006420	crnkl1	99	82.824	ENSCGRG00001000687	-	97	84.708	Cricetulus_griseus_chok1gshd
ENSHCOG00000006420	crnkl1	99	82.824	ENSCGRG00000007854	Crnkl1	97	84.708	Cricetulus_griseus_crigri
ENSHCOG00000006420	crnkl1	97	89.956	ENSCSEG00000005594	crnkl1	85	90.855	Cynoglossus_semilaevis
ENSHCOG00000006420	crnkl1	96	89.955	ENSCVAG00000015172	crnkl1	90	89.955	Cyprinodon_variegatus
ENSHCOG00000006420	crnkl1	95	87.934	ENSDARG00000007901	crnkl1	89	88.024	Danio_rerio
ENSHCOG00000006420	crnkl1	98	83.016	ENSDNOG00000016226	CRNKL1	93	84.408	Dasypus_novemcinctus
ENSHCOG00000006420	crnkl1	96	77.096	ENSDORG00000030174	-	99	77.096	Dipodomys_ordii
ENSHCOG00000006420	crnkl1	96	77.928	ENSDORG00000023724	-	98	77.928	Dipodomys_ordii
ENSHCOG00000006420	crnkl1	98	81.395	ENSDORG00000000394	-	97	82.764	Dipodomys_ordii
ENSHCOG00000006420	crnkl1	96	67.708	FBgn0000377	crn	95	67.713	Drosophila_melanogaster
ENSHCOG00000006420	crnkl1	98	73.167	ENSETEG00000003711	CRNKL1	81	74.363	Echinops_telfairi
ENSHCOG00000006420	crnkl1	98	57.840	ENSEBUG00000013461	crnkl1	94	59.909	Eptatretus_burgeri
ENSHCOG00000006420	crnkl1	98	83.187	ENSEASG00005002072	CRNKL1	97	84.708	Equus_asinus_asinus
ENSHCOG00000006420	crnkl1	98	83.187	ENSECAG00000022215	CRNKL1	97	84.708	Equus_caballus
ENSHCOG00000006420	crnkl1	97	80.502	ENSEEUG00000000413	CRNKL1	90	82.009	Erinaceus_europaeus
ENSHCOG00000006420	crnkl1	96	87.874	ENSELUG00000015424	crnkl1	95	87.874	Esox_lucius
ENSHCOG00000006420	crnkl1	98	83.284	ENSFCAG00000000714	CRNKL1	97	84.708	Felis_catus
ENSHCOG00000006420	crnkl1	96	83.408	ENSFALG00000004611	CRNKL1	98	84.604	Ficedula_albicollis
ENSHCOG00000006420	crnkl1	98	82.870	ENSFDAG00000000604	CRNKL1	97	84.258	Fukomys_damarensis
ENSHCOG00000006420	crnkl1	97	89.676	ENSFHEG00000013163	crnkl1	87	90.555	Fundulus_heteroclitus
ENSHCOG00000006420	crnkl1	96	88.358	ENSGMOG00000007609	crnkl1	93	88.358	Gadus_morhua
ENSHCOG00000006420	crnkl1	98	83.748	ENSGALG00000008429	CRNKL1	97	85.180	Gallus_gallus
ENSHCOG00000006420	crnkl1	97	89.450	ENSGAFG00000014249	crnkl1	88	89.805	Gambusia_affinis
ENSHCOG00000006420	crnkl1	97	89.333	ENSGACG00000011852	crnkl1	89	89.820	Gasterosteus_aculeatus
ENSHCOG00000006420	crnkl1	94	84.380	ENSGAGG00000021233	CRNKL1	97	85.893	Gopherus_agassizii
ENSHCOG00000006420	crnkl1	98	82.845	ENSGGOG00000014176	CRNKL1	97	84.258	Gorilla_gorilla
ENSHCOG00000006420	crnkl1	99	88.244	ENSHBUG00000005246	crnkl1	88	90.255	Haplochromis_burtoni
ENSHCOG00000006420	crnkl1	98	82.698	ENSHGLG00000010856	CRNKL1	97	84.108	Heterocephalus_glaber_female
ENSHCOG00000006420	crnkl1	98	82.698	ENSHGLG00100011521	CRNKL1	97	84.108	Heterocephalus_glaber_male
ENSHCOG00000006420	crnkl1	93	88.752	ENSIPUG00000006751	crnkl1	90	88.804	Ictalurus_punctatus
ENSHCOG00000006420	crnkl1	91	70.079	ENSIPUG00000000315	-	99	70.079	Ictalurus_punctatus
ENSHCOG00000006420	crnkl1	95	74.661	ENSIPUG00000006836	-	98	74.775	Ictalurus_punctatus
ENSHCOG00000006420	crnkl1	98	82.845	ENSSTOG00000014747	CRNKL1	97	84.258	Ictidomys_tridecemlineatus
ENSHCOG00000006420	crnkl1	98	81.662	ENSJJAG00000016926	Crnkl1	97	83.016	Jaculus_jaculus
ENSHCOG00000006420	crnkl1	99	87.536	ENSKMAG00000003620	crnkl1	85	89.955	Kryptolebias_marmoratus
ENSHCOG00000006420	crnkl1	77	70.201	ENSLBEG00000003543	crnkl1	89	73.887	Labrus_bergylta
ENSHCOG00000006420	crnkl1	96	86.377	ENSLACG00000001129	CRNKL1	98	86.377	Latimeria_chalumnae
ENSHCOG00000006420	crnkl1	96	88.739	ENSLOCG00000016889	crnkl1	93	88.772	Lepisosteus_oculatus
ENSHCOG00000006420	crnkl1	98	82.430	ENSLAFG00000004512	CRNKL1	97	84.581	Loxodonta_africana
ENSHCOG00000006420	crnkl1	98	82.698	ENSMFAG00000039893	CRNKL1	97	84.108	Macaca_fascicularis
ENSHCOG00000006420	crnkl1	98	82.698	ENSMMUG00000007709	CRNKL1	97	84.108	Macaca_mulatta
ENSHCOG00000006420	crnkl1	98	82.698	ENSMNEG00000037490	CRNKL1	97	84.108	Macaca_nemestrina
ENSHCOG00000006420	crnkl1	98	82.698	ENSMLEG00000034885	CRNKL1	97	84.108	Mandrillus_leucophaeus
ENSHCOG00000006420	crnkl1	99	87.663	ENSMAMG00000008757	crnkl1	88	90.105	Mastacembelus_armatus
ENSHCOG00000006420	crnkl1	99	88.099	ENSMZEG00005022345	crnkl1	89	90.105	Maylandia_zebra
ENSHCOG00000006420	crnkl1	98	83.626	ENSMGAG00000003452	CRNKL1	92	84.799	Meleagris_gallopavo
ENSHCOG00000006420	crnkl1	99	82.824	ENSMAUG00000020764	Crnkl1	97	84.708	Mesocricetus_auratus
ENSHCOG00000006420	crnkl1	98	82.991	ENSMICG00000006048	CRNKL1	97	84.258	Microcebus_murinus
ENSHCOG00000006420	crnkl1	95	60.241	ENSMOCG00000004179	-	95	60.389	Microtus_ochrogaster
ENSHCOG00000006420	crnkl1	99	74.964	ENSMOCG00000000681	-	97	76.583	Microtus_ochrogaster
ENSHCOG00000006420	crnkl1	91	89.557	ENSMMOG00000017601	crnkl1	97	89.557	Mola_mola
ENSHCOG00000006420	crnkl1	97	77.926	ENSMODG00000010857	-	97	78.561	Monodelphis_domestica
ENSHCOG00000006420	crnkl1	98	81.187	ENSMODG00000005961	-	96	82.396	Monodelphis_domestica
ENSHCOG00000006420	crnkl1	99	65.396	ENSMALG00000011211	crnkl1	89	74.118	Monopterus_albus
ENSHCOG00000006420	crnkl1	99	82.387	MGP_CAROLIEiJ_G0024394	Crnkl1	97	84.408	Mus_caroli
ENSHCOG00000006420	crnkl1	99	82.533	ENSMUSG00000001767	Crnkl1	97	84.408	Mus_musculus
ENSHCOG00000006420	crnkl1	99	81.659	MGP_PahariEiJ_G0025838	Crnkl1	97	83.508	Mus_pahari
ENSHCOG00000006420	crnkl1	99	82.533	MGP_SPRETEiJ_G0025312	Crnkl1	97	84.408	Mus_spretus
ENSHCOG00000006420	crnkl1	98	83.284	ENSMPUG00000001226	CRNKL1	97	84.708	Mustela_putorius_furo
ENSHCOG00000006420	crnkl1	97	83.038	ENSMLUG00000016513	CRNKL1	87	84.581	Myotis_lucifugus
ENSHCOG00000006420	crnkl1	98	80.863	ENSNGAG00000023097	Crnkl1	97	82.206	Nannospalax_galili
ENSHCOG00000006420	crnkl1	99	88.244	ENSNBRG00000007867	crnkl1	88	90.255	Neolamprologus_brichardi
ENSHCOG00000006420	crnkl1	98	80.792	ENSNLEG00000009862	CRNKL1	97	82.159	Nomascus_leucogenys
ENSHCOG00000006420	crnkl1	98	79.356	ENSMEUG00000002361	-	97	80.689	Notamacropus_eugenii
ENSHCOG00000006420	crnkl1	96	83.508	ENSMEUG00000012167	-	97	84.816	Notamacropus_eugenii
ENSHCOG00000006420	crnkl1	85	56.699	ENSOPRG00000009242	-	61	56.699	Ochotona_princeps
ENSHCOG00000006420	crnkl1	98	82.698	ENSODEG00000012175	CRNKL1	97	84.108	Octodon_degus
ENSHCOG00000006420	crnkl1	97	89.614	ENSONIG00000018728	crnkl1	88	90.255	Oreochromis_niloticus
ENSHCOG00000006420	crnkl1	98	81.818	ENSOCUG00000015484	CRNKL1	81	84.155	Oryctolagus_cuniculus
ENSHCOG00000006420	crnkl1	97	88.839	ENSORLG00000017240	crnkl1	94	86.795	Oryzias_latipes
ENSHCOG00000006420	crnkl1	97	88.988	ENSORLG00020001742	crnkl1	89	89.505	Oryzias_latipes_hni
ENSHCOG00000006420	crnkl1	97	88.988	ENSORLG00015019564	crnkl1	89	89.505	Oryzias_latipes_hsok
ENSHCOG00000006420	crnkl1	98	88.433	ENSOMEG00000019895	crnkl1	89	90.105	Oryzias_melastigma
ENSHCOG00000006420	crnkl1	98	83.138	ENSOGAG00000011544	CRNKL1	97	84.408	Otolemur_garnettii
ENSHCOG00000006420	crnkl1	98	83.066	ENSOARG00000002150	CRNKL1	90	83.333	Ovis_aries
ENSHCOG00000006420	crnkl1	97	82.866	ENSPPAG00000027847	CRNKL1	81	84.408	Pan_paniscus
ENSHCOG00000006420	crnkl1	98	83.284	ENSPPRG00000001955	CRNKL1	97	84.708	Panthera_pardus
ENSHCOG00000006420	crnkl1	98	83.284	ENSPTIG00000007393	CRNKL1	97	84.708	Panthera_tigris_altaica
ENSHCOG00000006420	crnkl1	98	82.845	ENSPTRG00000030609	CRNKL1	97	84.258	Pan_troglodytes
ENSHCOG00000006420	crnkl1	98	82.698	ENSPANG00000017420	CRNKL1	97	84.108	Papio_anubis
ENSHCOG00000006420	crnkl1	95	85.586	ENSPKIG00000017093	crnkl1	87	85.693	Paramormyrops_kingsleyae
ENSHCOG00000006420	crnkl1	98	82.941	ENSPSIG00000012705	CRNKL1	97	84.361	Pelodiscus_sinensis
ENSHCOG00000006420	crnkl1	98	81.618	ENSPMGG00000006263	crnkl1	95	82.687	Periophthalmus_magnuspinnatus
ENSHCOG00000006420	crnkl1	99	82.824	ENSPEMG00000000073	-	97	84.708	Peromyscus_maniculatus_bairdii
ENSHCOG00000006420	crnkl1	98	80.435	ENSPMAG00000002250	crnkl1	97	82.186	Petromyzon_marinus
ENSHCOG00000006420	crnkl1	98	83.163	ENSPCIG00000025825	CRNKL1	93	84.558	Phascolarctos_cinereus
ENSHCOG00000006420	crnkl1	97	89.419	ENSPFOG00000005102	crnkl1	90	89.805	Poecilia_formosa
ENSHCOG00000006420	crnkl1	97	89.450	ENSPLAG00000007288	crnkl1	87	89.805	Poecilia_latipinna
ENSHCOG00000006420	crnkl1	97	89.568	ENSPMEG00000008865	crnkl1	91	89.955	Poecilia_mexicana
ENSHCOG00000006420	crnkl1	100	90.747	ENSPREG00000012615	crnkl1	90	89.655	Poecilia_reticulata
ENSHCOG00000006420	crnkl1	97	82.570	ENSPPYG00000010747	CRNKL1	79	84.108	Pongo_abelii
ENSHCOG00000006420	crnkl1	97	78.338	ENSPCAG00000003296	CRNKL1	83	79.610	Procavia_capensis
ENSHCOG00000006420	crnkl1	97	82.127	ENSPCOG00000017608	CRNKL1	81	83.508	Propithecus_coquereli
ENSHCOG00000006420	crnkl1	97	83.013	ENSPVAG00000006207	CRNKL1	81	84.558	Pteropus_vampyrus
ENSHCOG00000006420	crnkl1	99	87.954	ENSPNYG00000001977	crnkl1	88	89.955	Pundamilia_nyererei
ENSHCOG00000006420	crnkl1	96	89.205	ENSPNAG00000001507	crnkl1	96	85.949	Pygocentrus_nattereri
ENSHCOG00000006420	crnkl1	99	82.533	ENSRNOG00000010587	Crnkl1	97	84.408	Rattus_norvegicus
ENSHCOG00000006420	crnkl1	99	82.387	ENSRNOG00000040045	Crnkl1	97	84.258	Rattus_norvegicus
ENSHCOG00000006420	crnkl1	98	82.698	ENSRBIG00000031770	CRNKL1	97	84.108	Rhinopithecus_bieti
ENSHCOG00000006420	crnkl1	98	82.845	ENSRROG00000040450	CRNKL1	97	84.258	Rhinopithecus_roxellana
ENSHCOG00000006420	crnkl1	93	36.720	YLR117C	CLF1	99	36.812	Saccharomyces_cerevisiae
ENSHCOG00000006420	crnkl1	98	82.991	ENSSBOG00000029672	CRNKL1	97	84.408	Saimiri_boliviensis_boliviensis
ENSHCOG00000006420	crnkl1	94	68.389	ENSSHAG00000011199	CRNKL1	99	68.389	Sarcophilus_harrisii
ENSHCOG00000006420	crnkl1	95	87.783	ENSSFOG00015000946	crnkl1	87	87.725	Scleropages_formosus
ENSHCOG00000006420	crnkl1	99	88.841	ENSSMAG00000007933	crnkl1	87	91.168	Scophthalmus_maximus
ENSHCOG00000006420	crnkl1	97	84.398	ENSSDUG00000012625	crnkl1	85	84.581	Seriola_dumerili
ENSHCOG00000006420	crnkl1	97	90.923	ENSSLDG00000021413	crnkl1	87	91.154	Seriola_lalandi_dorsalis
ENSHCOG00000006420	crnkl1	98	82.551	ENSSARG00000006443	CRNKL1	80	83.958	Sorex_araneus
ENSHCOG00000006420	crnkl1	99	83.673	ENSSPUG00000005254	CRNKL1	98	85.075	Sphenodon_punctatus
ENSHCOG00000006420	crnkl1	97	91.233	ENSSPAG00000016150	crnkl1	86	91.904	Stegastes_partitus
ENSHCOG00000006420	crnkl1	99	82.899	ENSSSCG00000038587	CRNKL1	99	82.899	Sus_scrofa
ENSHCOG00000006420	crnkl1	98	83.772	ENSTGUG00000007645	CRNKL1	96	84.948	Taeniopygia_guttata
ENSHCOG00000006420	crnkl1	97	84.799	ENSTRUG00000015417	crnkl1	88	85.157	Takifugu_rubripes
ENSHCOG00000006420	crnkl1	96	89.403	ENSTNIG00000010710	crnkl1	97	89.671	Tetraodon_nigroviridis
ENSHCOG00000006420	crnkl1	90	81.600	ENSTBEG00000001304	CRNKL1	82	81.746	Tupaia_belangeri
ENSHCOG00000006420	crnkl1	90	80.000	ENSTTRG00000000484	CRNKL1	81	80.159	Tursiops_truncatus
ENSHCOG00000006420	crnkl1	98	83.284	ENSUAMG00000018586	CRNKL1	97	84.708	Ursus_americanus
ENSHCOG00000006420	crnkl1	98	83.284	ENSUMAG00000024957	CRNKL1	97	84.708	Ursus_maritimus
ENSHCOG00000006420	crnkl1	97	83.161	ENSVVUG00000012559	CRNKL1	80	84.708	Vulpes_vulpes
ENSHCOG00000006420	crnkl1	99	84.134	ENSXETG00000009698	crnkl1	97	85.800	Xenopus_tropicalis
ENSHCOG00000006420	crnkl1	97	89.599	ENSXCOG00000000824	crnkl1	90	89.568	Xiphophorus_couchianus
ENSHCOG00000006420	crnkl1	97	89.286	ENSXMAG00000006896	crnkl1	90	89.254	Xiphophorus_maculatus