EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006425 (Gene tree)
Gene ID: 109514618
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4346 bases
Position: chrKV879699.1:177920-182265
Accession: 109514618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004884	RNA_pol_Rpb4	PF03874.16	2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006308	-	3170	XM_019867897	ENSHCOP00000004884	142 (aa)	XP_019723456	UPI00094E74C5

Gene Model

Click here to download ENSHCOG00000006425's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006425	polr2d	100	88.732	ENSG00000144231	POLR2D	100	93.269	Homo_sapiens
ENSHCOG00000006425	polr2d	99	94.366	ENSAPOG00000023553	polr2d	99	94.366	Acanthochromis_polyacanthus
ENSHCOG00000006425	polr2d	100	87.500	ENSAMEG00000011746	POLR2D	100	87.500	Ailuropoda_melanoleuca
ENSHCOG00000006425	polr2d	99	94.366	ENSAOCG00000007295	polr2d	99	94.366	Amphiprion_ocellaris
ENSHCOG00000006425	polr2d	99	94.366	ENSAPEG00000018714	polr2d	99	94.366	Amphiprion_percula
ENSHCOG00000006425	polr2d	100	92.361	ENSATEG00000020416	polr2d	100	92.361	Anabas_testudineus
ENSHCOG00000006425	polr2d	100	87.324	ENSACAG00000005255	POLR2D	100	87.324	Anolis_carolinensis
ENSHCOG00000006425	polr2d	100	88.732	ENSANAG00000019959	POLR2D	100	88.732	Aotus_nancymaae
ENSHCOG00000006425	polr2d	100	93.056	ENSACLG00000009919	polr2d	100	71.528	Astatotilapia_calliptera
ENSHCOG00000006425	polr2d	94	96.241	ENSAMXG00000008954	polr2d	97	93.525	Astyanax_mexicanus
ENSHCOG00000006425	polr2d	100	88.732	ENSBTAG00000053244	POLR2D	100	88.732	Bos_taurus
ENSHCOG00000006425	polr2d	97	57.857	WBGene00018391	rpb-4	97	57.857	Caenorhabditis_elegans
ENSHCOG00000006425	polr2d	100	88.028	ENSCJAG00000021814	-	100	88.028	Callithrix_jacchus
ENSHCOG00000006425	polr2d	100	88.732	ENSCJAG00000042216	-	100	88.732	Callithrix_jacchus
ENSHCOG00000006425	polr2d	100	88.732	ENSCAFG00000004311	POLR2D	100	88.732	Canis_familiaris
ENSHCOG00000006425	polr2d	100	88.732	ENSCAFG00020003617	POLR2D	100	88.732	Canis_lupus_dingo
ENSHCOG00000006425	polr2d	100	88.028	ENSCHIG00000025995	POLR2D	100	88.028	Capra_hircus
ENSHCOG00000006425	polr2d	82	90.598	ENSTSYG00000036021	POLR2D	100	90.598	Carlito_syrichta
ENSHCOG00000006425	polr2d	100	87.324	ENSCPOG00000002571	POLR2D	100	87.324	Cavia_porcellus
ENSHCOG00000006425	polr2d	100	88.732	ENSCCAG00000037709	POLR2D	100	88.732	Cebus_capucinus
ENSHCOG00000006425	polr2d	100	88.028	ENSCATG00000036749	POLR2D	100	88.028	Cercocebus_atys
ENSHCOG00000006425	polr2d	100	88.028	ENSCLAG00000004449	POLR2D	100	88.028	Chinchilla_lanigera
ENSHCOG00000006425	polr2d	100	88.028	ENSCSAG00000016861	POLR2D	100	88.028	Chlorocebus_sabaeus
ENSHCOG00000006425	polr2d	82	91.453	ENSCHOG00000013850	POLR2D	100	91.453	Choloepus_hoffmanni
ENSHCOG00000006425	polr2d	100	88.732	ENSCPBG00000019132	POLR2D	51	88.732	Chrysemys_picta_bellii
ENSHCOG00000006425	polr2d	90	85.156	ENSCING00000011474	-	96	85.156	Ciona_intestinalis
ENSHCOG00000006425	polr2d	93	83.333	ENSCSAVG00000008353	-	91	83.333	Ciona_savignyi
ENSHCOG00000006425	polr2d	100	88.732	ENSCANG00000043665	POLR2D	100	88.732	Colobus_angolensis_palliatus
ENSHCOG00000006425	polr2d	100	88.732	ENSCGRG00001013608	Polr2d	100	88.732	Cricetulus_griseus_chok1gshd
ENSHCOG00000006425	polr2d	82	91.453	ENSCGRG00000012624	Polr2d	100	91.453	Cricetulus_griseus_crigri
ENSHCOG00000006425	polr2d	100	92.361	ENSCSEG00000006147	polr2d	100	92.361	Cynoglossus_semilaevis
ENSHCOG00000006425	polr2d	100	91.667	ENSCVAG00000000779	polr2d	100	91.667	Cyprinodon_variegatus
ENSHCOG00000006425	polr2d	100	92.254	ENSDARG00000076509	polr2d	100	92.254	Danio_rerio
ENSHCOG00000006425	polr2d	100	88.028	ENSDNOG00000008527	POLR2D	100	88.028	Dasypus_novemcinctus
ENSHCOG00000006425	polr2d	100	88.028	ENSDORG00000026897	Polr2d	100	88.028	Dipodomys_ordii
ENSHCOG00000006425	polr2d	94	75.940	FBgn0263757	Rpb4	96	75.940	Drosophila_melanogaster
ENSHCOG00000006425	polr2d	100	87.324	ENSEBUG00000007675	polr2d	100	87.324	Eptatretus_burgeri
ENSHCOG00000006425	polr2d	100	88.732	ENSEASG00005007103	POLR2D	100	88.732	Equus_asinus_asinus
ENSHCOG00000006425	polr2d	100	88.732	ENSECAG00000000556	POLR2D	100	88.732	Equus_caballus
ENSHCOG00000006425	polr2d	98	92.806	ENSELUG00000005928	polr2d	97	92.806	Esox_lucius
ENSHCOG00000006425	polr2d	100	88.732	ENSFCAG00000027816	POLR2D	100	88.732	Felis_catus
ENSHCOG00000006425	polr2d	100	88.732	ENSFALG00000003528	POLR2D	100	88.732	Ficedula_albicollis
ENSHCOG00000006425	polr2d	100	87.324	ENSFDAG00000007217	POLR2D	100	87.324	Fukomys_damarensis
ENSHCOG00000006425	polr2d	100	90.210	ENSGMOG00000001823	polr2d	99	90.210	Gadus_morhua
ENSHCOG00000006425	polr2d	100	88.732	ENSGALG00000002057	POLR2D	100	88.732	Gallus_gallus
ENSHCOG00000006425	polr2d	100	92.361	ENSGAFG00000016932	polr2d	71	92.361	Gambusia_affinis
ENSHCOG00000006425	polr2d	100	92.361	ENSGACG00000004639	polr2d	100	92.361	Gasterosteus_aculeatus
ENSHCOG00000006425	polr2d	100	88.732	ENSGAGG00000021308	POLR2D	100	88.732	Gopherus_agassizii
ENSHCOG00000006425	polr2d	100	88.732	ENSGGOG00000004723	POLR2D	100	88.732	Gorilla_gorilla
ENSHCOG00000006425	polr2d	100	88.028	ENSHGLG00000016570	Polr2d	100	88.028	Heterocephalus_glaber_female
ENSHCOG00000006425	polr2d	100	88.028	ENSHGLG00100013785	Polr2d	100	88.028	Heterocephalus_glaber_male
ENSHCOG00000006425	polr2d	100	91.549	ENSIPUG00000011192	polr2d	100	91.549	Ictalurus_punctatus
ENSHCOG00000006425	polr2d	100	87.324	ENSSTOG00000023329	POLR2D	100	87.324	Ictidomys_tridecemlineatus
ENSHCOG00000006425	polr2d	82	86.325	ENSJJAG00000005723	-	94	86.325	Jaculus_jaculus
ENSHCOG00000006425	polr2d	100	88.028	ENSJJAG00000015053	-	100	88.028	Jaculus_jaculus
ENSHCOG00000006425	polr2d	100	80.282	ENSJJAG00000000783	-	100	80.282	Jaculus_jaculus
ENSHCOG00000006425	polr2d	86	92.623	ENSKMAG00000010677	polr2d	68	92.623	Kryptolebias_marmoratus
ENSHCOG00000006425	polr2d	100	90.845	ENSLACG00000017253	POLR2D	100	90.845	Latimeria_chalumnae
ENSHCOG00000006425	polr2d	100	90.278	ENSLOCG00000009106	polr2d	100	90.278	Lepisosteus_oculatus
ENSHCOG00000006425	polr2d	100	88.028	ENSLAFG00000001848	POLR2D	100	88.028	Loxodonta_africana
ENSHCOG00000006425	polr2d	100	88.028	ENSMFAG00000031937	POLR2D	100	88.028	Macaca_fascicularis
ENSHCOG00000006425	polr2d	100	88.028	ENSMMUG00000001989	POLR2D	100	88.028	Macaca_mulatta
ENSHCOG00000006425	polr2d	100	88.028	ENSMNEG00000035505	POLR2D	100	88.028	Macaca_nemestrina
ENSHCOG00000006425	polr2d	100	88.028	ENSMLEG00000035827	POLR2D	100	88.028	Mandrillus_leucophaeus
ENSHCOG00000006425	polr2d	100	88.732	ENSMGAG00000001248	POLR2D	100	88.732	Meleagris_gallopavo
ENSHCOG00000006425	polr2d	100	88.028	ENSMAUG00000014518	Polr2d	100	88.028	Mesocricetus_auratus
ENSHCOG00000006425	polr2d	100	88.732	ENSMICG00000009931	POLR2D	100	88.732	Microcebus_murinus
ENSHCOG00000006425	polr2d	100	85.915	ENSMOCG00000019367	Polr2d	100	85.915	Microtus_ochrogaster
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025036	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025033	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025031	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.239	ENSMODG00000025035	-	100	73.239	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.239	ENSMODG00000025034	-	100	73.239	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	72.535	ENSMODG00000025032	-	100	72.535	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025030	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	89.437	ENSMODG00000018653	-	100	89.437	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025028	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.239	ENSMODG00000025029	-	100	73.239	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025026	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	73.944	ENSMODG00000025027	-	100	73.944	Monodelphis_domestica
ENSHCOG00000006425	polr2d	100	93.056	ENSMALG00000018266	polr2d	100	93.056	Monopterus_albus
ENSHCOG00000006425	polr2d	100	88.732	MGP_CAROLIEiJ_G0022066	Polr2d	100	88.732	Mus_caroli
ENSHCOG00000006425	polr2d	100	88.732	ENSMUSG00000024258	Polr2d	100	88.732	Mus_musculus
ENSHCOG00000006425	polr2d	100	88.732	MGP_PahariEiJ_G0018800	Polr2d	100	88.732	Mus_pahari
ENSHCOG00000006425	polr2d	100	88.732	MGP_SPRETEiJ_G0022977	Polr2d	100	88.732	Mus_spretus
ENSHCOG00000006425	polr2d	100	88.732	ENSMPUG00000016685	POLR2D	100	88.732	Mustela_putorius_furo
ENSHCOG00000006425	polr2d	83	91.525	ENSMLUG00000006862	POLR2D	100	91.525	Myotis_lucifugus
ENSHCOG00000006425	polr2d	100	88.732	ENSNGAG00000014862	Polr2d	100	88.732	Nannospalax_galili
ENSHCOG00000006425	polr2d	100	88.732	ENSNLEG00000027191	POLR2D	100	88.732	Nomascus_leucogenys
ENSHCOG00000006425	polr2d	82	90.598	ENSOPRG00000005327	POLR2D	100	90.598	Ochotona_princeps
ENSHCOG00000006425	polr2d	100	88.028	ENSODEG00000005262	POLR2D	100	88.028	Octodon_degus
ENSHCOG00000006425	polr2d	100	93.750	ENSONIG00000017290	polr2d	100	93.750	Oreochromis_niloticus
ENSHCOG00000006425	polr2d	83	92.373	ENSOANG00000013216	POLR2D	100	92.373	Ornithorhynchus_anatinus
ENSHCOG00000006425	polr2d	100	82.517	ENSOCUG00000021449	-	100	82.517	Oryctolagus_cuniculus
ENSHCOG00000006425	polr2d	100	85.915	ENSOCUG00000023403	-	100	85.915	Oryctolagus_cuniculus
ENSHCOG00000006425	polr2d	100	93.056	ENSORLG00000005266	polr2d	100	93.056	Oryzias_latipes
ENSHCOG00000006425	polr2d	100	92.361	ENSORLG00020006647	polr2d	100	92.361	Oryzias_latipes_hni
ENSHCOG00000006425	polr2d	100	93.056	ENSORLG00015003222	polr2d	100	93.056	Oryzias_latipes_hsok
ENSHCOG00000006425	polr2d	100	93.750	ENSOMEG00000018915	polr2d	100	93.750	Oryzias_melastigma
ENSHCOG00000006425	polr2d	100	87.500	ENSOGAG00000017118	POLR2D	100	87.500	Otolemur_garnettii
ENSHCOG00000006425	polr2d	100	88.028	ENSOARG00000015995	POLR2D	100	88.028	Ovis_aries
ENSHCOG00000006425	polr2d	100	88.732	ENSPPRG00000020222	POLR2D	100	88.732	Panthera_pardus
ENSHCOG00000006425	polr2d	100	88.732	ENSPTIG00000018618	POLR2D	100	88.732	Panthera_tigris_altaica
ENSHCOG00000006425	polr2d	100	88.732	ENSPTRG00000012436	POLR2D	100	88.732	Pan_troglodytes
ENSHCOG00000006425	polr2d	100	88.028	ENSPANG00000018602	POLR2D	100	88.028	Papio_anubis
ENSHCOG00000006425	polr2d	100	91.667	ENSPKIG00000012166	polr2d	100	91.667	Paramormyrops_kingsleyae
ENSHCOG00000006425	polr2d	83	92.373	ENSPSIG00000002873	POLR2D	100	92.373	Pelodiscus_sinensis
ENSHCOG00000006425	polr2d	100	88.732	ENSPEMG00000018244	Polr2d	100	88.732	Peromyscus_maniculatus_bairdii
ENSHCOG00000006425	polr2d	100	84.507	ENSPMAG00000005021	polr2d	99	84.507	Petromyzon_marinus
ENSHCOG00000006425	polr2d	100	92.361	ENSPFOG00000008969	polr2d	100	92.361	Poecilia_formosa
ENSHCOG00000006425	polr2d	100	92.361	ENSPLAG00000017210	polr2d	100	92.361	Poecilia_latipinna
ENSHCOG00000006425	polr2d	100	92.361	ENSPMEG00000005160	polr2d	100	92.361	Poecilia_mexicana
ENSHCOG00000006425	polr2d	73	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSHCOG00000006425	polr2d	100	88.732	ENSPPYG00000012759	POLR2D	100	88.732	Pongo_abelii
ENSHCOG00000006425	polr2d	100	88.028	ENSPCAG00000001396	POLR2D	100	88.028	Procavia_capensis
ENSHCOG00000006425	polr2d	100	88.732	ENSPCOG00000022076	POLR2D	100	88.732	Propithecus_coquereli
ENSHCOG00000006425	polr2d	100	88.028	ENSPVAG00000004002	POLR2D	100	88.028	Pteropus_vampyrus
ENSHCOG00000006425	polr2d	100	90.909	ENSPNAG00000018246	polr2d	100	90.909	Pygocentrus_nattereri
ENSHCOG00000006425	polr2d	100	88.732	ENSRNOG00000016231	Polr2d	100	88.732	Rattus_norvegicus
ENSHCOG00000006425	polr2d	100	88.732	ENSRBIG00000039326	POLR2D	100	88.732	Rhinopithecus_bieti
ENSHCOG00000006425	polr2d	100	88.732	ENSRROG00000023289	POLR2D	100	88.732	Rhinopithecus_roxellana
ENSHCOG00000006425	polr2d	100	89.437	ENSSHAG00000014817	-	100	89.437	Sarcophilus_harrisii
ENSHCOG00000006425	polr2d	92	95.420	ENSSFOG00015024204	polr2d	100	91.667	Scleropages_formosus
ENSHCOG00000006425	polr2d	100	93.056	ENSSDUG00000006060	polr2d	100	93.056	Seriola_dumerili
ENSHCOG00000006425	polr2d	95	96.296	ENSSLDG00000024485	polr2d	100	91.724	Seriola_lalandi_dorsalis
ENSHCOG00000006425	polr2d	82	90.598	ENSSARG00000009037	POLR2D	100	90.598	Sorex_araneus
ENSHCOG00000006425	polr2d	100	88.732	ENSSPUG00000014915	POLR2D	100	88.732	Sphenodon_punctatus
ENSHCOG00000006425	polr2d	100	93.750	ENSSPAG00000013386	polr2d	100	93.750	Stegastes_partitus
ENSHCOG00000006425	polr2d	100	88.732	ENSSSCG00000039230	POLR2D	100	88.732	Sus_scrofa
ENSHCOG00000006425	polr2d	100	88.732	ENSTGUG00000005773	POLR2D	99	88.732	Taeniopygia_guttata
ENSHCOG00000006425	polr2d	100	91.549	ENSTRUG00000004740	polr2d	100	91.549	Takifugu_rubripes
ENSHCOG00000006425	polr2d	100	93.662	ENSTNIG00000011210	polr2d	100	93.662	Tetraodon_nigroviridis
ENSHCOG00000006425	polr2d	82	91.453	ENSTBEG00000006081	POLR2D	100	91.453	Tupaia_belangeri
ENSHCOG00000006425	polr2d	82	91.453	ENSTTRG00000010055	POLR2D	100	91.453	Tursiops_truncatus
ENSHCOG00000006425	polr2d	92	90.769	ENSUAMG00000024374	POLR2D	98	90.769	Ursus_americanus
ENSHCOG00000006425	polr2d	100	79.577	ENSUMAG00000008280	POLR2D	100	93.269	Ursus_maritimus
ENSHCOG00000006425	polr2d	82	91.453	ENSVPAG00000007239	POLR2D	100	91.453	Vicugna_pacos
ENSHCOG00000006425	polr2d	100	88.732	ENSVVUG00000008616	POLR2D	100	88.732	Vulpes_vulpes
ENSHCOG00000006425	polr2d	100	85.915	ENSXETG00000002955	polr2d	100	85.915	Xenopus_tropicalis
ENSHCOG00000006425	polr2d	73	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSHCOG00000006425	polr2d	73	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus