EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006450 (Gene tree)
Gene ID: 109532601
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5983 bases
Position: chrKV880455.1:217866-223848
Accession: 109532601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004890	RtcB	PF01139.17	4.3e-143	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006296	-	1524	XM_019897524	ENSHCOP00000004890	507 (aa)	XP_019753083	-

Gene Model

Click here to download ENSHCOG00000006450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006450	rtcb	100	91.519	ENSG00000100220	RTCB	100	91.519	Homo_sapiens
ENSHCOG00000006450	rtcb	100	94.477	ENSAPOG00000006040	rtcb	100	94.477	Acanthochromis_polyacanthus
ENSHCOG00000006450	rtcb	100	91.519	ENSAMEG00000016152	RTCB	100	91.519	Ailuropoda_melanoleuca
ENSHCOG00000006450	rtcb	100	88.955	ENSACIG00000009083	rtcb	100	88.955	Amphilophus_citrinellus
ENSHCOG00000006450	rtcb	100	94.675	ENSAOCG00000005662	rtcb	100	95.887	Amphiprion_ocellaris
ENSHCOG00000006450	rtcb	96	90.593	ENSAPEG00000024653	rtcb	100	90.593	Amphiprion_percula
ENSHCOG00000006450	rtcb	100	94.675	ENSAPEG00000024701	rtcb	100	94.675	Amphiprion_percula
ENSHCOG00000006450	rtcb	100	95.069	ENSATEG00000000618	rtcb	100	95.069	Anabas_testudineus
ENSHCOG00000006450	rtcb	100	89.443	ENSACAG00000014817	RTCB	100	89.443	Anolis_carolinensis
ENSHCOG00000006450	rtcb	72	88.889	ENSANAG00000023724	-	88	88.889	Aotus_nancymaae
ENSHCOG00000006450	rtcb	100	76.529	ENSANAG00000018191	-	91	76.529	Aotus_nancymaae
ENSHCOG00000006450	rtcb	100	92.505	ENSACLG00000008367	rtcb	100	93.723	Astatotilapia_calliptera
ENSHCOG00000006450	rtcb	100	92.899	ENSAMXG00000042320	rtcb	100	92.899	Astyanax_mexicanus
ENSHCOG00000006450	rtcb	100	91.519	ENSBTAG00000011070	RTCB	100	91.519	Bos_taurus
ENSHCOG00000006450	rtcb	100	73.373	WBGene00008877	rtcb-1	100	73.373	Caenorhabditis_elegans
ENSHCOG00000006450	rtcb	100	91.716	ENSCJAG00000006128	RTCB	100	91.716	Callithrix_jacchus
ENSHCOG00000006450	rtcb	100	91.519	ENSCAFG00000001785	RTCB	100	91.519	Canis_familiaris
ENSHCOG00000006450	rtcb	100	87.179	ENSCAFG00000010789	-	100	87.179	Canis_familiaris
ENSHCOG00000006450	rtcb	87	87.783	ENSCAFG00020018953	-	99	87.783	Canis_lupus_dingo
ENSHCOG00000006450	rtcb	100	91.519	ENSCAFG00020004890	-	100	91.519	Canis_lupus_dingo
ENSHCOG00000006450	rtcb	100	91.519	ENSCHIG00000027009	-	100	91.519	Capra_hircus
ENSHCOG00000006450	rtcb	100	92.308	ENSTSYG00000012320	RTCB	100	92.308	Carlito_syrichta
ENSHCOG00000006450	rtcb	94	91.441	ENSCAPG00000011647	RTCB	96	91.441	Cavia_aperea
ENSHCOG00000006450	rtcb	100	91.716	ENSCCAG00000000618	RTCB	100	91.716	Cebus_capucinus
ENSHCOG00000006450	rtcb	100	91.321	ENSCATG00000033424	RTCB	100	91.321	Cercocebus_atys
ENSHCOG00000006450	rtcb	100	91.321	ENSCLAG00000007997	RTCB	100	91.321	Chinchilla_lanigera
ENSHCOG00000006450	rtcb	100	91.519	ENSCSAG00000008351	RTCB	100	91.519	Chlorocebus_sabaeus
ENSHCOG00000006450	rtcb	100	78.107	ENSCHOG00000009123	RTCB	100	78.107	Choloepus_hoffmanni
ENSHCOG00000006450	rtcb	100	91.913	ENSCPBG00000023184	RTCB	100	91.913	Chrysemys_picta_bellii
ENSHCOG00000006450	rtcb	100	81.262	ENSCING00000003830	-	100	81.262	Ciona_intestinalis
ENSHCOG00000006450	rtcb	100	81.854	ENSCSAVG00000008124	-	99	81.854	Ciona_savignyi
ENSHCOG00000006450	rtcb	100	87.968	ENSCANG00000001891	RTCB	100	87.968	Colobus_angolensis_palliatus
ENSHCOG00000006450	rtcb	100	91.321	ENSCGRG00001011173	Rtcb	100	91.321	Cricetulus_griseus_chok1gshd
ENSHCOG00000006450	rtcb	93	92.389	ENSCGRG00000009587	-	96	92.389	Cricetulus_griseus_crigri
ENSHCOG00000006450	rtcb	100	93.688	ENSCSEG00000003986	rtcb	100	93.688	Cynoglossus_semilaevis
ENSHCOG00000006450	rtcb	82	93.780	ENSCVAG00000000569	rtcb	95	93.780	Cyprinodon_variegatus
ENSHCOG00000006450	rtcb	100	94.280	ENSDARG00000101047	rtcb	100	94.280	Danio_rerio
ENSHCOG00000006450	rtcb	80	89.435	ENSDNOG00000012425	RTCB	99	89.435	Dasypus_novemcinctus
ENSHCOG00000006450	rtcb	100	91.124	ENSDORG00000010855	Rtcb	100	91.124	Dipodomys_ordii
ENSHCOG00000006450	rtcb	99	83.960	FBgn0032781	RtcB	99	83.960	Drosophila_melanogaster
ENSHCOG00000006450	rtcb	100	85.602	ENSETEG00000001988	RTCB	100	85.602	Echinops_telfairi
ENSHCOG00000006450	rtcb	100	84.024	ENSEBUG00000014235	rtcb	100	84.024	Eptatretus_burgeri
ENSHCOG00000006450	rtcb	100	91.716	ENSEASG00005019059	RTCB	100	91.716	Equus_asinus_asinus
ENSHCOG00000006450	rtcb	100	91.716	ENSECAG00000023998	RTCB	100	91.716	Equus_caballus
ENSHCOG00000006450	rtcb	89	83.964	ENSEEUG00000006251	RTCB	100	83.964	Erinaceus_europaeus
ENSHCOG00000006450	rtcb	100	81.921	ENSELUG00000009275	rtcb	100	81.921	Esox_lucius
ENSHCOG00000006450	rtcb	100	91.519	ENSFCAG00000026480	RTCB	100	91.519	Felis_catus
ENSHCOG00000006450	rtcb	100	92.702	ENSFALG00000013334	RTCB	100	92.702	Ficedula_albicollis
ENSHCOG00000006450	rtcb	100	91.321	ENSFDAG00000018150	RTCB	100	91.321	Fukomys_damarensis
ENSHCOG00000006450	rtcb	100	94.280	ENSFHEG00000009595	rtcb	100	94.280	Fundulus_heteroclitus
ENSHCOG00000006450	rtcb	100	91.716	ENSGMOG00000018882	rtcb	100	91.716	Gadus_morhua
ENSHCOG00000006450	rtcb	100	92.505	ENSGALG00000012611	RTCB	100	92.505	Gallus_gallus
ENSHCOG00000006450	rtcb	100	93.491	ENSGAFG00000004198	rtcb	100	93.491	Gambusia_affinis
ENSHCOG00000006450	rtcb	100	94.083	ENSGACG00000000586	rtcb	100	94.083	Gasterosteus_aculeatus
ENSHCOG00000006450	rtcb	93	91.102	ENSGAGG00000019133	RTCB	98	91.102	Gopherus_agassizii
ENSHCOG00000006450	rtcb	100	91.519	ENSGGOG00000011402	RTCB	100	91.519	Gorilla_gorilla
ENSHCOG00000006450	rtcb	100	92.505	ENSHBUG00000020571	rtcb	100	92.505	Haplochromis_burtoni
ENSHCOG00000006450	rtcb	100	91.321	ENSHGLG00000004492	RTCB	100	91.321	Heterocephalus_glaber_female
ENSHCOG00000006450	rtcb	93	66.245	ENSHGLG00000001066	-	99	66.245	Heterocephalus_glaber_female
ENSHCOG00000006450	rtcb	100	91.321	ENSHGLG00100008965	RTCB	100	91.321	Heterocephalus_glaber_male
ENSHCOG00000006450	rtcb	100	92.899	ENSIPUG00000015443	rtcb	100	92.899	Ictalurus_punctatus
ENSHCOG00000006450	rtcb	100	91.519	ENSSTOG00000003878	RTCB	100	91.519	Ictidomys_tridecemlineatus
ENSHCOG00000006450	rtcb	100	91.716	ENSJJAG00000010667	Rtcb	100	91.716	Jaculus_jaculus
ENSHCOG00000006450	rtcb	100	94.872	ENSKMAG00000013178	rtcb	100	94.872	Kryptolebias_marmoratus
ENSHCOG00000006450	rtcb	100	94.083	ENSLBEG00000010566	RTCB	100	94.083	Labrus_bergylta
ENSHCOG00000006450	rtcb	100	92.899	ENSLBEG00000000214	rtcb	100	92.899	Labrus_bergylta
ENSHCOG00000006450	rtcb	100	92.110	ENSLACG00000013033	RTCB	100	92.110	Latimeria_chalumnae
ENSHCOG00000006450	rtcb	100	93.491	ENSLOCG00000016515	rtcb	99	93.491	Lepisosteus_oculatus
ENSHCOG00000006450	rtcb	100	91.716	ENSLAFG00000002082	RTCB	100	91.716	Loxodonta_africana
ENSHCOG00000006450	rtcb	100	91.519	ENSMFAG00000034419	RTCB	100	91.519	Macaca_fascicularis
ENSHCOG00000006450	rtcb	100	91.519	ENSMMUG00000006720	RTCB	100	91.519	Macaca_mulatta
ENSHCOG00000006450	rtcb	100	91.519	ENSMNEG00000040669	RTCB	100	91.519	Macaca_nemestrina
ENSHCOG00000006450	rtcb	100	91.321	ENSMLEG00000040505	RTCB	100	91.321	Mandrillus_leucophaeus
ENSHCOG00000006450	rtcb	100	94.477	ENSMAMG00000020676	rtcb	100	94.477	Mastacembelus_armatus
ENSHCOG00000006450	rtcb	100	92.505	ENSMZEG00005018942	rtcb	100	92.505	Maylandia_zebra
ENSHCOG00000006450	rtcb	100	92.141	ENSMGAG00000012805	RTCB	100	92.141	Meleagris_gallopavo
ENSHCOG00000006450	rtcb	60	94.681	ENSMAUG00000008301	Rtcb	100	94.681	Mesocricetus_auratus
ENSHCOG00000006450	rtcb	100	72.387	ENSMICG00000036677	-	100	72.387	Microcebus_murinus
ENSHCOG00000006450	rtcb	100	91.716	ENSMICG00000013303	-	100	91.716	Microcebus_murinus
ENSHCOG00000006450	rtcb	100	91.913	ENSMOCG00000002440	Rtcb	100	91.913	Microtus_ochrogaster
ENSHCOG00000006450	rtcb	100	94.872	ENSMMOG00000005987	rtcb	100	94.872	Mola_mola
ENSHCOG00000006450	rtcb	100	92.110	ENSMODG00000001414	RTCB	100	92.110	Monodelphis_domestica
ENSHCOG00000006450	rtcb	100	94.675	ENSMALG00000007603	rtcb	100	94.675	Monopterus_albus
ENSHCOG00000006450	rtcb	100	91.913	MGP_CAROLIEiJ_G0015689	Rtcb	100	91.913	Mus_caroli
ENSHCOG00000006450	rtcb	100	91.913	ENSMUSG00000001783	Rtcb	100	91.913	Mus_musculus
ENSHCOG00000006450	rtcb	100	91.913	MGP_PahariEiJ_G0031396	Rtcb	100	91.913	Mus_pahari
ENSHCOG00000006450	rtcb	100	91.913	MGP_SPRETEiJ_G0016507	Rtcb	100	91.913	Mus_spretus
ENSHCOG00000006450	rtcb	100	91.519	ENSMPUG00000012285	RTCB	100	91.519	Mustela_putorius_furo
ENSHCOG00000006450	rtcb	100	89.194	ENSMLUG00000007803	RTCB	100	89.194	Myotis_lucifugus
ENSHCOG00000006450	rtcb	73	88.276	ENSNGAG00000005093	Rtcb	100	88.276	Nannospalax_galili
ENSHCOG00000006450	rtcb	100	92.702	ENSNBRG00000017202	rtcb	100	92.702	Neolamprologus_brichardi
ENSHCOG00000006450	rtcb	100	91.519	ENSNLEG00000004960	RTCB	100	91.519	Nomascus_leucogenys
ENSHCOG00000006450	rtcb	100	68.442	ENSMEUG00000007809	-	100	68.442	Notamacropus_eugenii
ENSHCOG00000006450	rtcb	72	92.105	ENSOPRG00000003488	RTCB	78	92.105	Ochotona_princeps
ENSHCOG00000006450	rtcb	100	60.947	ENSODEG00000005042	-	100	60.947	Octodon_degus
ENSHCOG00000006450	rtcb	82	90.741	ENSODEG00000013033	-	100	90.741	Octodon_degus
ENSHCOG00000006450	rtcb	100	93.886	ENSONIG00000007474	rtcb	100	93.886	Oreochromis_niloticus
ENSHCOG00000006450	rtcb	100	91.519	ENSOANG00000005524	RTCB	100	91.519	Ornithorhynchus_anatinus
ENSHCOG00000006450	rtcb	93	91.525	ENSOCUG00000008270	RTCB	96	91.525	Oryctolagus_cuniculus
ENSHCOG00000006450	rtcb	100	94.280	ENSORLG00000020093	rtcb	100	94.280	Oryzias_latipes
ENSHCOG00000006450	rtcb	100	94.477	ENSORLG00020003706	rtcb	99	95.597	Oryzias_latipes_hni
ENSHCOG00000006450	rtcb	100	94.477	ENSORLG00015002968	rtcb	100	94.477	Oryzias_latipes_hsok
ENSHCOG00000006450	rtcb	100	94.083	ENSOMEG00000021278	rtcb	100	94.083	Oryzias_melastigma
ENSHCOG00000006450	rtcb	100	91.124	ENSOGAG00000001425	RTCB	100	91.124	Otolemur_garnettii
ENSHCOG00000006450	rtcb	100	91.519	ENSOARG00000018008	RTCB	100	91.519	Ovis_aries
ENSHCOG00000006450	rtcb	100	91.519	ENSPPAG00000028667	RTCB	100	91.519	Pan_paniscus
ENSHCOG00000006450	rtcb	100	91.519	ENSPPRG00000004038	RTCB	100	91.519	Panthera_pardus
ENSHCOG00000006450	rtcb	94	87.421	ENSPTIG00000020499	RTCB	97	88.470	Panthera_tigris_altaica
ENSHCOG00000006450	rtcb	100	91.519	ENSPTRG00000014287	RTCB	100	91.519	Pan_troglodytes
ENSHCOG00000006450	rtcb	100	91.519	ENSPANG00000016035	RTCB	100	91.519	Papio_anubis
ENSHCOG00000006450	rtcb	100	93.097	ENSPKIG00000001881	rtcb	100	93.097	Paramormyrops_kingsleyae
ENSHCOG00000006450	rtcb	91	91.991	ENSPSIG00000011690	RTCB	100	91.991	Pelodiscus_sinensis
ENSHCOG00000006450	rtcb	100	93.688	ENSPMGG00000016672	rtcb	100	93.688	Periophthalmus_magnuspinnatus
ENSHCOG00000006450	rtcb	100	91.913	ENSPEMG00000019548	Rtcb	100	91.913	Peromyscus_maniculatus_bairdii
ENSHCOG00000006450	rtcb	100	89.744	ENSPMAG00000005657	rtcb	100	89.744	Petromyzon_marinus
ENSHCOG00000006450	rtcb	100	91.913	ENSPCIG00000009467	RTCB	100	91.913	Phascolarctos_cinereus
ENSHCOG00000006450	rtcb	100	93.886	ENSPFOG00000003058	rtcb	100	93.886	Poecilia_formosa
ENSHCOG00000006450	rtcb	100	93.688	ENSPLAG00000017663	rtcb	100	93.688	Poecilia_latipinna
ENSHCOG00000006450	rtcb	100	93.886	ENSPMEG00000006227	rtcb	100	93.886	Poecilia_mexicana
ENSHCOG00000006450	rtcb	100	93.491	ENSPREG00000018467	rtcb	100	93.491	Poecilia_reticulata
ENSHCOG00000006450	rtcb	100	91.519	ENSPPYG00000011752	RTCB	100	91.519	Pongo_abelii
ENSHCOG00000006450	rtcb	93	75.738	ENSPCAG00000013641	RTCB	100	75.738	Procavia_capensis
ENSHCOG00000006450	rtcb	100	91.716	ENSPCOG00000017243	RTCB	100	91.716	Propithecus_coquereli
ENSHCOG00000006450	rtcb	93	91.102	ENSPVAG00000002380	RTCB	100	91.102	Pteropus_vampyrus
ENSHCOG00000006450	rtcb	100	92.505	ENSPNYG00000022760	rtcb	100	92.505	Pundamilia_nyererei
ENSHCOG00000006450	rtcb	100	92.505	ENSPNAG00000009209	rtcb	100	92.505	Pygocentrus_nattereri
ENSHCOG00000006450	rtcb	100	91.913	ENSRNOG00000004813	Rtcb	100	91.913	Rattus_norvegicus
ENSHCOG00000006450	rtcb	100	83.465	ENSRBIG00000042090	RTCB	100	83.465	Rhinopithecus_bieti
ENSHCOG00000006450	rtcb	100	86.982	ENSSBOG00000020085	-	100	86.982	Saimiri_boliviensis_boliviensis
ENSHCOG00000006450	rtcb	94	92.437	ENSSHAG00000016277	RTCB	100	92.437	Sarcophilus_harrisii
ENSHCOG00000006450	rtcb	100	91.124	ENSSFOG00015011572	RTCB	100	91.124	Scleropages_formosus
ENSHCOG00000006450	rtcb	100	93.688	ENSSFOG00015000763	rtcb	100	93.688	Scleropages_formosus
ENSHCOG00000006450	rtcb	100	91.716	ENSSMAG00000005096	rtcb	100	91.716	Scophthalmus_maximus
ENSHCOG00000006450	rtcb	100	93.886	ENSSDUG00000012605	rtcb	100	93.886	Seriola_dumerili
ENSHCOG00000006450	rtcb	100	93.886	ENSSLDG00000019458	rtcb	100	93.886	Seriola_lalandi_dorsalis
ENSHCOG00000006450	rtcb	66	91.429	ENSSARG00000004799	-	70	91.429	Sorex_araneus
ENSHCOG00000006450	rtcb	100	90.927	ENSSPUG00000012814	RTCB	100	90.927	Sphenodon_punctatus
ENSHCOG00000006450	rtcb	100	94.675	ENSSPAG00000004623	rtcb	100	94.675	Stegastes_partitus
ENSHCOG00000006450	rtcb	100	91.519	ENSSSCG00000000158	RTCB	100	91.519	Sus_scrofa
ENSHCOG00000006450	rtcb	100	92.702	ENSTGUG00000010947	RTCB	99	92.702	Taeniopygia_guttata
ENSHCOG00000006450	rtcb	91	94.805	ENSTRUG00000009880	rtcb	100	94.805	Takifugu_rubripes
ENSHCOG00000006450	rtcb	100	93.886	ENSTNIG00000002484	rtcb	100	93.886	Tetraodon_nigroviridis
ENSHCOG00000006450	rtcb	100	79.290	ENSTBEG00000004418	RTCB	100	79.290	Tupaia_belangeri
ENSHCOG00000006450	rtcb	93	90.678	ENSTTRG00000006417	RTCB	100	90.678	Tursiops_truncatus
ENSHCOG00000006450	rtcb	100	91.519	ENSUAMG00000022792	RTCB	100	91.519	Ursus_americanus
ENSHCOG00000006450	rtcb	100	91.519	ENSUMAG00000017225	RTCB	100	91.519	Ursus_maritimus
ENSHCOG00000006450	rtcb	100	91.321	ENSVPAG00000005375	RTCB	100	91.321	Vicugna_pacos
ENSHCOG00000006450	rtcb	100	91.519	ENSVVUG00000023408	RTCB	100	91.687	Vulpes_vulpes
ENSHCOG00000006450	rtcb	100	91.321	ENSXETG00000011523	rtcb	100	91.321	Xenopus_tropicalis
ENSHCOG00000006450	rtcb	100	93.886	ENSXMAG00000002855	rtcb	100	93.886	Xiphophorus_maculatus