EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006516 (Gene tree)
Gene ID: -
Gene Symbol: zmat4b
Alias: si:dkey-159k22.3|zmat4
Full Name: zinc finger%2C matrin-type 4b
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 22355 bases
Position: chrKV880233.1:463001-485355
Accession: ZDB-GENE-091118-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004955	zf-met	PF12874.7	2.2e-14	1	2
ENSHCOP00000004955	zf-met	PF12874.7	2.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006181	-	378	-	ENSHCOP00000004955	125 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000006516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006516	zmat4b	100	65.152	ENSHCOG00000018086	zgc:171482	99	65.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006516	zmat4b	94	83.051	ENSG00000165061	ZMAT4	74	88.235	Homo_sapiens
ENSHCOG00000006516	zmat4b	92	83.478	ENSAMEG00000002758	ZMAT4	51	83.478	Ailuropoda_melanoleuca
ENSHCOG00000006516	zmat4b	93	94.828	ENSACIG00000009080	zmat4a	55	94.828	Amphilophus_citrinellus
ENSHCOG00000006516	zmat4b	97	93.388	ENSATEG00000012630	zmat4a	85	93.388	Anabas_testudineus
ENSHCOG00000006516	zmat4b	92	82.609	ENSACAG00000005388	ZMAT4	55	82.609	Anolis_carolinensis
ENSHCOG00000006516	zmat4b	94	83.051	ENSANAG00000027926	ZMAT4	77	83.051	Aotus_nancymaae
ENSHCOG00000006516	zmat4b	93	93.966	ENSACLG00000005038	zmat4a	50	93.966	Astatotilapia_calliptera
ENSHCOG00000006516	zmat4b	91	95.614	ENSAMXG00000035337	zmat4a	75	95.614	Astyanax_mexicanus
ENSHCOG00000006516	zmat4b	92	83.478	ENSBTAG00000017420	ZMAT4	50	83.478	Bos_taurus
ENSHCOG00000006516	zmat4b	92	83.478	ENSCAFG00000005744	ZMAT4	50	83.478	Canis_familiaris
ENSHCOG00000006516	zmat4b	92	83.478	ENSCHIG00000022017	ZMAT4	51	83.478	Capra_hircus
ENSHCOG00000006516	zmat4b	92	84.348	ENSCAPG00000014401	ZMAT4	50	84.348	Cavia_aperea
ENSHCOG00000006516	zmat4b	92	84.348	ENSCPOG00000015224	ZMAT4	50	84.348	Cavia_porcellus
ENSHCOG00000006516	zmat4b	94	83.051	ENSCCAG00000027437	ZMAT4	77	83.051	Cebus_capucinus
ENSHCOG00000006516	zmat4b	94	83.051	ENSCATG00000044978	ZMAT4	77	83.051	Cercocebus_atys
ENSHCOG00000006516	zmat4b	92	84.348	ENSCLAG00000000923	ZMAT4	50	84.348	Chinchilla_lanigera
ENSHCOG00000006516	zmat4b	92	84.348	ENSCSAG00000015108	ZMAT4	51	84.348	Chlorocebus_sabaeus
ENSHCOG00000006516	zmat4b	96	80.833	ENSCHOG00000003755	ZMAT4	53	80.833	Choloepus_hoffmanni
ENSHCOG00000006516	zmat4b	94	83.761	ENSCPBG00000002781	ZMAT4	76	82.203	Chrysemys_picta_bellii
ENSHCOG00000006516	zmat4b	92	83.478	ENSCGRG00001016583	Zmat4	50	83.478	Cricetulus_griseus_chok1gshd
ENSHCOG00000006516	zmat4b	92	83.478	ENSCGRG00000002696	Zmat4	79	88.889	Cricetulus_griseus_crigri
ENSHCOG00000006516	zmat4b	94	88.136	ENSDARG00000061419	zmat4b	61	88.136	Danio_rerio
ENSHCOG00000006516	zmat4b	98	90.984	ENSDARG00000092987	zmat4a	79	93.220	Danio_rerio
ENSHCOG00000006516	zmat4b	92	84.348	ENSDNOG00000001045	ZMAT4	51	84.348	Dasypus_novemcinctus
ENSHCOG00000006516	zmat4b	92	84.348	ENSDORG00000009300	Zmat4	50	84.348	Dipodomys_ordii
ENSHCOG00000006516	zmat4b	92	84.348	ENSEASG00005010447	ZMAT4	50	84.348	Equus_asinus_asinus
ENSHCOG00000006516	zmat4b	92	84.348	ENSECAG00000021550	ZMAT4	50	84.348	Equus_caballus
ENSHCOG00000006516	zmat4b	92	62.609	ENSEEUG00000002565	ZMAT4	51	62.609	Erinaceus_europaeus
ENSHCOG00000006516	zmat4b	99	93.220	ENSELUG00000005097	zmat4a	78	93.220	Esox_lucius
ENSHCOG00000006516	zmat4b	94	83.051	ENSFCAG00000012775	ZMAT4	77	83.051	Felis_catus
ENSHCOG00000006516	zmat4b	90	85.841	ENSFALG00000006455	ZMAT4	50	85.841	Ficedula_albicollis
ENSHCOG00000006516	zmat4b	93	95.690	ENSFHEG00000022872	zmat4b	52	95.690	Fundulus_heteroclitus
ENSHCOG00000006516	zmat4b	94	90.678	ENSGMOG00000007950	zmat4a	53	90.678	Gadus_morhua
ENSHCOG00000006516	zmat4b	95	82.500	ENSGALG00000003470	ZMAT4	53	82.500	Gallus_gallus
ENSHCOG00000006516	zmat4b	93	94.828	ENSGAFG00000013149	zmat4a	52	96.364	Gambusia_affinis
ENSHCOG00000006516	zmat4b	94	94.068	ENSGACG00000005515	zmat4a	77	94.068	Gasterosteus_aculeatus
ENSHCOG00000006516	zmat4b	94	82.203	ENSGAGG00000004799	ZMAT4	86	82.203	Gopherus_agassizii
ENSHCOG00000006516	zmat4b	94	83.051	ENSGGOG00000006633	ZMAT4	77	83.051	Gorilla_gorilla
ENSHCOG00000006516	zmat4b	92	84.348	ENSHGLG00000003246	ZMAT4	50	84.348	Heterocephalus_glaber_female
ENSHCOG00000006516	zmat4b	65	82.716	ENSHGLG00100000081	ZMAT4	51	82.716	Heterocephalus_glaber_male
ENSHCOG00000006516	zmat4b	95	87.395	ENSIPUG00000022248	zmat4	50	91.071	Ictalurus_punctatus
ENSHCOG00000006516	zmat4b	96	80.833	ENSJJAG00000013484	Zmat4	52	80.833	Jaculus_jaculus
ENSHCOG00000006516	zmat4b	92	81.739	ENSLACG00000006206	-	74	81.739	Latimeria_chalumnae
ENSHCOG00000006516	zmat4b	94	91.525	ENSLOCG00000015435	zmat4b	52	91.525	Lepisosteus_oculatus
ENSHCOG00000006516	zmat4b	92	85.217	ENSLAFG00000014753	ZMAT4	51	85.217	Loxodonta_africana
ENSHCOG00000006516	zmat4b	94	83.051	ENSMFAG00000043475	ZMAT4	77	83.051	Macaca_fascicularis
ENSHCOG00000006516	zmat4b	94	83.051	ENSMNEG00000042102	ZMAT4	77	83.051	Macaca_nemestrina
ENSHCOG00000006516	zmat4b	94	83.051	ENSMLEG00000034448	ZMAT4	77	83.051	Mandrillus_leucophaeus
ENSHCOG00000006516	zmat4b	100	88.800	ENSMAMG00000019914	zmat4a	83	88.800	Mastacembelus_armatus
ENSHCOG00000006516	zmat4b	90	85.841	ENSMGAG00000002288	ZMAT4	50	85.841	Meleagris_gallopavo
ENSHCOG00000006516	zmat4b	92	82.609	ENSMOCG00000015996	Zmat4	50	82.609	Microtus_ochrogaster
ENSHCOG00000006516	zmat4b	94	94.872	ENSMMOG00000012619	zmat4a	86	94.872	Mola_mola
ENSHCOG00000006516	zmat4b	92	83.478	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSHCOG00000006516	zmat4b	92	83.478	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSHCOG00000006516	zmat4b	92	83.478	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSHCOG00000006516	zmat4b	92	83.478	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSHCOG00000006516	zmat4b	92	84.348	ENSNGAG00000015545	Zmat4	50	84.348	Nannospalax_galili
ENSHCOG00000006516	zmat4b	94	94.017	ENSNBRG00000011844	zmat4a	53	94.017	Neolamprologus_brichardi
ENSHCOG00000006516	zmat4b	94	83.051	ENSNLEG00000012564	ZMAT4	77	83.051	Nomascus_leucogenys
ENSHCOG00000006516	zmat4b	90	84.956	ENSMEUG00000000558	ZMAT4	50	84.956	Notamacropus_eugenii
ENSHCOG00000006516	zmat4b	92	84.348	ENSOPRG00000009257	ZMAT4	50	84.348	Ochotona_princeps
ENSHCOG00000006516	zmat4b	92	84.348	ENSODEG00000006439	ZMAT4	50	84.348	Octodon_degus
ENSHCOG00000006516	zmat4b	94	82.906	ENSOANG00000022431	ZMAT4	82	84.956	Ornithorhynchus_anatinus
ENSHCOG00000006516	zmat4b	92	84.348	ENSOCUG00000000977	ZMAT4	50	84.348	Oryctolagus_cuniculus
ENSHCOG00000006516	zmat4b	94	94.872	ENSORLG00000016169	zmat4b	80	94.872	Oryzias_latipes
ENSHCOG00000006516	zmat4b	94	94.068	ENSORLG00020019602	zmat4a	52	94.068	Oryzias_latipes_hni
ENSHCOG00000006516	zmat4b	94	94.068	ENSORLG00015009006	zmat4a	52	94.068	Oryzias_latipes_hsok
ENSHCOG00000006516	zmat4b	92	84.348	ENSOGAG00000012558	ZMAT4	51	84.348	Otolemur_garnettii
ENSHCOG00000006516	zmat4b	92	84.348	ENSPPAG00000042573	ZMAT4	56	88.235	Pan_paniscus
ENSHCOG00000006516	zmat4b	94	82.203	ENSPPRG00000007023	ZMAT4	77	82.203	Panthera_pardus
ENSHCOG00000006516	zmat4b	94	82.203	ENSPTIG00000019738	ZMAT4	77	82.203	Panthera_tigris_altaica
ENSHCOG00000006516	zmat4b	94	83.051	ENSPTRG00000020191	ZMAT4	77	83.051	Pan_troglodytes
ENSHCOG00000006516	zmat4b	94	83.051	ENSPANG00000014196	ZMAT4	77	83.051	Papio_anubis
ENSHCOG00000006516	zmat4b	96	80.000	ENSPKIG00000021792	zmat4b	79	80.000	Paramormyrops_kingsleyae
ENSHCOG00000006516	zmat4b	93	93.220	ENSPMGG00000001436	zmat4b	59	93.220	Periophthalmus_magnuspinnatus
ENSHCOG00000006516	zmat4b	90	61.062	ENSPMAG00000004582	zmat4a	73	61.062	Petromyzon_marinus
ENSHCOG00000006516	zmat4b	95	84.034	ENSPCIG00000028706	ZMAT4	70	84.034	Phascolarctos_cinereus
ENSHCOG00000006516	zmat4b	93	95.690	ENSPLAG00000019268	zmat4a	52	68.000	Poecilia_latipinna
ENSHCOG00000006516	zmat4b	93	95.690	ENSPMEG00000007870	zmat4a	50	95.690	Poecilia_mexicana
ENSHCOG00000006516	zmat4b	92	84.348	ENSPPYG00000018540	ZMAT4	50	84.348	Pongo_abelii
ENSHCOG00000006516	zmat4b	92	81.739	ENSPCAG00000004820	ZMAT4	50	81.739	Procavia_capensis
ENSHCOG00000006516	zmat4b	94	83.051	ENSPCOG00000007717	ZMAT4	77	83.051	Propithecus_coquereli
ENSHCOG00000006516	zmat4b	92	89.565	ENSPNAG00000023764	zmat4b	51	89.565	Pygocentrus_nattereri
ENSHCOG00000006516	zmat4b	92	83.478	ENSRNOG00000042690	Zmat4	50	83.478	Rattus_norvegicus
ENSHCOG00000006516	zmat4b	94	83.051	ENSRBIG00000031887	ZMAT4	77	83.051	Rhinopithecus_bieti
ENSHCOG00000006516	zmat4b	94	83.051	ENSRROG00000040877	ZMAT4	77	83.051	Rhinopithecus_roxellana
ENSHCOG00000006516	zmat4b	94	83.051	ENSSBOG00000017391	ZMAT4	77	83.051	Saimiri_boliviensis_boliviensis
ENSHCOG00000006516	zmat4b	79	85.859	ENSSFOG00015015440	zmat4b	81	85.859	Scleropages_formosus
ENSHCOG00000006516	zmat4b	94	93.220	ENSSFOG00015013158	zmat4	72	92.105	Scleropages_formosus
ENSHCOG00000006516	zmat4b	94	95.763	ENSSMAG00000017693	zmat4a	52	95.763	Scophthalmus_maximus
ENSHCOG00000006516	zmat4b	94	95.763	ENSSDUG00000005878	zmat4a	52	95.763	Seriola_dumerili
ENSHCOG00000006516	zmat4b	92	83.478	ENSSARG00000003679	ZMAT4	50	83.478	Sorex_araneus
ENSHCOG00000006516	zmat4b	92	83.478	ENSSSCG00000007010	ZMAT4	50	83.478	Sus_scrofa
ENSHCOG00000006516	zmat4b	90	85.841	ENSTGUG00000005159	ZMAT4	76	85.841	Taeniopygia_guttata
ENSHCOG00000006516	zmat4b	94	81.356	ENSTNIG00000018863	zmat4b	52	81.356	Tetraodon_nigroviridis
ENSHCOG00000006516	zmat4b	92	61.739	ENSTBEG00000016172	ZMAT4	50	61.739	Tupaia_belangeri
ENSHCOG00000006516	zmat4b	92	84.348	ENSTTRG00000009606	ZMAT4	50	84.348	Tursiops_truncatus
ENSHCOG00000006516	zmat4b	92	83.478	ENSUMAG00000025578	ZMAT4	51	83.478	Ursus_maritimus
ENSHCOG00000006516	zmat4b	92	66.957	ENSVPAG00000009783	ZMAT4	50	66.957	Vicugna_pacos
ENSHCOG00000006516	zmat4b	92	83.478	ENSVVUG00000020407	ZMAT4	51	83.478	Vulpes_vulpes
ENSHCOG00000006516	zmat4b	96	68.800	ENSXCOG00000015061	zmat4b	89	68.800	Xiphophorus_couchianus
ENSHCOG00000006516	zmat4b	94	43.089	ENSXCOG00000010189	-	53	43.089	Xiphophorus_couchianus