EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000006550 (Gene tree)
Gene ID
109512521
Gene Symbol
-
Alias
-
Full Name
RAB6A%2C member RAS oncogene family
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
9562 bases
Position
chrKV879821.1:414542-424103
Accession
109512521
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000020459MMR_HSR1PF01926.234.6e-0511
ENSHCOP00000020440MMR_HSR1PF01926.234.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000006176-627XM_019864336ENSHCOP00000020459208 (aa)XP_019719895UPI00094EA479
ENSHCOT00000006166-2259XM_019864335ENSHCOP00000020440208 (aa)XP_019719894UPI00094E200E
Gene Model
Click here to download ENSHCOG00000006550's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006550's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000006550-6737.857ENSHCOG00000013919rab237438.158
ENSHCOG00000006550-9330.288ENSHCOG00000019709rasl11a8330.288
ENSHCOG00000006550-9438.500ENSHCOG00000019468rab1ba9638.500
ENSHCOG00000006550-9441.206ENSHCOG00000017123-9241.206
ENSHCOG00000006550-7639.752ENSHCOG00000020527rab34a6139.752
ENSHCOG00000006550-9533.005ENSHCOG00000005802RAB9A9333.333
ENSHCOG00000006550-9539.614ENSHCOG00000004726rab33a8639.614
ENSHCOG00000006550-7940.244ENSHCOG00000006538si:dkey-16l2.167740.244
ENSHCOG00000006550-7831.515ENSHCOG00000009757ran7431.515
ENSHCOG00000006550-10087.500ENSHCOG00000013130rab6bb10087.500
ENSHCOG00000006550-7541.509ENSHCOG00000019732-7541.509
ENSHCOG00000006550-9333.005ENSHCOG00000000232rab11al9433.005
ENSHCOG00000006550-7644.304ENSHCOG00000007440rab138744.304
ENSHCOG00000006550-8740.331ENSHCOG00000014428rab2a9338.725
ENSHCOG00000006550-7640.000ENSHCOG00000012376rab126640.000
ENSHCOG00000006550-7532.911ENSHCOG00000011080kras8332.911
ENSHCOG00000006550-7538.994ENSHCOG00000003981RAB39B7538.994
ENSHCOG00000006550-9338.000ENSHCOG00000010023-9638.000
ENSHCOG00000006550-9733.663ENSHCOG00000007187rab25b8633.663
ENSHCOG00000006550-7542.038ENSHCOG00000017086RAB157342.038
ENSHCOG00000006550-9338.462ENSHCOG00000001137rab1ab9638.462
ENSHCOG00000006550-8040.936ENSHCOG00000002217rab18b8340.936
ENSHCOG00000006550-7244.516ENSHCOG00000012834-6644.516
ENSHCOG00000006550-9435.000ENSHCOG00000004225-9635.000
ENSHCOG00000006550-9730.952ENSHCOG00000002043rras29630.952
ENSHCOG00000006550-7537.580ENSHCOG00000002423rab11bb7237.580
ENSHCOG00000006550-9532.353ENSHCOG00000000954-9432.353
ENSHCOG00000006550-9436.893ENSHCOG00000013180-9536.893
ENSHCOG00000006550-8141.071ENSHCOG00000001145rab22a8741.071
ENSHCOG00000006550-7936.364ENSHCOG00000013807rheb8936.364
ENSHCOG00000006550-9435.500ENSHCOG00000016322RAB7A9635.500
ENSHCOG00000006550-8034.637ENSHCOG00000005024rab9b8734.637
ENSHCOG00000006550-9437.255ENSHCOG00000019224rab149537.255
ENSHCOG00000006550-8330.508ENSHCOG00000002948dnajc276430.508
ENSHCOG00000006550-9336.842ENSHCOG00000003569rab33ba8036.842
ENSHCOG00000006550-8431.818ENSHCOG00000018456si:ch73-116o1.28431.818
ENSHCOG00000006550-9230.457ENSHCOG00000015161-9330.457
ENSHCOG00000006550-8044.910ENSHCOG00000004662rab5c7544.910
ENSHCOG00000006550-8045.783ENSHCOG00000020238-7645.783
ENSHCOG00000006550-10085.096ENSHCOG00000014711rab6ba10085.096
ENSHCOG00000006550-9331.841ENSHCOG00000004086rab9a9631.841
ENSHCOG00000006550-7242.763ENSHCOG00000009133zgc:1015596442.763
ENSHCOG00000006550-9034.043ENSHCOG00000013095rab25a8934.043
ENSHCOG00000006550-7640.491ENSHCOG00000015692si:dkey-34d22.57540.491
ENSHCOG00000006550-7536.306ENSHCOG00000005652rab11a7336.306
ENSHCOG00000006550-10087.204ENSHCOG00000004404rab4110087.204
ENSHCOG00000006550-6639.130ENSHCOG00000010707rab307439.130
ENSHCOG00000006550-7734.356ENSHCOG00000003667rhebl18834.356
ENSHCOG00000006550-7536.943ENSHCOG00000000985-7736.943
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000006550-10095.673ENSG00000175582RAB6A10097.674Homo_sapiens
ENSHCOG00000006550-9989.756ENSAPOG00000005731rab6a10087.204Acanthochromis_polyacanthus
ENSHCOG00000006550-10095.192ENSAMEG00000017285RAB6A8295.192Ailuropoda_melanoleuca
ENSHCOG00000006550-10096.635ENSACIG00000014605rab6a10096.635Amphilophus_citrinellus
ENSHCOG00000006550-10096.154ENSAOCG00000012277-10096.154Amphiprion_ocellaris
ENSHCOG00000006550-10097.596ENSATEG00000012459-10097.596Anabas_testudineus
ENSHCOG00000006550-9988.780ENSATEG00000015992rab4110087.204Anabas_testudineus
ENSHCOG00000006550-9890.148ENSACAG00000015304-9589.756Anolis_carolinensis
ENSHCOG00000006550-10095.192ENSANAG00000036364RAB6A10095.192Aotus_nancymaae
ENSHCOG00000006550-9988.780ENSACLG00000019423rab4110087.204Astatotilapia_calliptera
ENSHCOG00000006550-10078.673ENSAMXG00000033216rab4110078.673Astyanax_mexicanus
ENSHCOG00000006550-10094.712ENSAMXG00000032547rab6a10094.712Astyanax_mexicanus
ENSHCOG00000006550-10095.192ENSBTAG00000000025RAB6A10095.192Bos_taurus
ENSHCOG00000006550-9876.699WBGene00004269rab-6.19976.699Caenorhabditis_elegans
ENSHCOG00000006550-10095.192ENSCJAG00000039039RAB6A10095.192Callithrix_jacchus
ENSHCOG00000006550-10094.712ENSCAFG00000028870RAB6A10094.712Canis_familiaris
ENSHCOG00000006550-10093.750ENSCAFG00020002206RAB6A10093.750Canis_lupus_dingo
ENSHCOG00000006550-10095.192ENSCHIG00000023957RAB6A10095.192Capra_hircus
ENSHCOG00000006550-10094.231ENSTSYG00000013951RAB6A10094.231Carlito_syrichta
ENSHCOG00000006550-10095.192ENSCATG00000012428RAB6A10095.192Cercocebus_atys
ENSHCOG00000006550-10094.712ENSCLAG00000015536RAB6A10094.712Chinchilla_lanigera
ENSHCOG00000006550-10093.750ENSCSAG00000004062RAB6A10093.750Chlorocebus_sabaeus
ENSHCOG00000006550-10083.654ENSCHOG00000000992RAB6A10083.654Choloepus_hoffmanni
ENSHCOG00000006550-10094.712ENSCPBG00000000041RAB6A10094.712Chrysemys_picta_bellii
ENSHCOG00000006550-9984.135ENSCING00000002960-9984.135Ciona_intestinalis
ENSHCOG00000006550-9984.135ENSCSAVG00000009128-9984.135Ciona_savignyi
ENSHCOG00000006550-10095.192ENSCANG00000029094RAB6A10095.192Colobus_angolensis_palliatus
ENSHCOG00000006550-10095.192ENSCGRG00001018153Rab6a10095.192Cricetulus_griseus_chok1gshd
ENSHCOG00000006550-9988.780ENSCSEG00000004941rab4110087.678Cynoglossus_semilaevis
ENSHCOG00000006550-10097.115ENSCVAG00000022249rab6a10097.115Cyprinodon_variegatus
ENSHCOG00000006550-10086.730ENSCVAG00000001618rab4110086.730Cyprinodon_variegatus
ENSHCOG00000006550-10096.154ENSDARG00000103714rab6a10096.154Danio_rerio
ENSHCOG00000006550-9989.268ENSDARG00000029885rab4110086.730Danio_rerio
ENSHCOG00000006550-10095.673ENSDNOG00000042746RAB6A10095.673Dasypus_novemcinctus
ENSHCOG00000006550-10094.712ENSDORG00000027784Rab6a10094.712Dipodomys_ordii
ENSHCOG00000006550-9986.957FBgn0015797Rab69986.957Drosophila_melanogaster
ENSHCOG00000006550-10069.231ENSETEG00000009412-10069.231Echinops_telfairi
ENSHCOG00000006550-10093.750ENSEASG00005017944RAB6A10093.750Equus_asinus_asinus
ENSHCOG00000006550-10095.192ENSECAG00000022694-10095.192Equus_caballus
ENSHCOG00000006550-10095.673ENSELUG00000008876rab6a10095.673Esox_lucius
ENSHCOG00000006550-10095.192ENSFCAG00000023834RAB6A10095.192Felis_catus
ENSHCOG00000006550-10095.673ENSFALG00000008011RAB6A10095.673Ficedula_albicollis
ENSHCOG00000006550-10094.712ENSFDAG00000010948-10094.712Fukomys_damarensis
ENSHCOG00000006550-10087.204ENSGMOG00000004095rab4110087.204Gadus_morhua
ENSHCOG00000006550-10095.673ENSGALG00000017320RAB6A10095.673Gallus_gallus
ENSHCOG00000006550-9989.806ENSGALG00000026278-9889.806Gallus_gallus
ENSHCOG00000006550-10097.596ENSGAFG00000006356rab6a10097.596Gambusia_affinis
ENSHCOG00000006550-9987.805ENSGAFG00000019872rab4110086.256Gambusia_affinis
ENSHCOG00000006550-9988.780ENSGACG00000017153rab4110087.204Gasterosteus_aculeatus
ENSHCOG00000006550-10097.596ENSGACG00000020356rab6a10097.596Gasterosteus_aculeatus
ENSHCOG00000006550-10096.154ENSGAGG00000021701RAB6A10096.154Gopherus_agassizii
ENSHCOG00000006550-10095.673ENSGGOG00000010610RAB6A10095.673Gorilla_gorilla
ENSHCOG00000006550-10097.115ENSHBUG00000000890rab6a10097.115Haplochromis_burtoni
ENSHCOG00000006550-10094.712ENSHGLG00000008829-10094.712Heterocephalus_glaber_female
ENSHCOG00000006550-10093.750ENSHGLG00100014550-10093.750Heterocephalus_glaber_male
ENSHCOG00000006550-10092.788ENSIPUG00000021740rab6a10092.788Ictalurus_punctatus
ENSHCOG00000006550-10086.730ENSIPUG00000019382rab4110086.730Ictalurus_punctatus
ENSHCOG00000006550-10095.192ENSSTOG00000023497RAB6A10095.192Ictidomys_tridecemlineatus
ENSHCOG00000006550-8099.398ENSKMAG00000013146-8699.398Kryptolebias_marmoratus
ENSHCOG00000006550-10095.192ENSLBEG00000003748rab6a10095.192Labrus_bergylta
ENSHCOG00000006550-9989.756ENSLACG00000013980rab419789.756Latimeria_chalumnae
ENSHCOG00000006550-10094.712ENSLACG00000005168RAB6A10094.712Latimeria_chalumnae
ENSHCOG00000006550-10086.667ENSLOCG00000015191rab419986.667Lepisosteus_oculatus
ENSHCOG00000006550-10095.192ENSMFAG00000041027RAB6A10095.192Macaca_fascicularis
ENSHCOG00000006550-10095.192ENSMNEG00000029216RAB6A10095.192Macaca_nemestrina
ENSHCOG00000006550-10095.192ENSMLEG00000038771RAB6A10095.192Mandrillus_leucophaeus
ENSHCOG00000006550-10097.115ENSMAMG00000012488rab6a10097.115Mastacembelus_armatus
ENSHCOG00000006550-10086.256ENSMAMG00000020859rab4110086.256Mastacembelus_armatus
ENSHCOG00000006550-10097.115ENSMZEG00005023181rab6a10097.115Maylandia_zebra
ENSHCOG00000006550-10095.192ENSMICG00000031565RAB6A10095.192Microcebus_murinus
ENSHCOG00000006550-10095.192ENSMOCG00000014387Rab6a10095.192Microtus_ochrogaster
ENSHCOG00000006550-10097.115ENSMMOG00000016209rab6a10097.115Mola_mola
ENSHCOG00000006550-9288.205ENSMMOG00000001992rab418988.205Mola_mola
ENSHCOG00000006550-10094.231ENSMODG00000007600RAB6A10094.231Monodelphis_domestica
ENSHCOG00000006550-9989.756ENSMALG00000010549rab4110087.204Monopterus_albus
ENSHCOG00000006550-10096.635ENSMALG00000020364-10096.635Monopterus_albus
ENSHCOG00000006550-10094.712MGP_CAROLIEiJ_G0030051Rab6a10094.712Mus_caroli
ENSHCOG00000006550-10094.712ENSMUSG00000030704Rab6a10094.712Mus_musculus
ENSHCOG00000006550-10093.269MGP_PahariEiJ_G0013273Rab6a10093.269Mus_pahari
ENSHCOG00000006550-10094.712MGP_SPRETEiJ_G0031162Rab6a10094.712Mus_spretus
ENSHCOG00000006550-10093.750ENSMPUG00000009724RAB6A10093.750Mustela_putorius_furo
ENSHCOG00000006550-10093.269ENSNGAG00000014566Rab6a10093.269Nannospalax_galili
ENSHCOG00000006550-10097.115ENSNBRG00000016716rab6a10097.115Neolamprologus_brichardi
ENSHCOG00000006550-9987.317ENSNBRG00000022702rab419787.317Neolamprologus_brichardi
ENSHCOG00000006550-10095.192ENSNLEG00000017098RAB6A10095.192Nomascus_leucogenys
ENSHCOG00000006550-10094.231ENSMEUG00000010026RAB6A10094.231Notamacropus_eugenii
ENSHCOG00000006550-9196.825ENSOPRG00000010355RAB6A10096.825Ochotona_princeps
ENSHCOG00000006550-10094.712ENSODEG00000005942RAB6A10094.712Octodon_degus
ENSHCOG00000006550-10097.115ENSONIG00000004394rab6a10097.115Oreochromis_niloticus
ENSHCOG00000006550-10095.192ENSOCUG00000009297RAB6A10095.192Oryctolagus_cuniculus
ENSHCOG00000006550-10096.635ENSORLG00000026197rab6a10096.635Oryzias_latipes
ENSHCOG00000006550-10084.651ENSORLG00000000937-10084.651Oryzias_latipes
ENSHCOG00000006550-10086.256ENSORLG00020000604rab4110086.256Oryzias_latipes_hni
ENSHCOG00000006550-10096.635ENSORLG00020001816rab6a10096.635Oryzias_latipes_hni
ENSHCOG00000006550-10096.635ENSORLG00015006162rab6a10096.635Oryzias_latipes_hsok
ENSHCOG00000006550-10096.635ENSOMEG00000004379-10096.635Oryzias_melastigma
ENSHCOG00000006550-10095.192ENSOGAG00000027043RAB6A10095.192Otolemur_garnettii
ENSHCOG00000006550-10093.750ENSOARG00000007994RAB6A10093.750Ovis_aries
ENSHCOG00000006550-10095.673ENSPPAG00000011436RAB6A10095.673Pan_paniscus
ENSHCOG00000006550-10095.192ENSPPRG00000009543RAB6A10095.192Panthera_pardus
ENSHCOG00000006550-10095.673ENSPTRG00000044137RAB6A10095.673Pan_troglodytes
ENSHCOG00000006550-10095.192ENSPANG00000014356RAB6A10095.192Papio_anubis
ENSHCOG00000006550-9988.293ENSPKIG00000018584rab419788.293Paramormyrops_kingsleyae
ENSHCOG00000006550-10096.635ENSPMGG00000010067-10096.635Periophthalmus_magnuspinnatus
ENSHCOG00000006550-10097.596ENSPFOG00000019509rab6a10097.596Poecilia_formosa
ENSHCOG00000006550-9988.780ENSPLAG00000000376rab419788.780Poecilia_latipinna
ENSHCOG00000006550-10097.596ENSPLAG00000019570rab6a10097.596Poecilia_latipinna
ENSHCOG00000006550-10097.596ENSPMEG00000003369rab6a10097.596Poecilia_mexicana
ENSHCOG00000006550-9988.780ENSPMEG00000014170rab4110087.204Poecilia_mexicana
ENSHCOG00000006550-10097.596ENSPREG00000021505rab6a10097.596Poecilia_reticulata
ENSHCOG00000006550-10094.231ENSPPYG00000003663RAB6A10094.231Pongo_abelii
ENSHCOG00000006550-9095.187ENSPCAG00000006752RAB6A10095.187Procavia_capensis
ENSHCOG00000006550-10095.192ENSPCOG00000021991RAB6A10095.192Propithecus_coquereli
ENSHCOG00000006550-10093.750ENSPVAG00000017342RAB6A10093.750Pteropus_vampyrus
ENSHCOG00000006550-10087.204ENSPNYG00000013288rab4110087.204Pundamilia_nyererei
ENSHCOG00000006550-10097.115ENSPNYG00000020556rab6a10097.115Pundamilia_nyererei
ENSHCOG00000006550-9990.732ENSPNAG00000021737rab419790.732Pygocentrus_nattereri
ENSHCOG00000006550-10094.712ENSRNOG00000018176Rab6a10094.712Rattus_norvegicus
ENSHCOG00000006550-10095.192ENSRBIG00000030390RAB6A10095.192Rhinopithecus_bieti
ENSHCOG00000006550-10095.192ENSRROG00000042103RAB6A10095.192Rhinopithecus_roxellana
ENSHCOG00000006550-10079.327ENSSBOG00000028389RAB6A10079.327Saimiri_boliviensis_boliviensis
ENSHCOG00000006550-10095.673ENSSFOG00015002077rab6a10095.673Scleropages_formosus
ENSHCOG00000006550-9889.655ENSSFOG00015004941rab419589.268Scleropages_formosus
ENSHCOG00000006550-10097.115ENSSMAG00000017205-10097.115Scophthalmus_maximus
ENSHCOG00000006550-9988.293ENSSMAG00000015774rab4110087.204Scophthalmus_maximus
ENSHCOG00000006550-10097.115ENSSDUG00000013496-10097.115Seriola_dumerili
ENSHCOG00000006550-10087.204ENSSLDG00000022282rab4110087.204Seriola_lalandi_dorsalis
ENSHCOG00000006550-10097.115ENSSLDG00000015289-10097.115Seriola_lalandi_dorsalis
ENSHCOG00000006550-9989.806ENSSPUG00000001533-9889.806Sphenodon_punctatus
ENSHCOG00000006550-10093.269ENSSPUG00000017301RAB6A10093.269Sphenodon_punctatus
ENSHCOG00000006550-10093.750ENSSPAG00000001067-10093.750Stegastes_partitus
ENSHCOG00000006550-10087.204ENSSPAG00000006001rab4110087.204Stegastes_partitus
ENSHCOG00000006550-10095.192ENSSSCG00000014828RAB6A10095.192Sus_scrofa
ENSHCOG00000006550-10094.231ENSTGUG00000013470RAB6A10094.231Taeniopygia_guttata
ENSHCOG00000006550-10097.596ENSTRUG00000023252rab6a10097.596Takifugu_rubripes
ENSHCOG00000006550-9987.317ENSTRUG00000009223rab419787.317Takifugu_rubripes
ENSHCOG00000006550-10093.269ENSTTRG00000005374RAB6A10093.269Tursiops_truncatus
ENSHCOG00000006550-10088.942ENSUMAG00000010248RAB6A10088.942Ursus_maritimus
ENSHCOG00000006550-10093.750ENSVVUG00000024550RAB6A10093.750Vulpes_vulpes
ENSHCOG00000006550-10075.962ENSXETG00000031363-10075.962Xenopus_tropicalis
ENSHCOG00000006550-9193.651ENSXETG00000023200rab6a10093.651Xenopus_tropicalis
ENSHCOG00000006550-10097.596ENSXCOG00000006259rab6a10097.596Xiphophorus_couchianus
ENSHCOG00000006550-10097.596ENSXMAG00000011903rab6a10097.596Xiphophorus_maculatus

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