EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006612 (Gene tree)
Gene ID: 109522466
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3493 bases
Position: chrKV880150.1:4129700-4133192
Accession: 109522466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005037	PseudoU_synth_2	PF00849.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000006040	-	2860	XM_019881065	ENSHCOP00000005037	389 (aa)	XP_019736624	UPI00094EAD78

Gene Model

Click here to download ENSHCOG00000006612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006612	rpusd4	82	52.322	ENSG00000165526	RPUSD4	86	51.672	Homo_sapiens
ENSHCOG00000006612	rpusd4	99	70.437	ENSAPOG00000011024	rpusd4	98	70.437	Acanthochromis_polyacanthus
ENSHCOG00000006612	rpusd4	83	52.280	ENSAMEG00000000127	-	86	52.280	Ailuropoda_melanoleuca
ENSHCOG00000006612	rpusd4	56	57.732	ENSAMEG00000005953	-	93	57.732	Ailuropoda_melanoleuca
ENSHCOG00000006612	rpusd4	83	71.517	ENSACIG00000003533	rpusd4	95	71.517	Amphilophus_citrinellus
ENSHCOG00000006612	rpusd4	99	70.801	ENSAOCG00000015409	rpusd4	96	70.801	Amphiprion_ocellaris
ENSHCOG00000006612	rpusd4	99	70.543	ENSAPEG00000018935	rpusd4	96	70.543	Amphiprion_percula
ENSHCOG00000006612	rpusd4	99	69.072	ENSATEG00000008059	rpusd4	96	69.072	Anabas_testudineus
ENSHCOG00000006612	rpusd4	72	52.837	ENSAPLG00000013250	RPUSD4	99	51.342	Anas_platyrhynchos
ENSHCOG00000006612	rpusd4	84	50.000	ENSACAG00000000189	RPUSD4	90	50.000	Anolis_carolinensis
ENSHCOG00000006612	rpusd4	83	50.610	ENSANAG00000024050	RPUSD4	87	50.610	Aotus_nancymaae
ENSHCOG00000006612	rpusd4	98	67.358	ENSACLG00000020996	rpusd4	99	67.358	Astatotilapia_calliptera
ENSHCOG00000006612	rpusd4	91	55.096	ENSAMXG00000031479	rpusd4	95	57.227	Astyanax_mexicanus
ENSHCOG00000006612	rpusd4	84	51.506	ENSBTAG00000020900	RPUSD4	86	51.506	Bos_taurus
ENSHCOG00000006612	rpusd4	83	51.220	ENSCJAG00000042850	RPUSD4	81	51.220	Callithrix_jacchus
ENSHCOG00000006612	rpusd4	83	53.191	ENSCAFG00000010488	RPUSD4	86	53.191	Canis_familiaris
ENSHCOG00000006612	rpusd4	83	53.191	ENSCAFG00020010621	RPUSD4	86	53.191	Canis_lupus_dingo
ENSHCOG00000006612	rpusd4	84	50.904	ENSCHIG00000009975	RPUSD4	86	50.904	Capra_hircus
ENSHCOG00000006612	rpusd4	83	51.524	ENSTSYG00000008456	RPUSD4	86	51.524	Carlito_syrichta
ENSHCOG00000006612	rpusd4	63	51.822	ENSCAPG00000006040	RPUSD4	93	51.822	Cavia_aperea
ENSHCOG00000006612	rpusd4	89	50.716	ENSCPOG00000014971	RPUSD4	89	50.716	Cavia_porcellus
ENSHCOG00000006612	rpusd4	83	51.220	ENSCCAG00000027838	RPUSD4	87	51.220	Cebus_capucinus
ENSHCOG00000006612	rpusd4	83	51.064	ENSCATG00000041570	RPUSD4	86	51.064	Cercocebus_atys
ENSHCOG00000006612	rpusd4	84	52.853	ENSCLAG00000016553	RPUSD4	87	52.853	Chinchilla_lanigera
ENSHCOG00000006612	rpusd4	83	51.672	ENSCSAG00000002274	RPUSD4	86	51.672	Chlorocebus_sabaeus
ENSHCOG00000006612	rpusd4	70	53.069	ENSCHOG00000010249	RPUSD4	96	53.069	Choloepus_hoffmanni
ENSHCOG00000006612	rpusd4	74	54.671	ENSCPBG00000011175	RPUSD4	99	54.671	Chrysemys_picta_bellii
ENSHCOG00000006612	rpusd4	85	50.882	ENSCANG00000039684	RPUSD4	89	50.882	Colobus_angolensis_palliatus
ENSHCOG00000006612	rpusd4	83	51.524	ENSCGRG00001024141	Rpusd4	86	51.524	Cricetulus_griseus_chok1gshd
ENSHCOG00000006612	rpusd4	83	51.524	ENSCGRG00000014415	Rpusd4	86	51.524	Cricetulus_griseus_crigri
ENSHCOG00000006612	rpusd4	88	70.262	ENSCVAG00000000392	rpusd4	98	70.262	Cyprinodon_variegatus
ENSHCOG00000006612	rpusd4	86	70.920	ENSCVAG00000008761	rpusd4	99	65.217	Cyprinodon_variegatus
ENSHCOG00000006612	rpusd4	83	57.187	ENSDARG00000012674	rpusd4	91	57.187	Danio_rerio
ENSHCOG00000006612	rpusd4	83	50.610	ENSDNOG00000020026	RPUSD4	86	50.610	Dasypus_novemcinctus
ENSHCOG00000006612	rpusd4	83	50.305	ENSDORG00000016717	Rpusd4	86	50.305	Dipodomys_ordii
ENSHCOG00000006612	rpusd4	92	48.626	ENSETEG00000013953	RPUSD4	94	48.760	Echinops_telfairi
ENSHCOG00000006612	rpusd4	83	50.915	ENSEASG00005022982	RPUSD4	86	50.915	Equus_asinus_asinus
ENSHCOG00000006612	rpusd4	83	50.915	ENSECAG00000000557	RPUSD4	86	50.915	Equus_caballus
ENSHCOG00000006612	rpusd4	66	56.831	ENSEEUG00000014036	RPUSD4	68	56.831	Erinaceus_europaeus
ENSHCOG00000006612	rpusd4	93	61.230	ENSELUG00000008075	rpusd4	97	61.230	Esox_lucius
ENSHCOG00000006612	rpusd4	83	51.064	ENSFCAG00000029789	RPUSD4	86	51.064	Felis_catus
ENSHCOG00000006612	rpusd4	83	48.930	ENSFALG00000005171	RPUSD4	96	48.930	Ficedula_albicollis
ENSHCOG00000006612	rpusd4	84	51.818	ENSFDAG00000014307	RPUSD4	87	51.818	Fukomys_damarensis
ENSHCOG00000006612	rpusd4	96	69.251	ENSFHEG00000004329	rpusd4	97	69.251	Fundulus_heteroclitus
ENSHCOG00000006612	rpusd4	83	64.000	ENSGMOG00000017726	rpusd4	99	63.253	Gadus_morhua
ENSHCOG00000006612	rpusd4	72	54.035	ENSGALG00000024326	RPUSD4	95	48.696	Gallus_gallus
ENSHCOG00000006612	rpusd4	99	64.541	ENSGAFG00000021559	rpusd4	99	64.541	Gambusia_affinis
ENSHCOG00000006612	rpusd4	86	70.536	ENSGACG00000001657	rpusd4	100	70.238	Gasterosteus_aculeatus
ENSHCOG00000006612	rpusd4	84	51.515	ENSGAGG00000000132	RPUSD4	91	51.515	Gopherus_agassizii
ENSHCOG00000006612	rpusd4	82	52.632	ENSGGOG00000016494	RPUSD4	86	51.976	Gorilla_gorilla
ENSHCOG00000006612	rpusd4	98	67.358	ENSHBUG00000022838	rpusd4	99	67.358	Haplochromis_burtoni
ENSHCOG00000006612	rpusd4	84	51.515	ENSHGLG00000002285	RPUSD4	86	51.515	Heterocephalus_glaber_female
ENSHCOG00000006612	rpusd4	84	51.515	ENSHGLG00100006385	RPUSD4	86	51.515	Heterocephalus_glaber_male
ENSHCOG00000006612	rpusd4	84	57.530	ENSIPUG00000023879	rusd4	85	57.530	Ictalurus_punctatus
ENSHCOG00000006612	rpusd4	83	52.599	ENSSTOG00000025280	RPUSD4	89	52.599	Ictidomys_tridecemlineatus
ENSHCOG00000006612	rpusd4	84	52.695	ENSJJAG00000018673	Rpusd4	89	52.695	Jaculus_jaculus
ENSHCOG00000006612	rpusd4	99	66.327	ENSKMAG00000021805	rpusd4	99	66.327	Kryptolebias_marmoratus
ENSHCOG00000006612	rpusd4	85	73.494	ENSLBEG00000020394	rpusd4	93	73.494	Labrus_bergylta
ENSHCOG00000006612	rpusd4	83	53.704	ENSLACG00000011028	RPUSD4	87	51.594	Latimeria_chalumnae
ENSHCOG00000006612	rpusd4	84	45.181	ENSLOCG00000003124	rpusd4	88	45.181	Lepisosteus_oculatus
ENSHCOG00000006612	rpusd4	84	52.711	ENSLAFG00000005211	RPUSD4	100	45.424	Loxodonta_africana
ENSHCOG00000006612	rpusd4	83	51.368	ENSMFAG00000039513	RPUSD4	86	51.368	Macaca_fascicularis
ENSHCOG00000006612	rpusd4	83	51.064	ENSMMUG00000007933	RPUSD4	86	51.064	Macaca_mulatta
ENSHCOG00000006612	rpusd4	83	51.368	ENSMNEG00000027414	RPUSD4	86	51.368	Macaca_nemestrina
ENSHCOG00000006612	rpusd4	84	51.198	ENSMLEG00000042461	RPUSD4	87	51.198	Mandrillus_leucophaeus
ENSHCOG00000006612	rpusd4	99	67.692	ENSMAMG00000023839	rpusd4	99	67.692	Mastacembelus_armatus
ENSHCOG00000006612	rpusd4	98	67.358	ENSMZEG00005011999	rpusd4	99	67.358	Maylandia_zebra
ENSHCOG00000006612	rpusd4	72	52.650	ENSMGAG00000000840	RPUSD4	99	48.930	Meleagris_gallopavo
ENSHCOG00000006612	rpusd4	83	51.672	ENSMAUG00000010280	Rpusd4	86	51.672	Mesocricetus_auratus
ENSHCOG00000006612	rpusd4	84	51.360	ENSMICG00000015979	RPUSD4	90	53.289	Microcebus_murinus
ENSHCOG00000006612	rpusd4	83	50.000	ENSMOCG00000000661	Rpusd4	86	50.000	Microtus_ochrogaster
ENSHCOG00000006612	rpusd4	80	75.241	ENSMMOG00000021731	rpusd4	93	75.241	Mola_mola
ENSHCOG00000006612	rpusd4	79	53.035	ENSMODG00000004521	RPUSD4	79	53.035	Monodelphis_domestica
ENSHCOG00000006612	rpusd4	80	73.397	ENSMALG00000005839	rpusd4	96	73.016	Monopterus_albus
ENSHCOG00000006612	rpusd4	83	50.915	MGP_CAROLIEiJ_G0031954	Rpusd4	86	50.915	Mus_caroli
ENSHCOG00000006612	rpusd4	83	50.915	ENSMUSG00000032044	Rpusd4	86	50.915	Mus_musculus
ENSHCOG00000006612	rpusd4	87	49.275	MGP_PahariEiJ_G0014819	Rpusd4	90	49.275	Mus_pahari
ENSHCOG00000006612	rpusd4	83	50.915	MGP_SPRETEiJ_G0033078	Rpusd4	86	50.915	Mus_spretus
ENSHCOG00000006612	rpusd4	83	52.888	ENSMPUG00000006608	RPUSD4	86	52.888	Mustela_putorius_furo
ENSHCOG00000006612	rpusd4	66	51.550	ENSMLUG00000029348	-	99	51.550	Myotis_lucifugus
ENSHCOG00000006612	rpusd4	81	52.174	ENSMLUG00000017328	-	84	52.174	Myotis_lucifugus
ENSHCOG00000006612	rpusd4	83	54.573	ENSNGAG00000020847	Rpusd4	86	54.573	Nannospalax_galili
ENSHCOG00000006612	rpusd4	83	73.375	ENSNBRG00000005207	rpusd4	94	73.375	Neolamprologus_brichardi
ENSHCOG00000006612	rpusd4	83	50.456	ENSNLEG00000007465	RPUSD4	86	50.456	Nomascus_leucogenys
ENSHCOG00000006612	rpusd4	84	51.515	ENSMEUG00000004370	RPUSD4	88	51.515	Notamacropus_eugenii
ENSHCOG00000006612	rpusd4	84	51.515	ENSODEG00000004577	RPUSD4	86	51.515	Octodon_degus
ENSHCOG00000006612	rpusd4	98	67.876	ENSONIG00000018879	rpusd4	99	67.876	Oreochromis_niloticus
ENSHCOG00000006612	rpusd4	75	51.007	ENSOANG00000007247	RPUSD4	95	50.831	Ornithorhynchus_anatinus
ENSHCOG00000006612	rpusd4	89	50.286	ENSOCUG00000017039	RPUSD4	89	50.286	Oryctolagus_cuniculus
ENSHCOG00000006612	rpusd4	87	68.343	ENSORLG00000002750	rpusd4	93	68.343	Oryzias_latipes
ENSHCOG00000006612	rpusd4	90	65.714	ENSORLG00020002044	rpusd4	88	65.714	Oryzias_latipes_hni
ENSHCOG00000006612	rpusd4	90	65.812	ENSORLG00015020034	rpusd4	88	65.812	Oryzias_latipes_hsok
ENSHCOG00000006612	rpusd4	90	69.429	ENSOMEG00000004861	rpusd4	87	69.429	Oryzias_melastigma
ENSHCOG00000006612	rpusd4	82	52.923	ENSOGAG00000008922	RPUSD4	86	52.568	Otolemur_garnettii
ENSHCOG00000006612	rpusd4	84	50.904	ENSOARG00000012238	RPUSD4	86	50.904	Ovis_aries
ENSHCOG00000006612	rpusd4	82	52.322	ENSPPAG00000042883	RPUSD4	80	51.672	Pan_paniscus
ENSHCOG00000006612	rpusd4	83	51.064	ENSPPRG00000003081	RPUSD4	86	51.064	Panthera_pardus
ENSHCOG00000006612	rpusd4	83	51.064	ENSPTIG00000012059	RPUSD4	88	51.125	Panthera_tigris_altaica
ENSHCOG00000006612	rpusd4	82	52.322	ENSPTRG00000004454	RPUSD4	86	51.672	Pan_troglodytes
ENSHCOG00000006612	rpusd4	83	51.368	ENSPANG00000015040	RPUSD4	86	51.368	Papio_anubis
ENSHCOG00000006612	rpusd4	87	58.187	ENSPKIG00000023986	rpusd4	87	58.187	Paramormyrops_kingsleyae
ENSHCOG00000006612	rpusd4	76	54.333	ENSPSIG00000014268	RPUSD4	94	54.333	Pelodiscus_sinensis
ENSHCOG00000006612	rpusd4	86	67.463	ENSPMGG00000002806	rpusd4	94	66.366	Periophthalmus_magnuspinnatus
ENSHCOG00000006612	rpusd4	83	44.817	ENSPEMG00000000278	Rpusd4	85	44.817	Peromyscus_maniculatus_bairdii
ENSHCOG00000006612	rpusd4	80	40.816	ENSPMAG00000008183	rpusd4	99	40.816	Petromyzon_marinus
ENSHCOG00000006612	rpusd4	84	53.333	ENSPCIG00000010212	RPUSD4	89	53.333	Phascolarctos_cinereus
ENSHCOG00000006612	rpusd4	94	66.400	ENSPFOG00000019030	rpusd4	99	66.400	Poecilia_formosa
ENSHCOG00000006612	rpusd4	99	65.561	ENSPLAG00000016848	rpusd4	99	65.561	Poecilia_latipinna
ENSHCOG00000006612	rpusd4	99	64.541	ENSPMEG00000017534	rpusd4	99	64.541	Poecilia_mexicana
ENSHCOG00000006612	rpusd4	97	65.274	ENSPREG00000005689	rpusd4	98	65.274	Poecilia_reticulata
ENSHCOG00000006612	rpusd4	83	50.915	ENSPPYG00000004043	RPUSD4	86	50.915	Pongo_abelii
ENSHCOG00000006612	rpusd4	66	53.552	ENSPCAG00000000753	RPUSD4	77	53.552	Procavia_capensis
ENSHCOG00000006612	rpusd4	84	49.394	ENSPCOG00000020694	RPUSD4	87	49.394	Propithecus_coquereli
ENSHCOG00000006612	rpusd4	84	51.051	ENSPVAG00000000988	RPUSD4	88	51.051	Pteropus_vampyrus
ENSHCOG00000006612	rpusd4	98	67.098	ENSPNYG00000009652	rpusd4	99	67.098	Pundamilia_nyererei
ENSHCOG00000006612	rpusd4	83	59.568	ENSPNAG00000012264	rpusd4	85	59.568	Pygocentrus_nattereri
ENSHCOG00000006612	rpusd4	83	51.829	ENSRNOG00000011567	Rpusd4	86	51.829	Rattus_norvegicus
ENSHCOG00000006612	rpusd4	83	50.765	ENSRBIG00000034842	RPUSD4	86	51.064	Rhinopithecus_bieti
ENSHCOG00000006612	rpusd4	83	50.765	ENSRROG00000039753	RPUSD4	86	51.064	Rhinopithecus_roxellana
ENSHCOG00000006612	rpusd4	83	50.610	ENSSBOG00000030413	RPUSD4	87	50.610	Saimiri_boliviensis_boliviensis
ENSHCOG00000006612	rpusd4	77	54.605	ENSSHAG00000008304	RPUSD4	99	54.605	Sarcophilus_harrisii
ENSHCOG00000006612	rpusd4	83	60.121	ENSSFOG00015006203	rpusd4	89	60.423	Scleropages_formosus
ENSHCOG00000006612	rpusd4	99	68.123	ENSSMAG00000020978	rpusd4	99	68.602	Scophthalmus_maximus
ENSHCOG00000006612	rpusd4	93	71.271	ENSSDUG00000013399	rpusd4	94	71.271	Seriola_dumerili
ENSHCOG00000006612	rpusd4	93	70.994	ENSSLDG00000023507	rpusd4	94	70.994	Seriola_lalandi_dorsalis
ENSHCOG00000006612	rpusd4	86	50.437	ENSSPUG00000001401	RPUSD4	94	50.437	Sphenodon_punctatus
ENSHCOG00000006612	rpusd4	99	66.495	ENSSPAG00000012163	rpusd4	99	66.495	Stegastes_partitus
ENSHCOG00000006612	rpusd4	85	49.405	ENSSSCG00000015233	RPUSD4	88	49.405	Sus_scrofa
ENSHCOG00000006612	rpusd4	76	50.671	ENSTGUG00000000773	RPUSD4	99	50.671	Taeniopygia_guttata
ENSHCOG00000006612	rpusd4	99	64.175	ENSTRUG00000012283	rpusd4	99	64.175	Takifugu_rubripes
ENSHCOG00000006612	rpusd4	99	64.781	ENSTNIG00000014676	rpusd4	99	64.781	Tetraodon_nigroviridis
ENSHCOG00000006612	rpusd4	85	50.298	ENSTTRG00000001555	RPUSD4	88	50.298	Tursiops_truncatus
ENSHCOG00000006612	rpusd4	83	52.599	ENSUMAG00000002219	RPUSD4	85	52.599	Ursus_maritimus
ENSHCOG00000006612	rpusd4	58	47.391	ENSVPAG00000001066	RPUSD4	85	47.391	Vicugna_pacos
ENSHCOG00000006612	rpusd4	83	53.191	ENSVVUG00000020101	RPUSD4	86	53.191	Vulpes_vulpes
ENSHCOG00000006612	rpusd4	99	64.286	ENSXCOG00000004676	rpusd4	99	64.286	Xiphophorus_couchianus
ENSHCOG00000006612	rpusd4	99	64.541	ENSXMAG00000023351	rpusd4	99	64.541	Xiphophorus_maculatus