EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006699 (Gene tree)
Gene ID: 109529795
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3217 bases
Position: chrKV880383.1:450719-453935
Accession: 109529795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005099	NOB1_Zn_bind	PF08772.11	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005935	-	1542	XM_019893246	ENSHCOP00000005099	421 (aa)	XP_019748805	UPI00094E4CBE

Gene Model

Click here to download ENSHCOG00000006699's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006699	nob1	99	60.287	ENSG00000141101	NOB1	94	69.355	Homo_sapiens
ENSHCOG00000006699	nob1	85	64.706	ENSAPOG00000008241	nob1	93	63.361	Acanthochromis_polyacanthus
ENSHCOG00000006699	nob1	99	61.244	ENSAMEG00000006706	NOB1	98	61.005	Ailuropoda_melanoleuca
ENSHCOG00000006699	nob1	100	65.035	ENSACIG00000001503	nob1	100	65.501	Amphilophus_citrinellus
ENSHCOG00000006699	nob1	100	64.608	ENSAOCG00000006533	nob1	99	64.133	Amphiprion_ocellaris
ENSHCOG00000006699	nob1	100	65.321	ENSAPEG00000000032	-	99	65.083	Amphiprion_percula
ENSHCOG00000006699	nob1	100	65.321	ENSAPEG00000000029	nob1	99	65.083	Amphiprion_percula
ENSHCOG00000006699	nob1	100	64.133	ENSATEG00000014585	nob1	99	64.133	Anabas_testudineus
ENSHCOG00000006699	nob1	97	61.594	ENSACAG00000003697	NOB1	85	61.005	Anolis_carolinensis
ENSHCOG00000006699	nob1	99	59.375	ENSANAG00000036611	NOB1	99	59.135	Aotus_nancymaae
ENSHCOG00000006699	nob1	100	65.349	ENSACLG00000024897	nob1	99	65.349	Astatotilapia_calliptera
ENSHCOG00000006699	nob1	95	56.674	ENSAMXG00000003642	nob1	99	59.719	Astyanax_mexicanus
ENSHCOG00000006699	nob1	99	60.817	ENSBTAG00000020633	NOB1	99	60.817	Bos_taurus
ENSHCOG00000006699	nob1	71	43.842	WBGene00021843	Y54E10BR.4	96	32.134	Caenorhabditis_elegans
ENSHCOG00000006699	nob1	99	60.577	ENSCJAG00000015230	NOB1	99	60.337	Callithrix_jacchus
ENSHCOG00000006699	nob1	99	60.911	ENSCAFG00000020251	NOB1	99	60.911	Canis_familiaris
ENSHCOG00000006699	nob1	99	60.911	ENSCAFG00020020297	NOB1	99	60.911	Canis_lupus_dingo
ENSHCOG00000006699	nob1	99	61.058	ENSCHIG00000027022	NOB1	99	61.058	Capra_hircus
ENSHCOG00000006699	nob1	98	58.696	ENSTSYG00000003084	NOB1	98	59.135	Carlito_syrichta
ENSHCOG00000006699	nob1	84	56.941	ENSCAPG00000015542	NOB1	99	58.640	Cavia_aperea
ENSHCOG00000006699	nob1	99	58.894	ENSCPOG00000022538	NOB1	99	60.337	Cavia_porcellus
ENSHCOG00000006699	nob1	99	60.671	ENSCCAG00000023773	NOB1	99	59.615	Cebus_capucinus
ENSHCOG00000006699	nob1	99	60.432	ENSCATG00000039487	NOB1	99	60.432	Cercocebus_atys
ENSHCOG00000006699	nob1	84	60.340	ENSCLAG00000005926	NOB1	99	60.057	Chinchilla_lanigera
ENSHCOG00000006699	nob1	99	60.048	ENSCSAG00000004158	NOB1	99	60.048	Chlorocebus_sabaeus
ENSHCOG00000006699	nob1	99	52.448	ENSCHOG00000011047	NOB1	99	51.376	Choloepus_hoffmanni
ENSHCOG00000006699	nob1	99	60.095	ENSCPBG00000027035	NOB1	91	58.907	Chrysemys_picta_bellii
ENSHCOG00000006699	nob1	99	44.787	ENSCING00000023441	-	99	43.810	Ciona_intestinalis
ENSHCOG00000006699	nob1	99	45.694	ENSCSAVG00000009081	-	98	45.694	Ciona_savignyi
ENSHCOG00000006699	nob1	99	60.577	ENSCGRG00001009255	Nob1	93	60.096	Cricetulus_griseus_chok1gshd
ENSHCOG00000006699	nob1	99	60.577	ENSCGRG00000010869	Nob1	99	60.096	Cricetulus_griseus_crigri
ENSHCOG00000006699	nob1	88	60.677	ENSCSEG00000019657	nob1	93	60.677	Cynoglossus_semilaevis
ENSHCOG00000006699	nob1	100	56.920	ENSDARG00000016080	nob1	99	57.366	Danio_rerio
ENSHCOG00000006699	nob1	99	59.286	ENSDNOG00000041643	NOB1	99	57.576	Dasypus_novemcinctus
ENSHCOG00000006699	nob1	99	58.824	ENSDORG00000000483	Nob1	99	59.059	Dipodomys_ordii
ENSHCOG00000006699	nob1	97	36.989	FBgn0030177	CG2972	77	49.275	Drosophila_melanogaster
ENSHCOG00000006699	nob1	60	49.213	ENSETEG00000000011	-	59	48.819	Echinops_telfairi
ENSHCOG00000006699	nob1	99	45.133	ENSEBUG00000004464	nob1	99	45.354	Eptatretus_burgeri
ENSHCOG00000006699	nob1	99	59.330	ENSEASG00005021356	NOB1	83	60.048	Equus_asinus_asinus
ENSHCOG00000006699	nob1	99	59.330	ENSECAG00000023748	NOB1	80	60.048	Equus_caballus
ENSHCOG00000006699	nob1	69	47.405	ENSEEUG00000014384	NOB1	66	47.405	Erinaceus_europaeus
ENSHCOG00000006699	nob1	100	59.551	ENSELUG00000016199	nob1	99	57.718	Esox_lucius
ENSHCOG00000006699	nob1	99	59.569	ENSFCAG00000002958	NOB1	99	59.569	Felis_catus
ENSHCOG00000006699	nob1	99	57.933	ENSFDAG00000009239	NOB1	99	58.019	Fukomys_damarensis
ENSHCOG00000006699	nob1	54	71.616	ENSFHEG00000007657	nob1	52	75.728	Fundulus_heteroclitus
ENSHCOG00000006699	nob1	99	62.530	ENSGMOG00000010638	nob1	99	63.007	Gadus_morhua
ENSHCOG00000006699	nob1	99	54.846	ENSGALG00000000693	NOB1	99	55.792	Gallus_gallus
ENSHCOG00000006699	nob1	100	59.091	ENSGAFG00000006104	nob1	99	59.653	Gambusia_affinis
ENSHCOG00000006699	nob1	99	65.550	ENSGACG00000017552	nob1	99	65.550	Gasterosteus_aculeatus
ENSHCOG00000006699	nob1	99	59.048	ENSGAGG00000003902	NOB1	99	58.195	Gopherus_agassizii
ENSHCOG00000006699	nob1	99	60.526	ENSGGOG00000025456	NOB1	99	60.526	Gorilla_gorilla
ENSHCOG00000006699	nob1	100	66.983	ENSHBUG00000002580	nob1	99	66.983	Haplochromis_burtoni
ENSHCOG00000006699	nob1	99	60.577	ENSHGLG00000014260	NOB1	99	60.337	Heterocephalus_glaber_female
ENSHCOG00000006699	nob1	99	60.577	ENSHGLG00100013978	NOB1	99	60.337	Heterocephalus_glaber_male
ENSHCOG00000006699	nob1	100	53.099	ENSIPUG00000007579	nob1	99	54.412	Ictalurus_punctatus
ENSHCOG00000006699	nob1	99	60.526	ENSSTOG00000001204	NOB1	99	59.716	Ictidomys_tridecemlineatus
ENSHCOG00000006699	nob1	99	58.173	ENSJJAG00000015543	Nob1	99	57.412	Jaculus_jaculus
ENSHCOG00000006699	nob1	100	64.133	ENSKMAG00000018220	nob1	99	64.133	Kryptolebias_marmoratus
ENSHCOG00000006699	nob1	100	63.658	ENSLBEG00000026375	nob1	99	63.658	Labrus_bergylta
ENSHCOG00000006699	nob1	100	57.666	ENSLACG00000006973	NOB1	98	57.466	Latimeria_chalumnae
ENSHCOG00000006699	nob1	100	56.444	ENSLOCG00000001411	nob1	99	56.889	Lepisosteus_oculatus
ENSHCOG00000006699	nob1	99	58.894	ENSLAFG00000008978	NOB1	99	58.894	Loxodonta_africana
ENSHCOG00000006699	nob1	99	60.817	ENSMFAG00000030131	NOB1	99	60.577	Macaca_fascicularis
ENSHCOG00000006699	nob1	99	60.577	ENSMMUG00000006506	NOB1	99	60.577	Macaca_mulatta
ENSHCOG00000006699	nob1	99	60.817	ENSMNEG00000028829	NOB1	99	56.010	Macaca_nemestrina
ENSHCOG00000006699	nob1	99	60.817	ENSMLEG00000032913	NOB1	99	60.817	Mandrillus_leucophaeus
ENSHCOG00000006699	nob1	68	59.609	ENSMZEG00005003827	-	90	61.333	Maylandia_zebra
ENSHCOG00000006699	nob1	100	65.796	ENSMZEG00005028346	nob1	99	65.083	Maylandia_zebra
ENSHCOG00000006699	nob1	62	59.551	ENSMGAG00000008675	NOB1	97	59.848	Meleagris_gallopavo
ENSHCOG00000006699	nob1	99	57.933	ENSMAUG00000013554	Nob1	99	57.933	Mesocricetus_auratus
ENSHCOG00000006699	nob1	99	60.192	ENSMICG00000012123	NOB1	99	60.671	Microcebus_murinus
ENSHCOG00000006699	nob1	99	58.654	ENSMOCG00000010370	Nob1	99	59.620	Microtus_ochrogaster
ENSHCOG00000006699	nob1	100	66.983	ENSMMOG00000002120	nob1	99	66.745	Mola_mola
ENSHCOG00000006699	nob1	99	58.411	ENSMODG00000002677	NOB1	99	59.485	Monodelphis_domestica
ENSHCOG00000006699	nob1	100	63.895	ENSMALG00000014580	nob1	99	63.895	Monopterus_albus
ENSHCOG00000006699	nob1	99	61.058	MGP_CAROLIEiJ_G0031536	Nob1	97	61.058	Mus_caroli
ENSHCOG00000006699	nob1	99	61.151	ENSMUSG00000003848	Nob1	99	61.151	Mus_musculus
ENSHCOG00000006699	nob1	99	61.151	MGP_PahariEiJ_G0023136	Nob1	99	61.151	Mus_pahari
ENSHCOG00000006699	nob1	99	61.391	MGP_SPRETEiJ_G0032654	Nob1	97	61.391	Mus_spretus
ENSHCOG00000006699	nob1	99	61.058	ENSMPUG00000007483	NOB1	90	61.058	Mustela_putorius_furo
ENSHCOG00000006699	nob1	99	59.135	ENSMLUG00000006667	NOB1	99	59.856	Myotis_lucifugus
ENSHCOG00000006699	nob1	99	58.654	ENSNGAG00000008627	Nob1	99	60.337	Nannospalax_galili
ENSHCOG00000006699	nob1	99	59.529	ENSNLEG00000005572	NOB1	99	59.529	Nomascus_leucogenys
ENSHCOG00000006699	nob1	78	59.146	ENSOPRG00000006721	NOB1	99	58.841	Ochotona_princeps
ENSHCOG00000006699	nob1	99	60.096	ENSODEG00000014376	NOB1	99	59.615	Octodon_degus
ENSHCOG00000006699	nob1	99	62.727	ENSONIG00000003319	nob1	99	63.636	Oreochromis_niloticus
ENSHCOG00000006699	nob1	84	59.322	ENSOCUG00000004400	NOB1	99	57.065	Oryctolagus_cuniculus
ENSHCOG00000006699	nob1	100	64.846	ENSORLG00000018862	nob1	99	64.846	Oryzias_latipes
ENSHCOG00000006699	nob1	100	66.271	ENSORLG00020014687	nob1	99	66.351	Oryzias_latipes_hni
ENSHCOG00000006699	nob1	100	64.608	ENSORLG00015012156	nob1	99	64.608	Oryzias_latipes_hsok
ENSHCOG00000006699	nob1	100	60.870	ENSOMEG00000022722	nob1	99	60.870	Oryzias_melastigma
ENSHCOG00000006699	nob1	99	55.529	ENSOGAG00000004590	NOB1	99	53.864	Otolemur_garnettii
ENSHCOG00000006699	nob1	99	60.817	ENSOARG00000003606	NOB1	99	60.817	Ovis_aries
ENSHCOG00000006699	nob1	97	54.523	ENSPPAG00000003317	-	99	54.768	Pan_paniscus
ENSHCOG00000006699	nob1	99	60.048	ENSPPAG00000040257	NOB1	99	60.048	Pan_paniscus
ENSHCOG00000006699	nob1	99	60.577	ENSPPRG00000016949	NOB1	99	60.577	Panthera_pardus
ENSHCOG00000006699	nob1	99	60.577	ENSPTIG00000011234	NOB1	99	60.577	Panthera_tigris_altaica
ENSHCOG00000006699	nob1	99	60.287	ENSPTRG00000008285	NOB1	99	60.287	Pan_troglodytes
ENSHCOG00000006699	nob1	99	60.577	ENSPANG00000015858	NOB1	99	60.577	Papio_anubis
ENSHCOG00000006699	nob1	99	60.325	ENSPKIG00000020293	nob1	99	61.124	Paramormyrops_kingsleyae
ENSHCOG00000006699	nob1	99	57.957	ENSPSIG00000012477	NOB1	99	57.459	Pelodiscus_sinensis
ENSHCOG00000006699	nob1	100	60.095	ENSPMGG00000023476	nob1	99	60.333	Periophthalmus_magnuspinnatus
ENSHCOG00000006699	nob1	99	60.382	ENSPEMG00000010995	Nob1	99	60.382	Peromyscus_maniculatus_bairdii
ENSHCOG00000006699	nob1	84	60.218	ENSPFOG00000000027	nob1	99	62.295	Poecilia_formosa
ENSHCOG00000006699	nob1	63	65.299	ENSPLAG00000011546	nob1	92	66.792	Poecilia_latipinna
ENSHCOG00000006699	nob1	100	61.124	ENSPMEG00000023435	nob1	99	61.374	Poecilia_mexicana
ENSHCOG00000006699	nob1	100	59.307	ENSPREG00000007675	nob1	99	59.091	Poecilia_reticulata
ENSHCOG00000006699	nob1	99	60.817	ENSPPYG00000007509	NOB1	99	60.817	Pongo_abelii
ENSHCOG00000006699	nob1	99	58.234	ENSPCAG00000001527	NOB1	99	58.473	Procavia_capensis
ENSHCOG00000006699	nob1	99	58.413	ENSPCOG00000025515	NOB1	99	59.856	Propithecus_coquereli
ENSHCOG00000006699	nob1	78	41.768	ENSPVAG00000013330	NOB1	78	41.463	Pteropus_vampyrus
ENSHCOG00000006699	nob1	100	64.583	ENSPNYG00000018449	nob1	99	63.889	Pundamilia_nyererei
ENSHCOG00000006699	nob1	100	57.650	ENSPNAG00000004244	nob1	99	60.045	Pygocentrus_nattereri
ENSHCOG00000006699	nob1	99	61.298	ENSRNOG00000021890	Nob1	99	61.538	Rattus_norvegicus
ENSHCOG00000006699	nob1	99	60.337	ENSRBIG00000019599	NOB1	99	60.337	Rhinopithecus_bieti
ENSHCOG00000006699	nob1	99	60.337	ENSRROG00000033419	NOB1	99	60.337	Rhinopithecus_roxellana
ENSHCOG00000006699	nob1	89	56.117	ENSSBOG00000029042	NOB1	93	55.851	Saimiri_boliviensis_boliviensis
ENSHCOG00000006699	nob1	99	61.814	ENSSHAG00000015387	NOB1	99	61.814	Sarcophilus_harrisii
ENSHCOG00000006699	nob1	100	59.637	ENSSFOG00015008503	nob1	99	62.014	Scleropages_formosus
ENSHCOG00000006699	nob1	100	67.376	ENSSMAG00000003064	nob1	99	67.139	Scophthalmus_maximus
ENSHCOG00000006699	nob1	100	66.746	ENSSDUG00000007307	nob1	99	66.746	Seriola_dumerili
ENSHCOG00000006699	nob1	86	67.826	ENSSLDG00000011459	-	95	75.882	Seriola_lalandi_dorsalis
ENSHCOG00000006699	nob1	84	58.217	ENSSPUG00000005621	NOB1	99	55.738	Sphenodon_punctatus
ENSHCOG00000006699	nob1	99	65.155	ENSSPAG00000022362	nob1	99	65.155	Stegastes_partitus
ENSHCOG00000006699	nob1	99	61.058	ENSSSCG00000002753	NOB1	99	58.974	Sus_scrofa
ENSHCOG00000006699	nob1	100	63.864	ENSTRUG00000004780	nob1	99	64.091	Takifugu_rubripes
ENSHCOG00000006699	nob1	100	63.864	ENSTRUG00000023145	nob1	99	64.091	Takifugu_rubripes
ENSHCOG00000006699	nob1	99	67.064	ENSTNIG00000002552	nob1	99	67.064	Tetraodon_nigroviridis
ENSHCOG00000006699	nob1	60	53.360	ENSTBEG00000000690	NOB1	52	53.516	Tupaia_belangeri
ENSHCOG00000006699	nob1	61	62.500	ENSUAMG00000028135	NOB1	99	62.500	Ursus_americanus
ENSHCOG00000006699	nob1	99	61.151	ENSUMAG00000018658	NOB1	94	61.151	Ursus_maritimus
ENSHCOG00000006699	nob1	99	61.151	ENSVVUG00000017271	NOB1	99	61.151	Vulpes_vulpes
ENSHCOG00000006699	nob1	99	57.044	ENSXETG00000017874	nob1	98	57.044	Xenopus_tropicalis
ENSHCOG00000006699	nob1	84	61.690	ENSXCOG00000009734	nob1	99	61.905	Xiphophorus_couchianus
ENSHCOG00000006699	nob1	100	62.061	ENSXMAG00000017371	nob1	99	61.792	Xiphophorus_maculatus