EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006741 (Gene tree)
Gene ID: 109511774
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 54053 bases
Position: chrKV879801.1:941316-995368
Accession: 109511774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020559	ResIII	PF04851.15	3.1e-07	1	1
ENSHCOP00000005113	ResIII	PF04851.15	3.1e-07	1	1
ENSHCOP00000005136	ResIII	PF04851.15	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005883	-	8625	XM_019863068	ENSHCOP00000005136	1498 (aa)	XP_019718627	UPI00094E427A
ENSHCOT00000005913	-	8609	XM_019863070	ENSHCOP00000005113	1467 (aa)	XP_019718629	UPI00094EB391
ENSHCOT00000005891	-	8551	XM_019863071	ENSHCOP00000020559	1457 (aa)	XP_019718630	UPI00094ED3FE

Gene Model

Click here to download ENSHCOG00000006741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006741	-	99	55.629	ENSHCOG00000007601	rad54l2	92	56.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006741	-	90	57.630	ENSG00000164080	RAD54L2	92	59.072	Homo_sapiens
ENSHCOG00000006741	-	100	75.421	ENSAPOG00000024141	-	99	75.538	Acanthochromis_polyacanthus
ENSHCOG00000006741	-	93	55.579	ENSAMEG00000009326	RAD54L2	88	57.556	Ailuropoda_melanoleuca
ENSHCOG00000006741	-	86	61.343	ENSACIG00000018079	rad54l2	91	60.899	Amphilophus_citrinellus
ENSHCOG00000006741	-	91	73.149	ENSACIG00000015932	-	99	72.439	Amphilophus_citrinellus
ENSHCOG00000006741	-	99	75.000	ENSAOCG00000022380	-	99	75.067	Amphiprion_ocellaris
ENSHCOG00000006741	-	99	75.219	ENSATEG00000006641	-	99	75.503	Anabas_testudineus
ENSHCOG00000006741	-	93	59.986	ENSATEG00000009346	rad54l2	95	58.991	Anabas_testudineus
ENSHCOG00000006741	-	92	60.131	ENSAPLG00000002121	RAD54L2	97	58.165	Anas_platyrhynchos
ENSHCOG00000006741	-	80	64.160	ENSACAG00000015883	RAD54L2	93	62.036	Anolis_carolinensis
ENSHCOG00000006741	-	90	57.153	ENSANAG00000025396	RAD54L2	92	55.517	Aotus_nancymaae
ENSHCOG00000006741	-	92	57.798	ENSACLG00000019111	rad54l2	93	58.432	Astatotilapia_calliptera
ENSHCOG00000006741	-	97	74.115	ENSACLG00000018296	-	99	74.398	Astatotilapia_calliptera
ENSHCOG00000006741	-	90	59.453	ENSAMXG00000013807	rad54l2	91	58.930	Astyanax_mexicanus
ENSHCOG00000006741	-	93	55.237	ENSBTAG00000032253	RAD54L2	89	57.504	Bos_taurus
ENSHCOG00000006741	-	90	57.228	ENSCJAG00000005575	RAD54L2	92	57.943	Callithrix_jacchus
ENSHCOG00000006741	-	93	55.439	ENSCAFG00000010120	RAD54L2	88	57.481	Canis_familiaris
ENSHCOG00000006741	-	93	55.439	ENSCAFG00020022320	RAD54L2	88	57.481	Canis_lupus_dingo
ENSHCOG00000006741	-	94	55.798	ENSCHIG00000008830	RAD54L2	92	55.884	Capra_hircus
ENSHCOG00000006741	-	90	57.556	ENSTSYG00000013200	RAD54L2	88	57.704	Carlito_syrichta
ENSHCOG00000006741	-	77	64.483	ENSCAPG00000016465	RAD54L2	80	64.348	Cavia_aperea
ENSHCOG00000006741	-	90	57.333	ENSCPOG00000005941	RAD54L2	92	55.758	Cavia_porcellus
ENSHCOG00000006741	-	78	57.057	ENSCCAG00000024465	RAD54L2	86	57.314	Cebus_capucinus
ENSHCOG00000006741	-	90	57.587	ENSCATG00000039891	RAD54L2	89	57.778	Cercocebus_atys
ENSHCOG00000006741	-	90	57.735	ENSCLAG00000008059	RAD54L2	92	56.171	Chinchilla_lanigera
ENSHCOG00000006741	-	90	57.587	ENSCSAG00000014027	RAD54L2	88	57.704	Chlorocebus_sabaeus
ENSHCOG00000006741	-	97	57.287	ENSCPBG00000016624	RAD54L2	97	57.963	Chrysemys_picta_bellii
ENSHCOG00000006741	-	70	50.287	ENSCING00000009208	-	95	49.859	Ciona_intestinalis
ENSHCOG00000006741	-	90	57.439	ENSCANG00000036093	RAD54L2	89	57.661	Colobus_angolensis_palliatus
ENSHCOG00000006741	-	91	56.751	ENSCGRG00000007921	Rad54l2	90	56.968	Cricetulus_griseus_crigri
ENSHCOG00000006741	-	87	73.484	ENSCSEG00000006115	-	99	72.789	Cynoglossus_semilaevis
ENSHCOG00000006741	-	95	55.440	ENSCSEG00000001740	rad54l2	93	55.617	Cynoglossus_semilaevis
ENSHCOG00000006741	-	100	70.114	ENSCVAG00000005376	-	99	70.308	Cyprinodon_variegatus
ENSHCOG00000006741	-	95	57.698	ENSCVAG00000017887	rad54l2	93	58.177	Cyprinodon_variegatus
ENSHCOG00000006741	-	90	60.899	ENSDARG00000063031	rad54l2	95	59.315	Danio_rerio
ENSHCOG00000006741	-	90	56.763	ENSDNOG00000017359	RAD54L2	91	56.911	Dasypus_novemcinctus
ENSHCOG00000006741	-	82	66.460	ENSDORG00000000651	Rad54l2	87	65.301	Dipodomys_ordii
ENSHCOG00000006741	-	57	58.824	FBgn0034976	CG4049	56	51.887	Drosophila_melanogaster
ENSHCOG00000006741	-	89	56.443	ENSETEG00000013290	RAD54L2	94	56.190	Echinops_telfairi
ENSHCOG00000006741	-	92	48.151	ENSEBUG00000001591	rad54l2	75	59.202	Eptatretus_burgeri
ENSHCOG00000006741	-	90	57.513	ENSEASG00005012868	RAD54L2	91	56.447	Equus_asinus_asinus
ENSHCOG00000006741	-	90	57.513	ENSECAG00000014759	RAD54L2	88	57.481	Equus_caballus
ENSHCOG00000006741	-	79	64.516	ENSEEUG00000001759	RAD54L2	83	64.516	Erinaceus_europaeus
ENSHCOG00000006741	-	97	65.642	ENSELUG00000011246	RAD54L2	97	65.500	Esox_lucius
ENSHCOG00000006741	-	93	55.509	ENSFCAG00000018563	RAD54L2	88	57.481	Felis_catus
ENSHCOG00000006741	-	83	63.644	ENSFALG00000008938	RAD54L2	96	61.239	Ficedula_albicollis
ENSHCOG00000006741	-	90	57.185	ENSFDAG00000017084	RAD54L2	92	55.618	Fukomys_damarensis
ENSHCOG00000006741	-	95	58.523	ENSFHEG00000023241	rad54l2	93	57.880	Fundulus_heteroclitus
ENSHCOG00000006741	-	99	71.690	ENSFHEG00000017845	-	99	71.515	Fundulus_heteroclitus
ENSHCOG00000006741	-	92	59.410	ENSGMOG00000010674	rad54l2	98	58.768	Gadus_morhua
ENSHCOG00000006741	-	92	59.265	ENSGALG00000003243	RAD54L2	94	57.576	Gallus_gallus
ENSHCOG00000006741	-	97	72.067	ENSGAFG00000002396	-	99	71.854	Gambusia_affinis
ENSHCOG00000006741	-	95	58.650	ENSGAFG00000021535	rad54l2	93	57.862	Gambusia_affinis
ENSHCOG00000006741	-	92	58.237	ENSGACG00000001558	rad54l2	97	57.759	Gasterosteus_aculeatus
ENSHCOG00000006741	-	88	72.531	ENSGACG00000005642	-	100	72.531	Gasterosteus_aculeatus
ENSHCOG00000006741	-	90	60.029	ENSGAGG00000020971	RAD54L2	92	60.089	Gopherus_agassizii
ENSHCOG00000006741	-	90	57.556	ENSGGOG00000010032	RAD54L2	89	57.778	Gorilla_gorilla
ENSHCOG00000006741	-	92	58.233	ENSHBUG00000012480	rad54l2	93	58.762	Haplochromis_burtoni
ENSHCOG00000006741	-	97	73.856	ENSHBUG00000018930	-	99	74.198	Haplochromis_burtoni
ENSHCOG00000006741	-	90	57.333	ENSHGLG00000012116	RAD54L2	88	57.481	Heterocephalus_glaber_female
ENSHCOG00000006741	-	90	57.333	ENSHGLG00100007205	RAD54L2	88	57.481	Heterocephalus_glaber_male
ENSHCOG00000006741	-	74	65.691	ENSIPUG00000019664	rad54l2	94	55.517	Ictalurus_punctatus
ENSHCOG00000006741	-	95	58.184	ENSIPUG00000024973	-	97	58.184	Ictalurus_punctatus
ENSHCOG00000006741	-	93	56.628	ENSSTOG00000010014	RAD54L2	92	55.963	Ictidomys_tridecemlineatus
ENSHCOG00000006741	-	90	57.354	ENSJJAG00000014332	Rad54l2	88	57.576	Jaculus_jaculus
ENSHCOG00000006741	-	99	72.411	ENSKMAG00000002931	-	99	72.635	Kryptolebias_marmoratus
ENSHCOG00000006741	-	93	58.090	ENSKMAG00000001976	rad54l2	94	57.879	Kryptolebias_marmoratus
ENSHCOG00000006741	-	92	59.375	ENSLBEG00000018779	rad54l2	94	58.333	Labrus_bergylta
ENSHCOG00000006741	-	86	75.138	ENSLBEG00000008534	-	99	75.566	Labrus_bergylta
ENSHCOG00000006741	-	93	55.579	ENSLACG00000016004	RAD54L2	97	54.018	Latimeria_chalumnae
ENSHCOG00000006741	-	72	68.901	ENSLOCG00000014222	rad54l2	99	68.994	Lepisosteus_oculatus
ENSHCOG00000006741	-	90	57.322	ENSLAFG00000005966	RAD54L2	88	57.418	Loxodonta_africana
ENSHCOG00000006741	-	90	57.661	ENSMFAG00000041836	RAD54L2	89	57.852	Macaca_fascicularis
ENSHCOG00000006741	-	90	57.630	ENSMMUG00000012002	RAD54L2	88	57.778	Macaca_mulatta
ENSHCOG00000006741	-	90	57.661	ENSMNEG00000035063	RAD54L2	90	57.778	Macaca_nemestrina
ENSHCOG00000006741	-	90	57.661	ENSMLEG00000034668	RAD54L2	89	57.852	Mandrillus_leucophaeus
ENSHCOG00000006741	-	99	74.404	ENSMAMG00000015321	-	99	74.839	Mastacembelus_armatus
ENSHCOG00000006741	-	96	57.066	ENSMAMG00000023761	rad54l2	96	56.787	Mastacembelus_armatus
ENSHCOG00000006741	-	97	73.976	ENSMZEG00005021308	-	99	74.265	Maylandia_zebra
ENSHCOG00000006741	-	92	57.887	ENSMZEG00005012584	rad54l2	94	58.640	Maylandia_zebra
ENSHCOG00000006741	-	92	58.887	ENSMGAG00000002911	RAD54L2	90	59.032	Meleagris_gallopavo
ENSHCOG00000006741	-	69	66.084	ENSMAUG00000011651	Rad54l2	97	63.101	Mesocricetus_auratus
ENSHCOG00000006741	-	94	55.938	ENSMICG00000002777	RAD54L2	92	56.025	Microcebus_murinus
ENSHCOG00000006741	-	90	57.249	ENSMOCG00000022448	Rad54l2	89	57.470	Microtus_ochrogaster
ENSHCOG00000006741	-	83	61.909	ENSMMOG00000021709	rad54l2	92	58.737	Mola_mola
ENSHCOG00000006741	-	93	73.410	ENSMMOG00000016901	-	99	73.429	Mola_mola
ENSHCOG00000006741	-	91	60.290	ENSMODG00000011850	RAD54L2	96	60.043	Monodelphis_domestica
ENSHCOG00000006741	-	86	73.364	ENSMALG00000015084	-	96	78.597	Monopterus_albus
ENSHCOG00000006741	-	90	56.984	MGP_CAROLIEiJ_G0032634	Rad54l2	88	56.975	Mus_caroli
ENSHCOG00000006741	-	90	56.911	ENSMUSG00000040661	Rad54l2	88	57.132	Mus_musculus
ENSHCOG00000006741	-	90	56.984	MGP_PahariEiJ_G0015502	Rad54l2	88	56.975	Mus_pahari
ENSHCOG00000006741	-	90	56.765	MGP_SPRETEiJ_G0033779	Rad54l2	88	56.985	Mus_spretus
ENSHCOG00000006741	-	93	55.439	ENSMPUG00000011865	RAD54L2	88	57.407	Mustela_putorius_furo
ENSHCOG00000006741	-	90	57.758	ENSMLUG00000004605	RAD54L2	92	55.773	Myotis_lucifugus
ENSHCOG00000006741	-	90	57.206	ENSNGAG00000015629	Rad54l2	88	57.354	Nannospalax_galili
ENSHCOG00000006741	-	85	61.875	ENSNBRG00000001937	rad54l2	86	62.320	Neolamprologus_brichardi
ENSHCOG00000006741	-	97	73.768	ENSNBRG00000022847	-	99	74.015	Neolamprologus_brichardi
ENSHCOG00000006741	-	90	57.630	ENSNLEG00000007038	RAD54L2	92	55.969	Nomascus_leucogenys
ENSHCOG00000006741	-	87	70.092	ENSMEUG00000009835	RAD54L2	92	70.092	Notamacropus_eugenii
ENSHCOG00000006741	-	90	57.365	ENSODEG00000018266	RAD54L2	88	57.513	Octodon_degus
ENSHCOG00000006741	-	92	59.869	ENSONIG00000014468	rad54l2	94	58.521	Oreochromis_niloticus
ENSHCOG00000006741	-	97	74.214	ENSONIG00000001663	-	98	74.323	Oreochromis_niloticus
ENSHCOG00000006741	-	92	59.427	ENSOANG00000012793	RAD54L2	97	57.776	Ornithorhynchus_anatinus
ENSHCOG00000006741	-	90	57.556	ENSOCUG00000017577	RAD54L2	88	57.652	Oryctolagus_cuniculus
ENSHCOG00000006741	-	92	59.032	ENSORLG00000002276	rad54l2	94	57.851	Oryzias_latipes
ENSHCOG00000006741	-	99	69.367	ENSORLG00000002714	-	99	69.049	Oryzias_latipes
ENSHCOG00000006741	-	99	68.822	ENSORLG00020019256	-	99	68.577	Oryzias_latipes_hni
ENSHCOG00000006741	-	95	58.035	ENSORLG00020003470	rad54l2	96	57.505	Oryzias_latipes_hni
ENSHCOG00000006741	-	99	69.378	ENSORLG00015013408	-	99	68.982	Oryzias_latipes_hsok
ENSHCOG00000006741	-	92	59.209	ENSORLG00015021530	rad54l2	94	57.866	Oryzias_latipes_hsok
ENSHCOG00000006741	-	92	58.160	ENSOMEG00000005597	rad54l2	94	57.301	Oryzias_melastigma
ENSHCOG00000006741	-	100	67.613	ENSOMEG00000008216	-	99	67.814	Oryzias_melastigma
ENSHCOG00000006741	-	75	58.844	ENSOGAG00000012442	RAD54L2	93	59.111	Otolemur_garnettii
ENSHCOG00000006741	-	94	55.868	ENSOARG00000007264	RAD54L2	92	55.955	Ovis_aries
ENSHCOG00000006741	-	90	57.556	ENSPPAG00000038472	RAD54L2	89	57.778	Pan_paniscus
ENSHCOG00000006741	-	93	55.509	ENSPPRG00000010212	RAD54L2	88	57.481	Panthera_pardus
ENSHCOG00000006741	-	93	55.509	ENSPTIG00000002240	RAD54L2	88	57.481	Panthera_tigris_altaica
ENSHCOG00000006741	-	90	57.556	ENSPTRG00000014974	RAD54L2	89	57.778	Pan_troglodytes
ENSHCOG00000006741	-	90	57.661	ENSPANG00000000857	RAD54L2	89	57.852	Papio_anubis
ENSHCOG00000006741	-	95	64.433	ENSPKIG00000001065	rad54l2	97	63.756	Paramormyrops_kingsleyae
ENSHCOG00000006741	-	69	68.266	ENSPSIG00000014346	RAD54L2	96	65.091	Pelodiscus_sinensis
ENSHCOG00000006741	-	95	66.405	ENSPMGG00000000641	-	99	65.155	Periophthalmus_magnuspinnatus
ENSHCOG00000006741	-	75	63.229	ENSPMGG00000002208	rad54l2	96	59.462	Periophthalmus_magnuspinnatus
ENSHCOG00000006741	-	90	57.101	ENSPEMG00000012051	Rad54l2	88	57.322	Peromyscus_maniculatus_bairdii
ENSHCOG00000006741	-	85	61.563	ENSPCIG00000018143	RAD54L2	92	61.502	Phascolarctos_cinereus
ENSHCOG00000006741	-	97	72.416	ENSPFOG00000000197	-	99	72.027	Poecilia_formosa
ENSHCOG00000006741	-	95	58.110	ENSPFOG00000018644	rad54l2	93	57.599	Poecilia_formosa
ENSHCOG00000006741	-	95	58.304	ENSPLAG00000006015	rad54l2	94	56.954	Poecilia_latipinna
ENSHCOG00000006741	-	97	72.187	ENSPLAG00000013908	-	99	71.805	Poecilia_latipinna
ENSHCOG00000006741	-	97	72.137	ENSPMEG00000009878	-	99	71.824	Poecilia_mexicana
ENSHCOG00000006741	-	95	58.251	ENSPMEG00000021535	rad54l2	95	57.095	Poecilia_mexicana
ENSHCOG00000006741	-	94	57.790	ENSPREG00000008628	rad54l2	97	58.585	Poecilia_reticulata
ENSHCOG00000006741	-	97	72.797	ENSPREG00000013377	RAD54L2	99	72.290	Poecilia_reticulata
ENSHCOG00000006741	-	90	57.630	ENSPPYG00000013831	RAD54L2	91	57.852	Pongo_abelii
ENSHCOG00000006741	-	73	60.853	ENSPCAG00000011952	RAD54L2	78	60.853	Procavia_capensis
ENSHCOG00000006741	-	90	57.481	ENSPCOG00000015983	RAD54L2	92	55.634	Propithecus_coquereli
ENSHCOG00000006741	-	97	73.907	ENSPNYG00000011435	-	99	74.198	Pundamilia_nyererei
ENSHCOG00000006741	-	85	61.642	ENSPNYG00000020693	rad54l2	87	62.005	Pundamilia_nyererei
ENSHCOG00000006741	-	97	61.050	ENSPNAG00000011583	-	97	61.512	Pygocentrus_nattereri
ENSHCOG00000006741	-	92	60.409	ENSPNAG00000006451	rad54l2	97	58.328	Pygocentrus_nattereri
ENSHCOG00000006741	-	68	65.109	ENSRNOG00000049489	LOC102552166	91	65.109	Rattus_norvegicus
ENSHCOG00000006741	-	90	54.210	ENSRNOG00000013570	Rad54l2	88	54.431	Rattus_norvegicus
ENSHCOG00000006741	-	90	57.587	ENSRBIG00000032434	RAD54L2	94	59.268	Rhinopithecus_bieti
ENSHCOG00000006741	-	90	57.513	ENSRROG00000042309	RAD54L2	92	55.860	Rhinopithecus_roxellana
ENSHCOG00000006741	-	90	57.228	ENSSBOG00000002139	RAD54L2	92	55.587	Saimiri_boliviensis_boliviensis
ENSHCOG00000006741	-	92	59.871	ENSSHAG00000008604	RAD54L2	97	57.909	Sarcophilus_harrisii
ENSHCOG00000006741	-	97	63.624	ENSSFOG00015019014	rad54l2	98	63.418	Scleropages_formosus
ENSHCOG00000006741	-	97	72.924	ENSSMAG00000009978	-	99	72.690	Scophthalmus_maximus
ENSHCOG00000006741	-	93	57.407	ENSSMAG00000020933	rad54l2	95	56.927	Scophthalmus_maximus
ENSHCOG00000006741	-	96	57.502	ENSSDUG00000014268	rad54l2	97	57.402	Seriola_dumerili
ENSHCOG00000006741	-	97	76.187	ENSSDUG00000016711	-	99	75.506	Seriola_dumerili
ENSHCOG00000006741	-	93	74.311	ENSSLDG00000023388	-	99	73.916	Seriola_lalandi_dorsalis
ENSHCOG00000006741	-	92	59.355	ENSSLDG00000023959	rad54l2	97	59.913	Seriola_lalandi_dorsalis
ENSHCOG00000006741	-	91	76.553	ENSSPAG00000006371	-	99	76.462	Stegastes_partitus
ENSHCOG00000006741	-	93	58.193	ENSSPAG00000016532	rad54l2	95	57.806	Stegastes_partitus
ENSHCOG00000006741	-	90	57.504	ENSSSCG00000011425	RAD54L2	92	55.704	Sus_scrofa
ENSHCOG00000006741	-	92	59.134	ENSTGUG00000004888	RAD54L2	95	57.231	Taeniopygia_guttata
ENSHCOG00000006741	-	90	59.246	ENSTRUG00000013962	rad54l2	93	57.393	Takifugu_rubripes
ENSHCOG00000006741	-	100	70.771	ENSTRUG00000011066	-	99	71.177	Takifugu_rubripes
ENSHCOG00000006741	-	76	75.314	ENSTNIG00000006049	-	99	75.314	Tetraodon_nigroviridis
ENSHCOG00000006741	-	74	67.301	ENSTNIG00000014694	rad54l2	99	65.266	Tetraodon_nigroviridis
ENSHCOG00000006741	-	84	57.348	ENSTBEG00000003377	RAD54L2	93	57.827	Tupaia_belangeri
ENSHCOG00000006741	-	90	57.605	ENSUAMG00000020891	RAD54L2	91	57.090	Ursus_americanus
ENSHCOG00000006741	-	90	57.452	ENSUMAG00000021678	RAD54L2	88	57.675	Ursus_maritimus
ENSHCOG00000006741	-	93	55.439	ENSVVUG00000026874	RAD54L2	91	57.556	Vulpes_vulpes
ENSHCOG00000006741	-	94	57.800	ENSXETG00000000070	rad54l2	81	64.778	Xenopus_tropicalis
ENSHCOG00000006741	-	88	57.424	ENSXCOG00000004961	rad54l2	91	56.227	Xiphophorus_couchianus
ENSHCOG00000006741	-	93	68.955	ENSXCOG00000002848	-	99	68.525	Xiphophorus_couchianus
ENSHCOG00000006741	-	95	57.999	ENSXMAG00000017182	rad54l2	97	59.081	Xiphophorus_maculatus
ENSHCOG00000006741	-	97	72.378	ENSXMAG00000019370	-	99	72.192	Xiphophorus_maculatus