EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000006755 (Gene tree)
Gene ID: -
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 28255 bases
Position: chrKV880077.1:179174-207428
Accession: 109519641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020552	zf-met	PF12874.7	2.4e-05	1	1
ENSHCOP00000005118	IPPT	PF01715.17	3.3e-60	1	1
ENSHCOP00000020552	IPPT	PF01715.17	3.8e-10	1	1
ENSHCOP00000020552	zf-C2H2_jaz	PF12171.8	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005903	-	1476	XM_019876306	ENSHCOP00000005118	491 (aa)	XP_019731865	-
ENSHCOT00000005910	-	794	-	ENSHCOP00000020552	217 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000006755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006755	trit1	95	57.741	ENSG00000043514	TRIT1	99	60.112	Homo_sapiens
ENSHCOG00000006755	trit1	85	83.243	ENSAPOG00000020918	trit1	87	77.108	Acanthochromis_polyacanthus
ENSHCOG00000006755	trit1	92	57.328	ENSAMEG00000004342	TRIT1	88	61.085	Ailuropoda_melanoleuca
ENSHCOG00000006755	trit1	80	78.500	ENSACIG00000017409	trit1	85	78.465	Amphilophus_citrinellus
ENSHCOG00000006755	trit1	85	81.622	ENSAOCG00000009850	trit1	84	77.108	Amphiprion_ocellaris
ENSHCOG00000006755	trit1	85	81.622	ENSAPEG00000001481	trit1	84	77.349	Amphiprion_percula
ENSHCOG00000006755	trit1	84	73.474	ENSATEG00000005426	trit1	86	73.474	Anabas_testudineus
ENSHCOG00000006755	trit1	79	54.971	ENSAPLG00000011421	TRIT1	89	53.185	Anas_platyrhynchos
ENSHCOG00000006755	trit1	80	61.330	ENSACAG00000002280	TRIT1	81	61.330	Anolis_carolinensis
ENSHCOG00000006755	trit1	95	57.113	ENSANAG00000030732	TRIT1	99	57.113	Aotus_nancymaae
ENSHCOG00000006755	trit1	98	70.561	ENSACLG00000004920	trit1	85	76.145	Astatotilapia_calliptera
ENSHCOG00000006755	trit1	82	72.472	ENSAMXG00000010959	trit1	90	69.231	Astyanax_mexicanus
ENSHCOG00000006755	trit1	98	51.415	ENSBTAG00000013832	TRIT1	88	60.849	Bos_taurus
ENSHCOG00000006755	trit1	78	34.783	WBGene00001740	gro-1	90	34.300	Caenorhabditis_elegans
ENSHCOG00000006755	trit1	95	57.322	ENSCJAG00000002620	TRIT1	96	63.873	Callithrix_jacchus
ENSHCOG00000006755	trit1	83	61.374	ENSCAFG00000003048	TRIT1	88	61.085	Canis_familiaris
ENSHCOG00000006755	trit1	83	60.798	ENSCAFG00020003875	TRIT1	96	61.891	Canis_lupus_dingo
ENSHCOG00000006755	trit1	98	52.358	ENSCHIG00000013259	TRIT1	88	61.557	Capra_hircus
ENSHCOG00000006755	trit1	98	52.830	ENSTSYG00000004363	TRIT1	88	61.792	Carlito_syrichta
ENSHCOG00000006755	trit1	98	51.643	ENSCAPG00000017001	TRIT1	79	60.984	Cavia_aperea
ENSHCOG00000006755	trit1	98	51.174	ENSCPOG00000012820	TRIT1	88	60.849	Cavia_porcellus
ENSHCOG00000006755	trit1	96	56.936	ENSCCAG00000031271	TRIT1	95	61.272	Cebus_capucinus
ENSHCOG00000006755	trit1	85	59.070	ENSCATG00000034344	TRIT1	96	63.006	Cercocebus_atys
ENSHCOG00000006755	trit1	82	61.151	ENSCLAG00000009828	TRIT1	85	61.557	Chinchilla_lanigera
ENSHCOG00000006755	trit1	95	52.657	ENSCSAG00000001137	TRIT1	87	61.892	Chlorocebus_sabaeus
ENSHCOG00000006755	trit1	97	54.762	ENSCHOG00000000435	TRIT1	98	58.526	Choloepus_hoffmanni
ENSHCOG00000006755	trit1	90	54.872	ENSCPBG00000000908	-	91	54.872	Chrysemys_picta_bellii
ENSHCOG00000006755	trit1	79	43.689	ENSCSAVG00000002050	-	88	43.689	Ciona_savignyi
ENSHCOG00000006755	trit1	95	58.159	ENSCANG00000043008	TRIT1	96	62.717	Colobus_angolensis_palliatus
ENSHCOG00000006755	trit1	98	51.887	ENSCGRG00001001894	Trit1	88	61.557	Cricetulus_griseus_chok1gshd
ENSHCOG00000006755	trit1	98	51.887	ENSCGRG00000007059	Trit1	80	61.141	Cricetulus_griseus_crigri
ENSHCOG00000006755	trit1	83	71.765	ENSCSEG00000009574	trit1	86	73.317	Cynoglossus_semilaevis
ENSHCOG00000006755	trit1	82	74.719	ENSCVAG00000016675	trit1	79	74.719	Cyprinodon_variegatus
ENSHCOG00000006755	trit1	85	70.652	ENSDARG00000032876	trit1	98	68.976	Danio_rerio
ENSHCOG00000006755	trit1	92	52.418	ENSDNOG00000001994	TRIT1	89	55.042	Dasypus_novemcinctus
ENSHCOG00000006755	trit1	88	57.292	ENSDORG00000012449	Trit1	90	55.000	Dipodomys_ordii
ENSHCOG00000006755	trit1	79	38.747	FBgn0043799	CG31381	87	38.747	Drosophila_melanogaster
ENSHCOG00000006755	trit1	81	63.260	ENSETEG00000008733	TRIT1	99	62.264	Echinops_telfairi
ENSHCOG00000006755	trit1	81	54.458	ENSEBUG00000012845	trit1	89	54.458	Eptatretus_burgeri
ENSHCOG00000006755	trit1	98	51.415	ENSEASG00005000884	-	96	51.415	Equus_asinus_asinus
ENSHCOG00000006755	trit1	98	50.943	ENSECAG00000010597	TRIT1	91	56.813	Equus_caballus
ENSHCOG00000006755	trit1	69	58.286	ENSEEUG00000009269	TRIT1	76	57.064	Erinaceus_europaeus
ENSHCOG00000006755	trit1	81	67.561	ENSELUG00000017278	trit1	84	67.561	Esox_lucius
ENSHCOG00000006755	trit1	95	51.691	ENSFCAG00000006029	TRIT1	88	61.412	Felis_catus
ENSHCOG00000006755	trit1	87	57.592	ENSFALG00000000532	TRIT1	89	62.295	Ficedula_albicollis
ENSHCOG00000006755	trit1	82	61.575	ENSFDAG00000003098	TRIT1	94	60.798	Fukomys_damarensis
ENSHCOG00000006755	trit1	65	67.372	ENSFHEG00000022274	trit1	97	67.372	Fundulus_heteroclitus
ENSHCOG00000006755	trit1	83	78.453	ENSGMOG00000006522	trit1	96	71.596	Gadus_morhua
ENSHCOG00000006755	trit1	86	57.527	ENSGALG00000003851	TRIT1	85	63.158	Gallus_gallus
ENSHCOG00000006755	trit1	69	71.014	ENSGAFG00000018636	trit1	97	75.564	Gambusia_affinis
ENSHCOG00000006755	trit1	85	78.919	ENSGACG00000008493	trit1	94	76.386	Gasterosteus_aculeatus
ENSHCOG00000006755	trit1	83	56.667	ENSGAGG00000000522	TRIT1	88	61.308	Gopherus_agassizii
ENSHCOG00000006755	trit1	95	57.741	ENSGGOG00000010070	TRIT1	95	62.899	Gorilla_gorilla
ENSHCOG00000006755	trit1	98	70.561	ENSHBUG00000018999	trit1	85	76.145	Haplochromis_burtoni
ENSHCOG00000006755	trit1	82	55.583	ENSHGLG00000009564	-	89	54.893	Heterocephalus_glaber_female
ENSHCOG00000006755	trit1	86	59.174	ENSHGLG00000010308	-	90	59.302	Heterocephalus_glaber_female
ENSHCOG00000006755	trit1	86	59.174	ENSHGLG00100015382	-	90	60.047	Heterocephalus_glaber_male
ENSHCOG00000006755	trit1	82	55.056	ENSHGLG00100018159	-	81	76.923	Heterocephalus_glaber_male
ENSHCOG00000006755	trit1	84	70.330	ENSIPUG00000021822	trit1	84	70.983	Ictalurus_punctatus
ENSHCOG00000006755	trit1	94	51.232	ENSSTOG00000006446	TRIT1	86	60.235	Ictidomys_tridecemlineatus
ENSHCOG00000006755	trit1	85	59.140	ENSJJAG00000000300	-	88	55.660	Jaculus_jaculus
ENSHCOG00000006755	trit1	82	58.413	ENSJJAG00000000316	-	88	58.780	Jaculus_jaculus
ENSHCOG00000006755	trit1	96	69.767	ENSKMAG00000021788	trit1	84	76.867	Kryptolebias_marmoratus
ENSHCOG00000006755	trit1	99	73.148	ENSLBEG00000024262	trit1	86	75.878	Labrus_bergylta
ENSHCOG00000006755	trit1	94	58.824	ENSLACG00000013861	TRIT1	87	60.321	Latimeria_chalumnae
ENSHCOG00000006755	trit1	83	66.667	ENSLOCG00000002057	trit1	86	66.828	Lepisosteus_oculatus
ENSHCOG00000006755	trit1	95	57.531	ENSLAFG00000016876	TRIT1	88	61.176	Loxodonta_africana
ENSHCOG00000006755	trit1	85	61.628	ENSMFAG00000001316	TRIT1	96	63.006	Macaca_fascicularis
ENSHCOG00000006755	trit1	85	61.628	ENSMMUG00000016220	TRIT1	96	63.006	Macaca_mulatta
ENSHCOG00000006755	trit1	85	61.628	ENSMNEG00000023137	TRIT1	96	63.006	Macaca_nemestrina
ENSHCOG00000006755	trit1	85	61.628	ENSMLEG00000035296	TRIT1	96	63.006	Mandrillus_leucophaeus
ENSHCOG00000006755	trit1	81	75.243	ENSMAMG00000005868	trit1	94	68.700	Mastacembelus_armatus
ENSHCOG00000006755	trit1	98	70.561	ENSMZEG00005011506	trit1	85	76.145	Maylandia_zebra
ENSHCOG00000006755	trit1	82	57.303	ENSMGAG00000005516	TRIT1	96	61.749	Meleagris_gallopavo
ENSHCOG00000006755	trit1	98	51.887	ENSMAUG00000000399	Trit1	88	60.849	Mesocricetus_auratus
ENSHCOG00000006755	trit1	92	57.974	ENSMICG00000016294	TRIT1	88	60.941	Microcebus_murinus
ENSHCOG00000006755	trit1	96	51.905	ENSMOCG00000008173	Trit1	88	60.849	Microtus_ochrogaster
ENSHCOG00000006755	trit1	84	78.022	ENSMMOG00000021140	trit1	84	75.815	Mola_mola
ENSHCOG00000006755	trit1	82	61.871	ENSMODG00000017650	TRIT1	91	61.283	Monodelphis_domestica
ENSHCOG00000006755	trit1	85	77.174	ENSMALG00000017843	trit1	86	71.868	Monopterus_albus
ENSHCOG00000006755	trit1	82	62.590	MGP_CAROLIEiJ_G0026428	Trit1	88	62.028	Mus_caroli
ENSHCOG00000006755	trit1	82	62.830	ENSMUSG00000028653	Trit1	88	62.264	Mus_musculus
ENSHCOG00000006755	trit1	95	52.174	MGP_PahariEiJ_G0028758	Trit1	88	62.264	Mus_pahari
ENSHCOG00000006755	trit1	82	62.590	MGP_SPRETEiJ_G0027408	Trit1	88	62.028	Mus_spretus
ENSHCOG00000006755	trit1	87	60.271	ENSMPUG00000014291	TRIT1	88	61.792	Mustela_putorius_furo
ENSHCOG00000006755	trit1	82	60.192	ENSMLUG00000000334	TRIT1	88	59.670	Myotis_lucifugus
ENSHCOG00000006755	trit1	95	57.950	ENSNLEG00000012038	TRIT1	96	63.006	Nomascus_leucogenys
ENSHCOG00000006755	trit1	84	57.143	ENSMEUG00000005217	TRIT1	88	53.207	Notamacropus_eugenii
ENSHCOG00000006755	trit1	59	55.000	ENSOPRG00000003205	-	62	53.774	Ochotona_princeps
ENSHCOG00000006755	trit1	98	49.296	ENSODEG00000006117	TRIT1	86	61.071	Octodon_degus
ENSHCOG00000006755	trit1	98	71.028	ENSONIG00000015407	trit1	85	77.536	Oreochromis_niloticus
ENSHCOG00000006755	trit1	82	56.180	ENSOANG00000002779	TRIT1	90	59.726	Ornithorhynchus_anatinus
ENSHCOG00000006755	trit1	94	53.202	ENSOCUG00000002054	TRIT1	88	62.824	Oryctolagus_cuniculus
ENSHCOG00000006755	trit1	85	73.913	ENSORLG00000005802	trit1	87	74.334	Oryzias_latipes
ENSHCOG00000006755	trit1	85	72.826	ENSORLG00020005519	trit1	87	74.334	Oryzias_latipes_hni
ENSHCOG00000006755	trit1	85	73.370	ENSORLG00015018715	trit1	87	74.334	Oryzias_latipes_hsok
ENSHCOG00000006755	trit1	84	75.824	ENSOMEG00000006569	trit1	87	73.671	Oryzias_melastigma
ENSHCOG00000006755	trit1	92	58.887	ENSOGAG00000009571	TRIT1	99	58.004	Otolemur_garnettii
ENSHCOG00000006755	trit1	92	57.759	ENSOARG00000020140	TRIT1	88	61.321	Ovis_aries
ENSHCOG00000006755	trit1	95	57.741	ENSPPAG00000023930	TRIT1	96	63.006	Pan_paniscus
ENSHCOG00000006755	trit1	95	51.208	ENSPPRG00000009680	TRIT1	88	61.176	Panthera_pardus
ENSHCOG00000006755	trit1	95	51.208	ENSPTIG00000021134	TRIT1	88	61.176	Panthera_tigris_altaica
ENSHCOG00000006755	trit1	95	57.741	ENSPTRG00000000579	TRIT1	96	63.006	Pan_troglodytes
ENSHCOG00000006755	trit1	85	61.395	ENSPANG00000018125	TRIT1	96	62.717	Papio_anubis
ENSHCOG00000006755	trit1	84	67.033	ENSPKIG00000024527	trit1	91	67.956	Paramormyrops_kingsleyae
ENSHCOG00000006755	trit1	73	56.329	ENSPSIG00000017073	TRIT1	99	48.468	Pelodiscus_sinensis
ENSHCOG00000006755	trit1	77	79.762	ENSPMGG00000018445	trit1	88	75.405	Periophthalmus_magnuspinnatus
ENSHCOG00000006755	trit1	98	51.415	ENSPEMG00000022418	Trit1	88	60.613	Peromyscus_maniculatus_bairdii
ENSHCOG00000006755	trit1	84	56.831	ENSPMAG00000008892	trit1	93	56.250	Petromyzon_marinus
ENSHCOG00000006755	trit1	84	58.791	ENSPCIG00000020666	TRIT1	97	59.714	Phascolarctos_cinereus
ENSHCOG00000006755	trit1	97	70.892	ENSPFOG00000014626	trit1	86	74.341	Poecilia_formosa
ENSHCOG00000006755	trit1	65	74.154	ENSPLAG00000011669	trit1	94	72.289	Poecilia_latipinna
ENSHCOG00000006755	trit1	53	76.154	ENSPMEG00000023788	trit1	93	76.154	Poecilia_mexicana
ENSHCOG00000006755	trit1	87	72.872	ENSPMEG00000023796	trit1	84	72.872	Poecilia_mexicana
ENSHCOG00000006755	trit1	65	74.923	ENSPREG00000018182	trit1	90	73.375	Poecilia_reticulata
ENSHCOG00000006755	trit1	95	57.950	ENSPPYG00000001499	TRIT1	99	57.950	Pongo_abelii
ENSHCOG00000006755	trit1	88	55.729	ENSPCAG00000014680	TRIT1	86	51.125	Procavia_capensis
ENSHCOG00000006755	trit1	98	50.943	ENSPCOG00000014150	TRIT1	89	60.233	Propithecus_coquereli
ENSHCOG00000006755	trit1	98	52.535	ENSPVAG00000003344	TRIT1	99	51.046	Pteropus_vampyrus
ENSHCOG00000006755	trit1	57	77.740	ENSPNYG00000001003	trit1	91	78.007	Pundamilia_nyererei
ENSHCOG00000006755	trit1	84	70.879	ENSPNAG00000009466	trit1	93	68.901	Pygocentrus_nattereri
ENSHCOG00000006755	trit1	82	62.945	ENSRNOG00000014274	Trit1	88	62.500	Rattus_norvegicus
ENSHCOG00000006755	trit1	95	57.322	ENSRBIG00000043179	TRIT1	96	62.428	Rhinopithecus_bieti
ENSHCOG00000006755	trit1	95	57.322	ENSRROG00000042670	TRIT1	96	62.428	Rhinopithecus_roxellana
ENSHCOG00000006755	trit1	82	31.935	YOR274W	-	92	31.935	Saccharomyces_cerevisiae
ENSHCOG00000006755	trit1	96	56.729	ENSSBOG00000024417	TRIT1	96	62.717	Saimiri_boliviensis_boliviensis
ENSHCOG00000006755	trit1	83	58.333	ENSSHAG00000018363	TRIT1	87	58.777	Sarcophilus_harrisii
ENSHCOG00000006755	trit1	84	67.582	ENSSFOG00015007284	trit1	79	68.215	Scleropages_formosus
ENSHCOG00000006755	trit1	85	76.630	ENSSMAG00000020730	trit1	87	73.239	Scophthalmus_maximus
ENSHCOG00000006755	trit1	100	68.559	ENSSDUG00000001683	trit1	85	75.644	Seriola_dumerili
ENSHCOG00000006755	trit1	99	70.000	ENSSLDG00000008379	trit1	85	74.941	Seriola_lalandi_dorsalis
ENSHCOG00000006755	trit1	83	62.233	ENSSARG00000004540	TRIT1	89	61.737	Sorex_araneus
ENSHCOG00000006755	trit1	90	54.872	ENSSPUG00000003472	TRIT1	74	60.989	Sphenodon_punctatus
ENSHCOG00000006755	trit1	81	77.129	ENSSPAG00000020745	trit1	90	77.129	Stegastes_partitus
ENSHCOG00000006755	trit1	93	53.234	ENSSSCG00000003667	-	81	65.986	Sus_scrofa
ENSHCOG00000006755	trit1	83	57.778	ENSTGUG00000001242	TRIT1	95	58.856	Taeniopygia_guttata
ENSHCOG00000006755	trit1	85	76.216	ENSTRUG00000013936	trit1	89	77.284	Takifugu_rubripes
ENSHCOG00000006755	trit1	99	65.888	ENSTNIG00000009240	trit1	89	75.845	Tetraodon_nigroviridis
ENSHCOG00000006755	trit1	66	74.194	ENSTBEG00000001317	TRIT1	70	68.224	Tupaia_belangeri
ENSHCOG00000006755	trit1	92	57.543	ENSTTRG00000005064	TRIT1	88	60.706	Tursiops_truncatus
ENSHCOG00000006755	trit1	53	60.526	ENSUAMG00000000522	-	98	59.140	Ursus_americanus
ENSHCOG00000006755	trit1	73	57.233	ENSUAMG00000000509	-	79	57.233	Ursus_americanus
ENSHCOG00000006755	trit1	92	57.759	ENSUMAG00000017299	TRIT1	81	60.557	Ursus_maritimus
ENSHCOG00000006755	trit1	98	50.943	ENSVPAG00000003008	TRIT1	88	57.547	Vicugna_pacos
ENSHCOG00000006755	trit1	88	55.385	ENSXETG00000010952	trit1	89	60.143	Xenopus_tropicalis
ENSHCOG00000006755	trit1	65	75.000	ENSXMAG00000016302	trit1	89	73.476	Xiphophorus_maculatus