EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006795 (Gene tree)
Gene ID: 109524911
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1213 bases
Position: chrKV880232.1:1079451-1080663
Accession: 109524911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005167	RRM_1	PF00076.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005816	-	647	XM_019885060	ENSHCOP00000005167	99 (aa)	XP_019740619	UPI00094E45CD

Gene Model

Click here to download ENSHCOG00000006795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006795	slirp	83	32.000	ENSHCOG00000000087	hnrnpd	57	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006795	slirp	87	52.326	ENSG00000119705	SLIRP	93	61.972	Homo_sapiens
ENSHCOG00000006795	slirp	96	80.000	ENSAPOG00000001298	slirp	95	80.000	Acanthochromis_polyacanthus
ENSHCOG00000006795	slirp	71	60.000	ENSAMEG00000003975	SLIRP	77	60.000	Ailuropoda_melanoleuca
ENSHCOG00000006795	slirp	95	79.787	ENSACIG00000023083	slirp	93	79.787	Amphilophus_citrinellus
ENSHCOG00000006795	slirp	94	84.946	ENSAOCG00000006342	slirp	94	84.946	Amphiprion_ocellaris
ENSHCOG00000006795	slirp	94	84.946	ENSAPEG00000015917	slirp	94	84.946	Amphiprion_percula
ENSHCOG00000006795	slirp	94	84.946	ENSAPEG00000015719	-	95	84.946	Amphiprion_percula
ENSHCOG00000006795	slirp	97	76.042	ENSATEG00000013525	slirp	96	76.042	Anabas_testudineus
ENSHCOG00000006795	slirp	100	58.586	ENSAMXG00000018693	slirp	99	58.586	Astyanax_mexicanus
ENSHCOG00000006795	slirp	77	65.789	ENSCJAG00000016946	SLIRP	72	64.179	Callithrix_jacchus
ENSHCOG00000006795	slirp	78	61.039	ENSCAFG00020015876	-	68	61.039	Canis_lupus_dingo
ENSHCOG00000006795	slirp	78	61.039	ENSCCAG00000030130	SLIRP	70	61.039	Cebus_capucinus
ENSHCOG00000006795	slirp	89	55.682	ENSCATG00000036327	SLIRP	72	64.179	Cercocebus_atys
ENSHCOG00000006795	slirp	89	56.818	ENSCSAG00000011736	SLIRP	81	56.180	Chlorocebus_sabaeus
ENSHCOG00000006795	slirp	89	63.636	ENSCPBG00000026327	SLIRP	87	63.636	Chrysemys_picta_bellii
ENSHCOG00000006795	slirp	69	63.235	ENSCANG00000032892	SLIRP	68	64.179	Colobus_angolensis_palliatus
ENSHCOG00000006795	slirp	99	49.495	ENSCGRG00001024068	Slirp	89	49.495	Cricetulus_griseus_chok1gshd
ENSHCOG00000006795	slirp	99	49.495	ENSCGRG00000017440	Slirp	89	49.495	Cricetulus_griseus_crigri
ENSHCOG00000006795	slirp	85	63.095	ENSCSEG00000015766	slirp	86	63.095	Cynoglossus_semilaevis
ENSHCOG00000006795	slirp	81	83.750	ENSCVAG00000012504	slirp	79	83.750	Cyprinodon_variegatus
ENSHCOG00000006795	slirp	94	80.645	ENSDARG00000097753	slirp	93	79.167	Danio_rerio
ENSHCOG00000006795	slirp	76	54.667	ENSDNOG00000007721	SLIRP	68	54.667	Dasypus_novemcinctus
ENSHCOG00000006795	slirp	86	52.941	ENSDORG00000012379	Slirp	75	52.941	Dipodomys_ordii
ENSHCOG00000006795	slirp	80	55.696	ENSETEG00000010345	SLIRP	73	55.696	Echinops_telfairi
ENSHCOG00000006795	slirp	90	53.846	ENSEASG00005020193	SLIRP	81	53.846	Equus_asinus_asinus
ENSHCOG00000006795	slirp	99	43.878	ENSEEUG00000007257	SLIRP	97	43.878	Erinaceus_europaeus
ENSHCOG00000006795	slirp	96	73.684	ENSELUG00000016800	slirp	94	73.684	Esox_lucius
ENSHCOG00000006795	slirp	77	57.895	ENSFCAG00000036326	SLIRP	76	57.895	Felis_catus
ENSHCOG00000006795	slirp	79	57.692	ENSFALG00000012583	SLIRP	88	51.613	Ficedula_albicollis
ENSHCOG00000006795	slirp	72	59.155	ENSFDAG00000008347	SLIRP	63	59.155	Fukomys_damarensis
ENSHCOG00000006795	slirp	75	82.432	ENSFHEG00000004709	slirp	80	82.432	Fundulus_heteroclitus
ENSHCOG00000006795	slirp	99	70.408	ENSGMOG00000016948	slirp	94	70.408	Gadus_morhua
ENSHCOG00000006795	slirp	96	55.208	ENSGALG00000031238	SLIRP	93	55.208	Gallus_gallus
ENSHCOG00000006795	slirp	97	80.208	ENSGAFG00000010998	slirp	96	80.208	Gambusia_affinis
ENSHCOG00000006795	slirp	83	80.488	ENSGACG00000020137	slirp	95	80.488	Gasterosteus_aculeatus
ENSHCOG00000006795	slirp	98	65.979	ENSGAGG00000009953	SLIRP	66	65.979	Gopherus_agassizii
ENSHCOG00000006795	slirp	78	61.039	ENSGGOG00000011059	-	73	63.235	Gorilla_gorilla
ENSHCOG00000006795	slirp	89	47.778	ENSHGLG00000018491	SLIRP	80	47.778	Heterocephalus_glaber_female
ENSHCOG00000006795	slirp	89	47.778	ENSHGLG00100014153	SLIRP	80	47.778	Heterocephalus_glaber_male
ENSHCOG00000006795	slirp	100	75.758	ENSIPUG00000010214	SLIRP	99	75.758	Ictalurus_punctatus
ENSHCOG00000006795	slirp	90	48.889	ENSSTOG00000034316	SLIRP	81	48.889	Ictidomys_tridecemlineatus
ENSHCOG00000006795	slirp	97	70.833	ENSKMAG00000002038	slirp	92	70.833	Kryptolebias_marmoratus
ENSHCOG00000006795	slirp	97	69.792	ENSLBEG00000007564	slirp	96	69.792	Labrus_bergylta
ENSHCOG00000006795	slirp	100	70.707	ENSLACG00000013434	SLIRP	95	70.707	Latimeria_chalumnae
ENSHCOG00000006795	slirp	89	56.818	ENSMFAG00000042960	SLIRP	79	59.740	Macaca_fascicularis
ENSHCOG00000006795	slirp	85	57.143	ENSMMUG00000029256	SLIRP	73	63.235	Macaca_mulatta
ENSHCOG00000006795	slirp	89	56.818	ENSMNEG00000028921	SLIRP	79	59.740	Macaca_nemestrina
ENSHCOG00000006795	slirp	69	63.235	ENSMLEG00000043644	SLIRP	68	64.179	Mandrillus_leucophaeus
ENSHCOG00000006795	slirp	95	80.851	ENSMZEG00005004617	slirp	95	80.851	Maylandia_zebra
ENSHCOG00000006795	slirp	90	50.000	ENSMAUG00000003857	Slirp	81	50.000	Mesocricetus_auratus
ENSHCOG00000006795	slirp	90	56.180	ENSMICG00000012080	SLIRP	80	56.180	Microcebus_murinus
ENSHCOG00000006795	slirp	90	51.685	ENSMOCG00000016019	Slirp	79	51.685	Microtus_ochrogaster
ENSHCOG00000006795	slirp	97	81.250	ENSMMOG00000018268	slirp	96	81.250	Mola_mola
ENSHCOG00000006795	slirp	71	55.714	ENSMODG00000005207	-	99	55.714	Monodelphis_domestica
ENSHCOG00000006795	slirp	95	72.340	ENSMALG00000012581	slirp	96	72.340	Monopterus_albus
ENSHCOG00000006795	slirp	88	52.273	MGP_CAROLIEiJ_G0017995	Slirp	81	52.273	Mus_caroli
ENSHCOG00000006795	slirp	88	53.409	ENSMUSG00000021040	Slirp	72	60.563	Mus_musculus
ENSHCOG00000006795	slirp	88	53.409	MGP_SPRETEiJ_G0018840	Slirp	79	53.409	Mus_spretus
ENSHCOG00000006795	slirp	97	51.042	ENSMLUG00000024998	-	86	51.020	Myotis_lucifugus
ENSHCOG00000006795	slirp	82	58.025	ENSMLUG00000029544	-	71	58.025	Myotis_lucifugus
ENSHCOG00000006795	slirp	78	54.545	ENSNGAG00000016363	Slirp	73	54.545	Nannospalax_galili
ENSHCOG00000006795	slirp	90	52.809	ENSNLEG00000032459	-	81	52.809	Nomascus_leucogenys
ENSHCOG00000006795	slirp	90	52.809	ENSNLEG00000027238	-	80	58.571	Nomascus_leucogenys
ENSHCOG00000006795	slirp	72	59.155	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSHCOG00000006795	slirp	95	79.787	ENSONIG00000011692	slirp	95	79.787	Oreochromis_niloticus
ENSHCOG00000006795	slirp	76	68.000	ENSOANG00000022366	SLIRP	68	68.000	Ornithorhynchus_anatinus
ENSHCOG00000006795	slirp	97	78.125	ENSORLG00000010761	slirp	74	78.125	Oryzias_latipes
ENSHCOG00000006795	slirp	97	79.167	ENSORLG00020022188	slirp	96	79.167	Oryzias_latipes_hni
ENSHCOG00000006795	slirp	96	78.947	ENSORLG00015020171	slirp	94	78.947	Oryzias_latipes_hsok
ENSHCOG00000006795	slirp	97	79.167	ENSOMEG00000019321	slirp	96	79.167	Oryzias_melastigma
ENSHCOG00000006795	slirp	90	55.056	ENSPPAG00000040710	-	73	63.235	Pan_paniscus
ENSHCOG00000006795	slirp	77	57.895	ENSPPRG00000014350	SLIRP	76	57.895	Panthera_pardus
ENSHCOG00000006795	slirp	77	57.895	ENSPTIG00000014196	SLIRP	76	57.895	Panthera_tigris_altaica
ENSHCOG00000006795	slirp	78	61.039	ENSPTRG00000030691	SLIRP	73	63.235	Pan_troglodytes
ENSHCOG00000006795	slirp	89	57.955	ENSPANG00000026323	SLIRP	80	57.955	Papio_anubis
ENSHCOG00000006795	slirp	72	67.606	ENSPKIG00000008831	slirp	70	67.606	Paramormyrops_kingsleyae
ENSHCOG00000006795	slirp	81	83.750	ENSPMGG00000010541	slirp	92	83.750	Periophthalmus_magnuspinnatus
ENSHCOG00000006795	slirp	73	61.111	ENSPEMG00000013234	Slirp	70	59.155	Peromyscus_maniculatus_bairdii
ENSHCOG00000006795	slirp	86	49.412	ENSPMAG00000009355	slirp	94	49.412	Petromyzon_marinus
ENSHCOG00000006795	slirp	80	51.899	ENSPCIG00000026842	-	85	51.899	Phascolarctos_cinereus
ENSHCOG00000006795	slirp	97	77.083	ENSPFOG00000006758	slirp	96	77.083	Poecilia_formosa
ENSHCOG00000006795	slirp	97	78.125	ENSPLAG00000011140	slirp	96	78.125	Poecilia_latipinna
ENSHCOG00000006795	slirp	97	77.083	ENSPMEG00000019535	slirp	96	77.083	Poecilia_mexicana
ENSHCOG00000006795	slirp	97	77.083	ENSPREG00000011673	slirp	96	77.083	Poecilia_reticulata
ENSHCOG00000006795	slirp	78	62.338	ENSPPYG00000006030	SLIRP	70	62.338	Pongo_abelii
ENSHCOG00000006795	slirp	78	58.442	ENSPCOG00000015159	SLIRP	68	61.644	Propithecus_coquereli
ENSHCOG00000006795	slirp	98	79.381	ENSPNAG00000008633	slirp	98	79.381	Pygocentrus_nattereri
ENSHCOG00000006795	slirp	88	58.621	ENSRBIG00000032222	-	80	58.621	Rhinopithecus_bieti
ENSHCOG00000006795	slirp	68	64.179	ENSRBIG00000032998	-	62	64.179	Rhinopithecus_bieti
ENSHCOG00000006795	slirp	66	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSHCOG00000006795	slirp	87	53.488	ENSRBIG00000035817	-	79	53.488	Rhinopithecus_bieti
ENSHCOG00000006795	slirp	66	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSHCOG00000006795	slirp	72	66.197	ENSRROG00000041312	-	70	66.197	Rhinopithecus_roxellana
ENSHCOG00000006795	slirp	88	58.621	ENSRROG00000036656	-	79	61.039	Rhinopithecus_roxellana
ENSHCOG00000006795	slirp	68	65.672	ENSRROG00000017133	-	70	65.672	Rhinopithecus_roxellana
ENSHCOG00000006795	slirp	77	63.158	ENSSBOG00000020014	SLIRP	80	63.158	Saimiri_boliviensis_boliviensis
ENSHCOG00000006795	slirp	98	61.856	ENSSFOG00015011165	slirp	98	61.856	Scleropages_formosus
ENSHCOG00000006795	slirp	97	50.000	ENSSMAG00000012930	slirp	96	50.000	Scophthalmus_maximus
ENSHCOG00000006795	slirp	97	80.208	ENSSDUG00000021883	slirp	63	80.208	Seriola_dumerili
ENSHCOG00000006795	slirp	97	80.208	ENSSLDG00000023136	slirp	87	80.208	Seriola_lalandi_dorsalis
ENSHCOG00000006795	slirp	92	64.835	ENSSPUG00000009346	SLIRP	91	64.835	Sphenodon_punctatus
ENSHCOG00000006795	slirp	96	72.632	ENSSPAG00000013477	slirp	95	72.632	Stegastes_partitus
ENSHCOG00000006795	slirp	90	51.111	ENSSSCG00000028167	SLIRP	81	51.111	Sus_scrofa
ENSHCOG00000006795	slirp	79	61.538	ENSTGUG00000012337	SLIRP	88	53.763	Taeniopygia_guttata
ENSHCOG00000006795	slirp	100	71.000	ENSTRUG00000020127	slirp	99	71.000	Takifugu_rubripes
ENSHCOG00000006795	slirp	78	59.740	ENSUAMG00000022445	SLIRP	68	59.740	Ursus_americanus
ENSHCOG00000006795	slirp	90	52.747	ENSUMAG00000007166	SLIRP	81	52.747	Ursus_maritimus
ENSHCOG00000006795	slirp	87	51.724	ENSVPAG00000001781	SLIRP	81	51.724	Vicugna_pacos
ENSHCOG00000006795	slirp	90	51.111	ENSVVUG00000004436	SLIRP	81	51.111	Vulpes_vulpes
ENSHCOG00000006795	slirp	82	71.605	ENSXETG00000030343	SLIRP	91	71.605	Xenopus_tropicalis
ENSHCOG00000006795	slirp	97	77.083	ENSXCOG00000009422	slirp	96	77.083	Xiphophorus_couchianus
ENSHCOG00000006795	slirp	97	79.167	ENSXMAG00000015655	slirp	96	79.167	Xiphophorus_maculatus