EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000006864 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6077 bases
Position: chrKV879836.1:1162109-1168185
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005232	RVT_1	PF00078.27	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005723	-	642	-	ENSHCOP00000005232	213 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000006864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000006864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000006864	-	62	57.252	ENSHCOG00000015689	-	55	57.252
ENSHCOG00000006864	-	75	56.250	ENSHCOG00000011588	-	78	56.250
ENSHCOG00000006864	-	73	98.710	ENSHCOG00000000129	-	76	98.710
ENSHCOG00000006864	-	75	56.250	ENSHCOG00000017691	-	78	56.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000006864	-	71	30.263	ENSCPBG00000010221	-	51	30.263	Chrysemys_picta_bellii
ENSHCOG00000006864	-	71	30.921	ENSCPBG00000001920	-	54	30.921	Chrysemys_picta_bellii
ENSHCOG00000006864	-	75	63.750	ENSEBUG00000004867	-	58	63.750	Eptatretus_burgeri
ENSHCOG00000006864	-	69	30.872	ENSMALG00000021355	-	59	30.872	Monopterus_albus
ENSHCOG00000006864	-	69	32.895	ENSORLG00015019882	-	61	32.895	Oryzias_latipes_hsok
ENSHCOG00000006864	-	69	30.137	ENSPSIG00000001566	-	53	30.137	Pelodiscus_sinensis
ENSHCOG00000006864	-	78	59.639	ENSSDUG00000004709	-	91	59.639	Seriola_dumerili
ENSHCOG00000006864	-	75	63.750	ENSSDUG00000021943	-	78	63.750	Seriola_dumerili
ENSHCOG00000006864	-	51	62.037	ENSSLDG00000018145	-	59	62.037	Seriola_lalandi_dorsalis