EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007100 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11145 bases
Position: chrKV880076.1:767041-778185
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005433	zf-C2H2	PF00096.26	1.1e-12	1	2
ENSHCOP00000005433	zf-C2H2	PF00096.26	1.1e-12	2	2
ENSHCOP00000005433	zf-met	PF12874.7	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005380	-	546	-	ENSHCOP00000005433	181 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007100	zgc:171929	67	46.753	ENSHCOG00000017437	-	54	46.835
ENSHCOG00000007100	zgc:171929	64	43.750	ENSHCOG00000001300	-	72	43.750
ENSHCOG00000007100	zgc:171929	71	42.188	ENSHCOG00000008028	-	81	42.188
ENSHCOG00000007100	zgc:171929	70	48.052	ENSHCOG00000020940	-	61	48.052
ENSHCOG00000007100	zgc:171929	68	40.260	ENSHCOG00000019001	-	63	40.260
ENSHCOG00000007100	zgc:171929	72	37.383	ENSHCOG00000019006	-	51	36.697
ENSHCOG00000007100	zgc:171929	68	40.260	ENSHCOG00000001318	-	79	38.961
ENSHCOG00000007100	zgc:171929	57	42.857	ENSHCOG00000007464	-	54	42.857
ENSHCOG00000007100	zgc:171929	65	39.744	ENSHCOG00000014781	-	52	39.744
ENSHCOG00000007100	zgc:171929	73	37.624	ENSHCOG00000000511	-	71	36.905
ENSHCOG00000007100	zgc:171929	73	40.260	ENSHCOG00000014850	-	60	40.260
ENSHCOG00000007100	zgc:171929	83	42.391	ENSHCOG00000001942	-	83	43.902
ENSHCOG00000007100	zgc:171929	71	43.902	ENSHCOG00000015241	-	61	43.902
ENSHCOG00000007100	zgc:171929	83	41.176	ENSHCOG00000014777	-	81	41.176
ENSHCOG00000007100	zgc:171929	78	43.750	ENSHCOG00000003041	-	76	40.449
ENSHCOG00000007100	zgc:171929	76	41.772	ENSHCOG00000001338	-	89	41.772
ENSHCOG00000007100	zgc:171929	69	38.356	ENSHCOG00000007664	-	94	36.000
ENSHCOG00000007100	zgc:171929	74	36.667	ENSHCOG00000000947	-	73	36.667
ENSHCOG00000007100	zgc:171929	67	41.053	ENSHCOG00000008205	-	71	41.053
ENSHCOG00000007100	zgc:171929	75	43.590	ENSHCOG00000014881	-	53	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007100	zgc:171929	76	83.942	ENSAPOG00000006365	zgc:171929	62	83.942	Acanthochromis_polyacanthus
ENSHCOG00000007100	zgc:171929	76	84.672	ENSAOCG00000010460	zgc:171929	57	84.672	Amphiprion_ocellaris
ENSHCOG00000007100	zgc:171929	78	61.702	ENSAPLG00000016199	OVOL2	79	61.702	Anas_platyrhynchos
ENSHCOG00000007100	zgc:171929	76	61.594	ENSCAFG00000005453	OVOL2	51	61.594	Canis_familiaris
ENSHCOG00000007100	zgc:171929	76	61.594	ENSCAFG00020027506	OVOL2	51	61.594	Canis_lupus_dingo
ENSHCOG00000007100	zgc:171929	76	61.594	ENSTSYG00000012790	OVOL2	69	61.594	Carlito_syrichta
ENSHCOG00000007100	zgc:171929	76	62.319	ENSCAPG00000005775	OVOL2	82	62.319	Cavia_aperea
ENSHCOG00000007100	zgc:171929	86	56.962	ENSCPBG00000023454	OVOL2	62	61.594	Chrysemys_picta_bellii
ENSHCOG00000007100	zgc:171929	76	60.870	ENSCANG00000033179	OVOL2	60	60.870	Colobus_angolensis_palliatus
ENSHCOG00000007100	zgc:171929	76	81.022	ENSCVAG00000001397	zgc:171929	50	81.022	Cyprinodon_variegatus
ENSHCOG00000007100	zgc:171929	81	58.503	ENSDORG00000016697	Ovol2	60	58.503	Dipodomys_ordii
ENSHCOG00000007100	zgc:171929	76	61.594	ENSEASG00005001990	OVOL2	50	61.594	Equus_asinus_asinus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSECAG00000007899	OVOL2	50	61.594	Equus_caballus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSFCAG00000027530	OVOL2	50	61.594	Felis_catus
ENSHCOG00000007100	zgc:171929	86	57.595	ENSFALG00000007594	OVOL2	58	57.595	Ficedula_albicollis
ENSHCOG00000007100	zgc:171929	76	62.319	ENSFDAG00000008730	OVOL2	82	62.319	Fukomys_damarensis
ENSHCOG00000007100	zgc:171929	76	62.319	ENSGALG00000008702	OVOL2	53	62.319	Gallus_gallus
ENSHCOG00000007100	zgc:171929	85	57.325	ENSGAGG00000020202	OVOL2	59	57.325	Gopherus_agassizii
ENSHCOG00000007100	zgc:171929	76	62.319	ENSHGLG00000016810	OVOL2	51	62.319	Heterocephalus_glaber_female
ENSHCOG00000007100	zgc:171929	76	60.870	ENSSTOG00000024979	OVOL2	50	60.870	Ictidomys_tridecemlineatus
ENSHCOG00000007100	zgc:171929	81	58.503	ENSJJAG00000014942	Ovol2	50	61.594	Jaculus_jaculus
ENSHCOG00000007100	zgc:171929	76	60.145	ENSLACG00000011247	OVOL2	52	60.145	Latimeria_chalumnae
ENSHCOG00000007100	zgc:171929	76	83.942	ENSMAMG00000021196	zgc:171929	57	83.942	Mastacembelus_armatus
ENSHCOG00000007100	zgc:171929	76	62.319	ENSMGAG00000006770	OVOL2	83	62.319	Meleagris_gallopavo
ENSHCOG00000007100	zgc:171929	76	61.594	ENSMICG00000032455	OVOL2	50	61.594	Microcebus_murinus
ENSHCOG00000007100	zgc:171929	83	56.954	ENSMODG00000005504	OVOL2	57	56.954	Monodelphis_domestica
ENSHCOG00000007100	zgc:171929	76	60.145	MGP_CAROLIEiJ_G0024381	Ovol2	57	60.145	Mus_caroli
ENSHCOG00000007100	zgc:171929	76	60.145	ENSMUSG00000037279	Ovol2	57	60.145	Mus_musculus
ENSHCOG00000007100	zgc:171929	76	60.145	MGP_PahariEiJ_G0025825	Ovol2	57	60.145	Mus_pahari
ENSHCOG00000007100	zgc:171929	76	60.145	MGP_SPRETEiJ_G0025300	Ovol2	57	60.145	Mus_spretus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSNGAG00000007174	Ovol2	57	61.594	Nannospalax_galili
ENSHCOG00000007100	zgc:171929	83	57.616	ENSMEUG00000011922	OVOL2	54	57.616	Notamacropus_eugenii
ENSHCOG00000007100	zgc:171929	73	86.364	ENSONIG00000004778	zgc:171929	52	86.364	Oreochromis_niloticus
ENSHCOG00000007100	zgc:171929	77	59.286	ENSOANG00000001250	OVOL2	82	59.286	Ornithorhynchus_anatinus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSOCUG00000012116	OVOL2	54	61.594	Oryctolagus_cuniculus
ENSHCOG00000007100	zgc:171929	73	86.364	ENSORLG00015015191	zgc:171929	52	86.364	Oryzias_latipes_hsok
ENSHCOG00000007100	zgc:171929	76	62.319	ENSOGAG00000030325	OVOL2	50	62.319	Otolemur_garnettii
ENSHCOG00000007100	zgc:171929	72	63.359	ENSPPAG00000032300	OVOL2	61	60.870	Pan_paniscus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSPPRG00000006276	OVOL2	50	61.594	Panthera_pardus
ENSHCOG00000007100	zgc:171929	87	56.250	ENSPSIG00000006768	OVOL2	68	56.250	Pelodiscus_sinensis
ENSHCOG00000007100	zgc:171929	76	81.752	ENSPMEG00000005347	zgc:171929	68	81.752	Poecilia_mexicana
ENSHCOG00000007100	zgc:171929	81	59.184	ENSPCOG00000013518	OVOL2	53	59.184	Propithecus_coquereli
ENSHCOG00000007100	zgc:171929	76	61.594	ENSPVAG00000001140	OVOL2	58	61.594	Pteropus_vampyrus
ENSHCOG00000007100	zgc:171929	83	57.616	ENSSHAG00000018466	OVOL2	53	57.616	Sarcophilus_harrisii
ENSHCOG00000007100	zgc:171929	82	76.351	ENSSMAG00000003204	zgc:171929	63	76.351	Scophthalmus_maximus
ENSHCOG00000007100	zgc:171929	76	61.594	ENSSARG00000006563	OVOL2	82	61.594	Sorex_araneus
ENSHCOG00000007100	zgc:171929	77	61.151	ENSSPUG00000001720	OVOL2	71	61.151	Sphenodon_punctatus
ENSHCOG00000007100	zgc:171929	76	83.212	ENSSPAG00000001700	zgc:171929	64	83.212	Stegastes_partitus
ENSHCOG00000007100	zgc:171929	81	59.184	ENSTGUG00000005909	OVOL2	56	59.184	Taeniopygia_guttata
ENSHCOG00000007100	zgc:171929	82	77.027	ENSXMAG00000022405	zgc:171929	71	77.027	Xiphophorus_maculatus