EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007147 (Gene tree)
Gene ID: 109516363
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4020 bases
Position: chrKV879956.1:1027895-1031914
Accession: 109516363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005463	RRM_1	PF00076.22	3.3e-10	1	1
ENSHCOP00000005451	RRM_1	PF00076.22	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005334	-	1830	XM_019870854	ENSHCOP00000005463	383 (aa)	XP_019726413	-
ENSHCOT00000005348	-	1227	-	ENSHCOP00000005451	408 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007147	nelfe	97	62.632	ENSG00000204356	NELFE	91	73.793	Homo_sapiens
ENSHCOG00000007147	nelfe	80	63.506	ENSBTAG00000007453	NELFE	99	48.042	Bos_taurus
ENSHCOG00000007147	nelfe	97	65.354	ENSTSYG00000012132	-	99	48.718	Carlito_syrichta
ENSHCOG00000007147	nelfe	95	60.858	ENSCAPG00000015145	NELFE	91	50.575	Cavia_aperea
ENSHCOG00000007147	nelfe	97	63.421	ENSCPOG00000031829	NELFE	99	53.141	Cavia_porcellus
ENSHCOG00000007147	nelfe	87	55.988	ENSCPBG00000000225	NELFE	84	69.595	Chrysemys_picta_bellii
ENSHCOG00000007147	nelfe	85	59.887	ENSEBUG00000017070	nelfe	96	65.101	Eptatretus_burgeri
ENSHCOG00000007147	nelfe	80	63.483	ENSECAG00000012274	NELFE	86	50.785	Equus_caballus
ENSHCOG00000007147	nelfe	59	75.309	ENSEEUG00000005004	NELFE	59	75.309	Erinaceus_europaeus
ENSHCOG00000007147	nelfe	88	64.474	ENSGALG00000045676	NELFE	90	69.173	Gallus_gallus
ENSHCOG00000007147	nelfe	97	81.769	ENSGACG00000002935	nelfe	100	81.501	Gasterosteus_aculeatus
ENSHCOG00000007147	nelfe	97	64.785	ENSLAFG00000028155	NELFE	87	74.483	Loxodonta_africana
ENSHCOG00000007147	nelfe	95	54.521	ENSMMUG00000041521	-	100	50.811	Macaca_mulatta
ENSHCOG00000007147	nelfe	85	52.478	ENSMGAG00000001297	NELFE	69	75.728	Meleagris_gallopavo
ENSHCOG00000007147	nelfe	71	73.103	ENSMODG00000015063	NELFE	90	69.182	Monodelphis_domestica
ENSHCOG00000007147	nelfe	80	62.360	ENSMPUG00000010581	NELFE	98	51.309	Mustela_putorius_furo
ENSHCOG00000007147	nelfe	80	63.848	ENSMLUG00000000622	-	90	58.407	Myotis_lucifugus
ENSHCOG00000007147	nelfe	97	65.160	ENSOPRG00000003942	NELFE	92	53.652	Ochotona_princeps
ENSHCOG00000007147	nelfe	98	74.933	ENSONIG00000013513	nelfe	98	74.468	Oreochromis_niloticus
ENSHCOG00000007147	nelfe	97	65.054	ENSPPAG00000039942	NELFE	99	50.785	Pan_paniscus
ENSHCOG00000007147	nelfe	97	64.785	ENSPTRG00000017996	NELFE	99	50.785	Pan_troglodytes
ENSHCOG00000007147	nelfe	97	65.054	ENSPPYG00000016471	NELFE	99	50.785	Pongo_abelii
ENSHCOG00000007147	nelfe	97	65.000	ENSRBIG00000028593	-	99	48.974	Rhinopithecus_bieti
ENSHCOG00000007147	nelfe	95	53.117	ENSRBIG00000028905	-	98	51.515	Rhinopithecus_bieti
ENSHCOG00000007147	nelfe	97	64.737	ENSRROG00000041993	NELFE	99	48.974	Rhinopithecus_roxellana
ENSHCOG00000007147	nelfe	80	62.857	ENSTTRG00000005923	NELFE	99	52.926	Tursiops_truncatus
ENSHCOG00000007147	nelfe	98	57.702	ENSXETG00000010931	nelfe	76	77.181	Xenopus_tropicalis