EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007177 (Gene tree)
Gene ID: 109515956
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1710 bases
Position: chrKV879952.1:2089884-2091593
Accession: 109515956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005498	RNase_H2_suC	PF08615.11	3.9e-18	1	1
ENSHCOP00000005503	RNase_H2_suC	PF08615.11	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005270	-	637	XM_019870118	ENSHCOP00000005498	136 (aa)	XP_019725677	UPI00094E3A94
ENSHCOT00000005275	-	474	-	ENSHCOP00000005503	157 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007177's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007177	rnaseh2c	100	81.618	ENSAPOG00000012901	rnaseh2c	99	81.618	Acanthochromis_polyacanthus
ENSHCOG00000007177	rnaseh2c	100	72.794	ENSACIG00000022433	rnaseh2c	100	72.794	Amphilophus_citrinellus
ENSHCOG00000007177	rnaseh2c	100	80.882	ENSAOCG00000016855	rnaseh2c	100	80.882	Amphiprion_ocellaris
ENSHCOG00000007177	rnaseh2c	100	81.618	ENSAPEG00000009850	rnaseh2c	100	81.618	Amphiprion_percula
ENSHCOG00000007177	rnaseh2c	100	80.147	ENSATEG00000014395	rnaseh2c	100	80.147	Anabas_testudineus
ENSHCOG00000007177	rnaseh2c	100	72.794	ENSACLG00000016950	rnaseh2c	100	72.794	Astatotilapia_calliptera
ENSHCOG00000007177	rnaseh2c	99	62.222	ENSAMXG00000001210	rnaseh2c	100	62.222	Astyanax_mexicanus
ENSHCOG00000007177	rnaseh2c	99	51.493	ENSCPBG00000023408	-	96	51.493	Chrysemys_picta_bellii
ENSHCOG00000007177	rnaseh2c	100	76.471	ENSCSEG00000005808	rnaseh2c	99	76.471	Cynoglossus_semilaevis
ENSHCOG00000007177	rnaseh2c	100	73.529	ENSCVAG00000006337	rnaseh2c	100	73.529	Cyprinodon_variegatus
ENSHCOG00000007177	rnaseh2c	100	64.706	ENSDARG00000089637	rnaseh2c	99	64.706	Danio_rerio
ENSHCOG00000007177	rnaseh2c	88	47.541	ENSEBUG00000014939	rnaseh2c	78	47.541	Eptatretus_burgeri
ENSHCOG00000007177	rnaseh2c	99	64.444	ENSELUG00000007345	rnaseh2c	97	64.444	Esox_lucius
ENSHCOG00000007177	rnaseh2c	96	71.538	ENSFHEG00000002419	rnaseh2c	98	70.149	Fundulus_heteroclitus
ENSHCOG00000007177	rnaseh2c	65	73.034	ENSGMOG00000008727	rnaseh2c	99	73.034	Gadus_morhua
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSGAFG00000016755	rnaseh2c	83	72.059	Gambusia_affinis
ENSHCOG00000007177	rnaseh2c	99	50.746	ENSGAGG00000008193	-	96	50.746	Gopherus_agassizii
ENSHCOG00000007177	rnaseh2c	100	75.000	ENSHBUG00000012806	rnaseh2c	100	75.000	Haplochromis_burtoni
ENSHCOG00000007177	rnaseh2c	100	61.029	ENSIPUG00000018044	rnaseh2c	100	61.029	Ictalurus_punctatus
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSKMAG00000004184	rnaseh2c	100	72.059	Kryptolebias_marmoratus
ENSHCOG00000007177	rnaseh2c	100	75.182	ENSLBEG00000005742	rnaseh2c	100	75.182	Labrus_bergylta
ENSHCOG00000007177	rnaseh2c	95	56.589	ENSLACG00000010120	-	92	57.252	Latimeria_chalumnae
ENSHCOG00000007177	rnaseh2c	100	75.000	ENSMAMG00000021610	rnaseh2c	100	75.000	Mastacembelus_armatus
ENSHCOG00000007177	rnaseh2c	100	73.529	ENSMZEG00005004796	rnaseh2c	100	73.529	Maylandia_zebra
ENSHCOG00000007177	rnaseh2c	100	75.735	ENSMMOG00000002869	rnaseh2c	100	75.735	Mola_mola
ENSHCOG00000007177	rnaseh2c	100	77.372	ENSMALG00000012198	rnaseh2c	100	77.372	Monopterus_albus
ENSHCOG00000007177	rnaseh2c	100	75.000	ENSNBRG00000001462	rnaseh2c	100	75.000	Neolamprologus_brichardi
ENSHCOG00000007177	rnaseh2c	100	74.265	ENSONIG00000005338	rnaseh2c	99	74.265	Oreochromis_niloticus
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSORLG00000023473	rnaseh2c	100	72.059	Oryzias_latipes
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSORLG00020019053	rnaseh2c	91	72.059	Oryzias_latipes_hni
ENSHCOG00000007177	rnaseh2c	100	72.794	ENSORLG00015017067	rnaseh2c	91	72.794	Oryzias_latipes_hsok
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSOMEG00000018607	rnaseh2c	100	72.059	Oryzias_melastigma
ENSHCOG00000007177	rnaseh2c	100	57.353	ENSPKIG00000019331	rnaseh2c	100	57.353	Paramormyrops_kingsleyae
ENSHCOG00000007177	rnaseh2c	100	69.118	ENSPFOG00000009415	rnaseh2c	100	69.118	Poecilia_formosa
ENSHCOG00000007177	rnaseh2c	100	69.853	ENSPLAG00000023330	rnaseh2c	100	69.853	Poecilia_latipinna
ENSHCOG00000007177	rnaseh2c	100	69.853	ENSPMEG00000003696	rnaseh2c	100	69.853	Poecilia_mexicana
ENSHCOG00000007177	rnaseh2c	100	65.986	ENSPREG00000015384	rnaseh2c	73	65.986	Poecilia_reticulata
ENSHCOG00000007177	rnaseh2c	100	75.000	ENSPNYG00000014766	rnaseh2c	100	75.000	Pundamilia_nyererei
ENSHCOG00000007177	rnaseh2c	99	60.741	ENSPNAG00000019111	rnaseh2c	99	60.741	Pygocentrus_nattereri
ENSHCOG00000007177	rnaseh2c	99	62.963	ENSSFOG00015005760	rnaseh2c	99	62.963	Scleropages_formosus
ENSHCOG00000007177	rnaseh2c	100	80.147	ENSSMAG00000017738	rnaseh2c	100	80.147	Scophthalmus_maximus
ENSHCOG00000007177	rnaseh2c	100	80.882	ENSSDUG00000017285	rnaseh2c	100	80.882	Seriola_dumerili
ENSHCOG00000007177	rnaseh2c	100	82.353	ENSSLDG00000016030	rnaseh2c	100	82.353	Seriola_lalandi_dorsalis
ENSHCOG00000007177	rnaseh2c	96	46.617	ENSSPUG00000000842	-	88	46.269	Sphenodon_punctatus
ENSHCOG00000007177	rnaseh2c	100	76.471	ENSSPAG00000007536	rnaseh2c	100	76.471	Stegastes_partitus
ENSHCOG00000007177	rnaseh2c	100	70.588	ENSTRUG00000021845	rnaseh2c	100	70.588	Takifugu_rubripes
ENSHCOG00000007177	rnaseh2c	100	76.471	ENSTNIG00000000431	rnaseh2c	100	76.471	Tetraodon_nigroviridis
ENSHCOG00000007177	rnaseh2c	99	50.000	ENSXETG00000032466	-	98	50.000	Xenopus_tropicalis
ENSHCOG00000007177	rnaseh2c	100	72.059	ENSXCOG00000001611	rnaseh2c	100	72.059	Xiphophorus_couchianus
ENSHCOG00000007177	rnaseh2c	100	73.529	ENSXMAG00000003147	rnaseh2c	83	73.529	Xiphophorus_maculatus