EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007180 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1950 bases
Position: chrKV880218.1:3549084-3551033
Accession: 109524309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005511	RRM_1	PF00076.22	8.5e-31	1	2
ENSHCOP00000005511	RRM_1	PF00076.22	8.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005251	-	1743	XM_019884090	ENSHCOP00000005511	236 (aa)	XP_019739649	-

Gene Model

Click here to download ENSHCOG00000007180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007180	-	64	42.105	ENSHCOG00000001170	cirbpa	67	41.250
ENSHCOG00000007180	-	69	41.250	ENSHCOG00000019356	rbm24a	90	39.286
ENSHCOG00000007180	-	91	36.232	ENSHCOG00000012019	MSI1	61	37.791
ENSHCOG00000007180	-	87	36.364	ENSHCOG00000000087	hnrnpd	62	36.257
ENSHCOG00000007180	-	79	31.132	ENSHCOG00000002224	tardbp	56	31.373
ENSHCOG00000007180	-	72	34.706	ENSHCOG00000009363	-	51	34.706
ENSHCOG00000007180	-	98	32.468	ENSHCOG00000012067	-	87	32.836
ENSHCOG00000007180	-	76	45.631	ENSHCOG00000019526	hnrnpa1b	68	45.960
ENSHCOG00000007180	-	84	47.170	ENSHCOG00000000313	HNRNPA3	53	50.289
ENSHCOG00000007180	-	75	63.905	ENSHCOG00000007174	HNRNPA0	94	63.905
ENSHCOG00000007180	-	72	38.235	ENSHCOG00000015341	hnrnpaba	61	38.235
ENSHCOG00000007180	-	99	35.685	ENSHCOG00000000266	msi2a	52	37.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007180	-	76	80.447	ENSAOCG00000015914	-	64	80.447	Amphiprion_ocellaris
ENSHCOG00000007180	-	75	67.081	ENSAOCG00000015951	-	96	67.081	Amphiprion_ocellaris
ENSHCOG00000007180	-	75	67.081	ENSAPEG00000002274	-	96	67.081	Amphiprion_percula
ENSHCOG00000007180	-	76	80.447	ENSAPEG00000002224	-	75	80.447	Amphiprion_percula
ENSHCOG00000007180	-	76	78.771	ENSACLG00000008978	-	82	78.771	Astatotilapia_calliptera
ENSHCOG00000007180	-	76	76.536	ENSCVAG00000008324	-	77	76.536	Cyprinodon_variegatus
ENSHCOG00000007180	-	75	36.957	ENSEBUG00000010003	-	92	36.095	Eptatretus_burgeri
ENSHCOG00000007180	-	75	69.512	ENSELUG00000014407	-	97	69.512	Esox_lucius
ENSHCOG00000007180	-	76	78.771	ENSHBUG00000023867	-	82	78.771	Haplochromis_burtoni
ENSHCOG00000007180	-	75	80.723	ENSLBEG00000006362	-	79	80.723	Labrus_bergylta
ENSHCOG00000007180	-	69	70.536	ENSLOCG00000012121	-	61	70.536	Lepisosteus_oculatus
ENSHCOG00000007180	-	76	78.771	ENSMAMG00000017728	-	68	78.771	Mastacembelus_armatus
ENSHCOG00000007180	-	76	78.771	ENSMZEG00005001063	-	81	78.771	Maylandia_zebra
ENSHCOG00000007180	-	75	67.901	ENSMMOG00000004242	-	98	67.901	Mola_mola
ENSHCOG00000007180	-	98	38.793	ENSMEUG00000003051	-	57	41.808	Notamacropus_eugenii
ENSHCOG00000007180	-	77	58.523	ENSORLG00000023542	-	62	59.649	Oryzias_latipes
ENSHCOG00000007180	-	76	57.627	ENSORLG00000023176	-	57	58.382	Oryzias_latipes
ENSHCOG00000007180	-	87	51.220	ENSORLG00000030284	-	63	53.077	Oryzias_latipes
ENSHCOG00000007180	-	75	57.143	ENSORLG00020007084	-	74	57.143	Oryzias_latipes_hni
ENSHCOG00000007180	-	75	79.310	ENSORLG00020007171	-	97	79.310	Oryzias_latipes_hni
ENSHCOG00000007180	-	73	59.281	ENSORLG00020006029	-	60	57.558	Oryzias_latipes_hni
ENSHCOG00000007180	-	100	50.655	ENSOMEG00000023475	-	69	55.556	Oryzias_melastigma
ENSHCOG00000007180	-	95	50.439	ENSOMEG00000006903	-	67	55.000	Oryzias_melastigma
ENSHCOG00000007180	-	100	50.917	ENSOMEG00000021030	-	67	57.471	Oryzias_melastigma
ENSHCOG00000007180	-	77	57.923	ENSOMEG00000002000	-	62	58.333	Oryzias_melastigma
ENSHCOG00000007180	-	86	44.604	ENSOMEG00000002084	-	79	50.000	Oryzias_melastigma
ENSHCOG00000007180	-	97	49.174	ENSOMEG00000012368	-	69	55.556	Oryzias_melastigma
ENSHCOG00000007180	-	75	53.012	ENSOMEG00000009566	-	87	53.012	Oryzias_melastigma
ENSHCOG00000007180	-	74	44.068	ENSOMEG00000006327	-	60	44.000	Oryzias_melastigma
ENSHCOG00000007180	-	100	55.676	ENSOMEG00000002509	-	76	55.556	Oryzias_melastigma
ENSHCOG00000007180	-	76	76.536	ENSPREG00000010603	-	59	76.536	Poecilia_reticulata
ENSHCOG00000007180	-	76	78.771	ENSPNYG00000020763	-	82	78.771	Pundamilia_nyererei
ENSHCOG00000007180	-	72	69.182	ENSPNAG00000018051	-	83	69.182	Pygocentrus_nattereri
ENSHCOG00000007180	-	74	58.046	ENSSHAG00000015609	-	79	58.046	Sarcophilus_harrisii
ENSHCOG00000007180	-	75	78.313	ENSSDUG00000002394	-	87	78.313	Seriola_dumerili
ENSHCOG00000007180	-	73	67.550	ENSSLDG00000024685	-	88	68.000	Seriola_lalandi_dorsalis