EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007191 (Gene tree)
Gene ID: 109516359
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10643 bases
Position: chrKV879956.1:1017620-1028262
Accession: 109516359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005481	rRNA_proc-arch	PF13234.6	3.6e-29	1	1
ENSHCOP00000005481	DEAD	PF00270.29	8.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005289	-	3450	XM_019870846	ENSHCOP00000005481	1149 (aa)	XP_019726405	-

Gene Model

Click here to download ENSHCOG00000007191's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007191	skiv2l	81	34.778	ENSHCOG00000019995	mtrex	97	34.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007191	skiv2l	100	59.398	ENSG00000204351	SKIV2L	98	59.551	Homo_sapiens
ENSHCOG00000007191	skiv2l	100	81.959	ENSAPOG00000008257	skiv2l	98	81.515	Acanthochromis_polyacanthus
ENSHCOG00000007191	skiv2l	100	59.561	ENSAMEG00000002078	SKIV2L	98	59.642	Ailuropoda_melanoleuca
ENSHCOG00000007191	skiv2l	100	79.984	ENSACIG00000016719	skiv2l	99	79.657	Amphilophus_citrinellus
ENSHCOG00000007191	skiv2l	100	82.449	ENSAOCG00000017352	skiv2l	98	82.204	Amphiprion_ocellaris
ENSHCOG00000007191	skiv2l	100	82.367	ENSAPEG00000001055	skiv2l	98	82.122	Amphiprion_percula
ENSHCOG00000007191	skiv2l	100	81.811	ENSATEG00000007601	skiv2l	98	81.485	Anabas_testudineus
ENSHCOG00000007191	skiv2l	97	67.762	ENSACAG00000011746	SKIV2L	98	60.080	Anolis_carolinensis
ENSHCOG00000007191	skiv2l	100	60.262	ENSANAG00000037992	SKIV2L	98	60.262	Aotus_nancymaae
ENSHCOG00000007191	skiv2l	100	82.898	ENSACLG00000006886	skiv2l	98	82.799	Astatotilapia_calliptera
ENSHCOG00000007191	skiv2l	100	74.614	ENSAMXG00000011517	skiv2l	98	74.776	Astyanax_mexicanus
ENSHCOG00000007191	skiv2l	100	59.805	ENSBTAG00000005587	SKIV2L	98	59.886	Bos_taurus
ENSHCOG00000007191	skiv2l	83	44.971	WBGene00008502	skih-2	80	45.029	Caenorhabditis_elegans
ENSHCOG00000007191	skiv2l	100	59.561	ENSCJAG00000002263	SKIV2L	98	59.561	Callithrix_jacchus
ENSHCOG00000007191	skiv2l	100	59.561	ENSCAFG00000000679	SKIV2L	98	59.561	Canis_familiaris
ENSHCOG00000007191	skiv2l	100	59.561	ENSCAFG00020000948	SKIV2L	98	59.561	Canis_lupus_dingo
ENSHCOG00000007191	skiv2l	100	60.130	ENSCHIG00000012897	SKIV2L	98	60.212	Capra_hircus
ENSHCOG00000007191	skiv2l	100	59.350	ENSTSYG00000012133	SKIV2L	98	59.350	Carlito_syrichta
ENSHCOG00000007191	skiv2l	100	59.918	ENSCPOG00000001307	SKIV2L	98	59.820	Cavia_porcellus
ENSHCOG00000007191	skiv2l	100	60.244	ENSCCAG00000026206	SKIV2L	98	60.244	Cebus_capucinus
ENSHCOG00000007191	skiv2l	100	59.723	ENSCATG00000036901	SKIV2L	98	59.723	Cercocebus_atys
ENSHCOG00000007191	skiv2l	100	59.723	ENSCLAG00000007678	SKIV2L	98	59.886	Chinchilla_lanigera
ENSHCOG00000007191	skiv2l	100	59.967	ENSCSAG00000008988	SKIV2L	98	59.967	Chlorocebus_sabaeus
ENSHCOG00000007191	skiv2l	85	68.513	ENSCPBG00000000343	SKIV2L	95	60.187	Chrysemys_picta_bellii
ENSHCOG00000007191	skiv2l	94	49.784	ENSCING00000005576	-	99	49.784	Ciona_intestinalis
ENSHCOG00000007191	skiv2l	100	59.886	ENSCANG00000039709	SKIV2L	99	59.675	Colobus_angolensis_palliatus
ENSHCOG00000007191	skiv2l	100	59.902	ENSCGRG00001008385	Skiv2l	98	59.739	Cricetulus_griseus_chok1gshd
ENSHCOG00000007191	skiv2l	100	81.121	ENSCSEG00000011326	skiv2l	98	81.121	Cynoglossus_semilaevis
ENSHCOG00000007191	skiv2l	100	85.000	ENSCVAG00000003072	skiv2l	98	85.000	Cyprinodon_variegatus
ENSHCOG00000007191	skiv2l	100	77.417	ENSDARG00000062206	skiv2l	98	77.417	Danio_rerio
ENSHCOG00000007191	skiv2l	100	56.367	ENSDNOG00000037590	SKIV2L	98	56.807	Dasypus_novemcinctus
ENSHCOG00000007191	skiv2l	95	45.123	FBgn0039117	tst	97	45.208	Drosophila_melanogaster
ENSHCOG00000007191	skiv2l	73	70.886	ENSETEG00000009522	SKIV2L	69	70.886	Echinops_telfairi
ENSHCOG00000007191	skiv2l	87	61.327	ENSEBUG00000013680	-	88	60.245	Eptatretus_burgeri
ENSHCOG00000007191	skiv2l	90	66.494	ENSEASG00005015534	SKIV2L	99	60.794	Equus_asinus_asinus
ENSHCOG00000007191	skiv2l	91	66.927	ENSECAG00000021823	SKIV2L	94	59.587	Equus_caballus
ENSHCOG00000007191	skiv2l	56	73.518	ENSEEUG00000005049	SKIV2L	57	73.518	Erinaceus_europaeus
ENSHCOG00000007191	skiv2l	100	81.014	ENSELUG00000000181	skiv2l	97	81.014	Esox_lucius
ENSHCOG00000007191	skiv2l	100	59.479	ENSFCAG00000004519	SKIV2L	98	59.886	Felis_catus
ENSHCOG00000007191	skiv2l	96	65.560	ENSFDAG00000009438	SKIV2L	98	58.828	Fukomys_damarensis
ENSHCOG00000007191	skiv2l	100	83.475	ENSFHEG00000008853	skiv2l	98	83.475	Fundulus_heteroclitus
ENSHCOG00000007191	skiv2l	99	77.805	ENSGMOG00000005926	skiv2l	98	77.805	Gadus_morhua
ENSHCOG00000007191	skiv2l	82	56.712	ENSGALG00000035499	SKIV2L	98	56.495	Gallus_gallus
ENSHCOG00000007191	skiv2l	100	81.648	ENSGAFG00000002382	skiv2l	98	81.648	Gambusia_affinis
ENSHCOG00000007191	skiv2l	100	81.491	ENSGACG00000002927	skiv2l	98	81.654	Gasterosteus_aculeatus
ENSHCOG00000007191	skiv2l	100	59.561	ENSGGOG00000002270	SKIV2L	98	59.642	Gorilla_gorilla
ENSHCOG00000007191	skiv2l	100	82.271	ENSHBUG00000000726	skiv2l	98	82.025	Haplochromis_burtoni
ENSHCOG00000007191	skiv2l	100	59.561	ENSHGLG00000016596	SKIV2L	98	59.479	Heterocephalus_glaber_female
ENSHCOG00000007191	skiv2l	100	57.933	ENSHGLG00100014161	SKIV2L	98	57.852	Heterocephalus_glaber_male
ENSHCOG00000007191	skiv2l	100	75.814	ENSIPUG00000016263	skiv2l	100	75.651	Ictalurus_punctatus
ENSHCOG00000007191	skiv2l	100	59.561	ENSSTOG00000014596	SKIV2L	98	59.642	Ictidomys_tridecemlineatus
ENSHCOG00000007191	skiv2l	53	59.524	ENSLACG00000002986	-	58	59.524	Latimeria_chalumnae
ENSHCOG00000007191	skiv2l	100	59.561	ENSLAFG00000014231	SKIV2L	98	59.642	Loxodonta_africana
ENSHCOG00000007191	skiv2l	100	59.967	ENSMFAG00000034235	SKIV2L	98	59.967	Macaca_fascicularis
ENSHCOG00000007191	skiv2l	100	59.967	ENSMMUG00000000736	SKIV2L	98	59.967	Macaca_mulatta
ENSHCOG00000007191	skiv2l	100	59.886	ENSMNEG00000044474	SKIV2L	98	59.886	Macaca_nemestrina
ENSHCOG00000007191	skiv2l	100	59.805	ENSMLEG00000030512	SKIV2L	98	59.805	Mandrillus_leucophaeus
ENSHCOG00000007191	skiv2l	100	86.022	ENSMAMG00000002927	skiv2l	98	86.022	Mastacembelus_armatus
ENSHCOG00000007191	skiv2l	100	82.898	ENSMZEG00005026415	skiv2l	98	82.799	Maylandia_zebra
ENSHCOG00000007191	skiv2l	100	59.528	ENSMAUG00000018613	Skiv2l	98	59.691	Mesocricetus_auratus
ENSHCOG00000007191	skiv2l	100	59.642	ENSMICG00000046331	SKIV2L	98	59.886	Microcebus_murinus
ENSHCOG00000007191	skiv2l	100	58.517	ENSMOCG00000014240	Skiv2l	98	58.354	Microtus_ochrogaster
ENSHCOG00000007191	skiv2l	100	85.702	ENSMMOG00000014547	skiv2l	98	85.702	Mola_mola
ENSHCOG00000007191	skiv2l	97	67.081	ENSMODG00000015052	SKIV2L	98	59.561	Monodelphis_domestica
ENSHCOG00000007191	skiv2l	100	79.385	ENSMALG00000010535	skiv2l	98	79.551	Monopterus_albus
ENSHCOG00000007191	skiv2l	100	59.413	MGP_CAROLIEiJ_G0021477	Skiv2l	98	59.332	Mus_caroli
ENSHCOG00000007191	skiv2l	100	59.495	ENSMUSG00000040356	Skiv2l	98	59.495	Mus_musculus
ENSHCOG00000007191	skiv2l	100	59.739	MGP_PahariEiJ_G0020472	Skiv2l	98	59.739	Mus_pahari
ENSHCOG00000007191	skiv2l	100	59.332	MGP_SPRETEiJ_G0022382	Skiv2l	98	59.332	Mus_spretus
ENSHCOG00000007191	skiv2l	100	59.154	ENSMLUG00000000628	SKIV2L	98	59.154	Myotis_lucifugus
ENSHCOG00000007191	skiv2l	100	82.955	ENSNBRG00000018650	skiv2l	98	82.620	Neolamprologus_brichardi
ENSHCOG00000007191	skiv2l	100	59.020	ENSNLEG00000006451	SKIV2L	99	58.776	Nomascus_leucogenys
ENSHCOG00000007191	skiv2l	73	68.126	ENSMEUG00000006072	SKIV2L	76	64.602	Notamacropus_eugenii
ENSHCOG00000007191	skiv2l	100	59.317	ENSOPRG00000003972	SKIV2L	98	59.479	Ochotona_princeps
ENSHCOG00000007191	skiv2l	100	59.235	ENSODEG00000017516	SKIV2L	98	59.317	Octodon_degus
ENSHCOG00000007191	skiv2l	100	82.300	ENSONIG00000013500	skiv2l	98	81.974	Oreochromis_niloticus
ENSHCOG00000007191	skiv2l	100	59.642	ENSOCUG00000007019	SKIV2L	98	59.805	Oryctolagus_cuniculus
ENSHCOG00000007191	skiv2l	100	80.619	ENSORLG00000002021	skiv2l	98	80.619	Oryzias_latipes
ENSHCOG00000007191	skiv2l	100	80.456	ENSORLG00020009462	skiv2l	98	80.456	Oryzias_latipes_hni
ENSHCOG00000007191	skiv2l	100	80.456	ENSORLG00015016750	skiv2l	98	80.456	Oryzias_latipes_hsok
ENSHCOG00000007191	skiv2l	100	80.816	ENSOMEG00000008531	skiv2l	98	80.735	Oryzias_melastigma
ENSHCOG00000007191	skiv2l	100	59.723	ENSOGAG00000009578	SKIV2L	98	59.723	Otolemur_garnettii
ENSHCOG00000007191	skiv2l	100	56.349	ENSOARG00000002411	-	98	56.429	Ovis_aries
ENSHCOG00000007191	skiv2l	100	59.223	ENSPPAG00000040211	SKIV2L	99	59.223	Pan_paniscus
ENSHCOG00000007191	skiv2l	100	59.642	ENSPPRG00000005017	SKIV2L	98	60.049	Panthera_pardus
ENSHCOG00000007191	skiv2l	100	59.235	ENSPTIG00000021656	SKIV2L	98	59.642	Panthera_tigris_altaica
ENSHCOG00000007191	skiv2l	100	59.642	ENSPTRG00000017997	SKIV2L	98	59.642	Pan_troglodytes
ENSHCOG00000007191	skiv2l	100	59.187	ENSPANG00000011501	SKIV2L	99	59.187	Papio_anubis
ENSHCOG00000007191	skiv2l	100	74.087	ENSPKIG00000011876	skiv2l	98	73.917	Paramormyrops_kingsleyae
ENSHCOG00000007191	skiv2l	100	82.161	ENSPMGG00000019707	skiv2l	98	81.826	Periophthalmus_magnuspinnatus
ENSHCOG00000007191	skiv2l	100	59.658	ENSPEMG00000019001	Skiv2l	98	59.576	Peromyscus_maniculatus_bairdii
ENSHCOG00000007191	skiv2l	100	59.268	ENSPCIG00000018792	SKIV2L	98	59.350	Phascolarctos_cinereus
ENSHCOG00000007191	skiv2l	100	81.403	ENSPFOG00000002424	skiv2l	98	81.403	Poecilia_formosa
ENSHCOG00000007191	skiv2l	100	81.321	ENSPLAG00000018304	skiv2l	98	81.321	Poecilia_latipinna
ENSHCOG00000007191	skiv2l	100	81.485	ENSPMEG00000006997	skiv2l	98	81.485	Poecilia_mexicana
ENSHCOG00000007191	skiv2l	100	84.346	ENSPREG00000002277	skiv2l	98	84.346	Poecilia_reticulata
ENSHCOG00000007191	skiv2l	100	59.235	ENSPPYG00000016472	SKIV2L	98	59.235	Pongo_abelii
ENSHCOG00000007191	skiv2l	79	75.000	ENSPCAG00000004178	SKIV2L	75	75.000	Procavia_capensis
ENSHCOG00000007191	skiv2l	100	59.642	ENSPCOG00000010308	SKIV2L	98	59.740	Propithecus_coquereli
ENSHCOG00000007191	skiv2l	100	60.130	ENSPVAG00000005136	SKIV2L	98	60.130	Pteropus_vampyrus
ENSHCOG00000007191	skiv2l	100	83.788	ENSPNYG00000017853	skiv2l	98	83.447	Pundamilia_nyererei
ENSHCOG00000007191	skiv2l	100	76.346	ENSPNAG00000011823	skiv2l	98	76.264	Pygocentrus_nattereri
ENSHCOG00000007191	skiv2l	100	60.065	ENSRNOG00000000421	Skiv2l	98	59.902	Rattus_norvegicus
ENSHCOG00000007191	skiv2l	100	58.785	ENSRBIG00000035485	SKIV2L	98	58.866	Rhinopithecus_bieti
ENSHCOG00000007191	skiv2l	100	59.886	ENSRROG00000036429	SKIV2L	98	59.967	Rhinopithecus_roxellana
ENSHCOG00000007191	skiv2l	82	41.813	YLR398C	-	77	41.426	Saccharomyces_cerevisiae
ENSHCOG00000007191	skiv2l	100	59.967	ENSSBOG00000027920	SKIV2L	98	59.967	Saimiri_boliviensis_boliviensis
ENSHCOG00000007191	skiv2l	96	66.908	ENSSHAG00000008963	SKIV2L	98	58.211	Sarcophilus_harrisii
ENSHCOG00000007191	skiv2l	98	79.692	ENSSFOG00015016930	skiv2l	98	79.454	Scleropages_formosus
ENSHCOG00000007191	skiv2l	100	81.974	ENSSMAG00000020185	skiv2l	99	81.974	Scophthalmus_maximus
ENSHCOG00000007191	skiv2l	100	85.959	ENSSDUG00000019977	skiv2l	98	85.959	Seriola_dumerili
ENSHCOG00000007191	skiv2l	100	83.405	ENSSLDG00000024382	skiv2l	98	83.148	Seriola_lalandi_dorsalis
ENSHCOG00000007191	skiv2l	97	64.147	ENSSPUG00000012945	SKIV2L	98	56.574	Sphenodon_punctatus
ENSHCOG00000007191	skiv2l	94	81.277	ENSSPAG00000012904	skiv2l	98	81.277	Stegastes_partitus
ENSHCOG00000007191	skiv2l	100	59.561	ENSSSCG00000001424	SKIV2L	98	59.723	Sus_scrofa
ENSHCOG00000007191	skiv2l	75	81.297	ENSTRUG00000000966	skiv2l	100	70.805	Takifugu_rubripes
ENSHCOG00000007191	skiv2l	100	79.590	ENSTNIG00000004382	skiv2l	98	79.590	Tetraodon_nigroviridis
ENSHCOG00000007191	skiv2l	94	62.086	ENSTBEG00000003462	SKIV2L	92	61.963	Tupaia_belangeri
ENSHCOG00000007191	skiv2l	100	56.225	ENSTTRG00000005931	SKIV2L	98	56.306	Tursiops_truncatus
ENSHCOG00000007191	skiv2l	100	59.642	ENSUAMG00000024336	SKIV2L	98	59.723	Ursus_americanus
ENSHCOG00000007191	skiv2l	94	60.708	ENSUMAG00000012666	SKIV2L	99	60.794	Ursus_maritimus
ENSHCOG00000007191	skiv2l	100	59.561	ENSVVUG00000022807	SKIV2L	98	59.561	Vulpes_vulpes
ENSHCOG00000007191	skiv2l	100	56.772	ENSXETG00000010932	skiv2l	98	56.772	Xenopus_tropicalis
ENSHCOG00000007191	skiv2l	100	81.826	ENSXCOG00000019517	skiv2l	96	81.826	Xiphophorus_couchianus
ENSHCOG00000007191	skiv2l	100	81.796	ENSXMAG00000014079	skiv2l	98	81.796	Xiphophorus_maculatus