EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007221 (Gene tree)
Gene ID: 109532662
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 7018 bases
Position: chrKV880455.1:12714-19731
Accession: 109532662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005534	Xpo1	PF08389.12	3.8e-26	1	1
ENSHCOP00000005506	Xpo1	PF08389.12	2.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005222	-	3378	XM_019897614	ENSHCOP00000005534	923 (aa)	XP_019753173	UPI00094E803B
ENSHCOT00000005254	-	1401	-	ENSHCOP00000005506	466 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007221	tnpo3	100	85.265	ENSG00000064419	TNPO3	100	85.414	Homo_sapiens
ENSHCOG00000007221	tnpo3	100	93.608	ENSAPOG00000018347	tnpo3	100	93.608	Acanthochromis_polyacanthus
ENSHCOG00000007221	tnpo3	99	82.143	ENSAMEG00000005135	TNPO3	98	82.143	Ailuropoda_melanoleuca
ENSHCOG00000007221	tnpo3	96	89.663	ENSACIG00000005897	tnpo3	100	89.663	Amphilophus_citrinellus
ENSHCOG00000007221	tnpo3	100	93.824	ENSAOCG00000008264	tnpo3	100	93.824	Amphiprion_ocellaris
ENSHCOG00000007221	tnpo3	96	93.884	ENSAPEG00000024300	tnpo3	100	93.884	Amphiprion_percula
ENSHCOG00000007221	tnpo3	100	92.308	ENSATEG00000003197	tnpo3	100	92.308	Anabas_testudineus
ENSHCOG00000007221	tnpo3	84	79.082	ENSAPLG00000005946	TNPO3	91	82.131	Anas_platyrhynchos
ENSHCOG00000007221	tnpo3	88	81.553	ENSACAG00000013470	TNPO3	95	84.211	Anolis_carolinensis
ENSHCOG00000007221	tnpo3	100	85.049	ENSANAG00000037940	TNPO3	100	85.049	Aotus_nancymaae
ENSHCOG00000007221	tnpo3	100	92.741	ENSACLG00000005561	tnpo3	100	92.741	Astatotilapia_calliptera
ENSHCOG00000007221	tnpo3	100	90.683	ENSAMXG00000016236	tnpo3	100	90.683	Astyanax_mexicanus
ENSHCOG00000007221	tnpo3	100	85.049	ENSBTAG00000004992	TNPO3	100	85.181	Bos_taurus
ENSHCOG00000007221	tnpo3	100	85.157	ENSCJAG00000018085	TNPO3	100	85.157	Callithrix_jacchus
ENSHCOG00000007221	tnpo3	100	85.265	ENSCAFG00000001543	TNPO3	100	85.265	Canis_familiaris
ENSHCOG00000007221	tnpo3	100	85.265	ENSCAFG00020022462	TNPO3	99	84.881	Canis_lupus_dingo
ENSHCOG00000007221	tnpo3	100	85.157	ENSCHIG00000011721	TNPO3	100	85.157	Capra_hircus
ENSHCOG00000007221	tnpo3	100	85.374	ENSTSYG00000002989	TNPO3	100	85.374	Carlito_syrichta
ENSHCOG00000007221	tnpo3	72	83.696	ENSCAPG00000005843	TNPO3	91	83.696	Cavia_aperea
ENSHCOG00000007221	tnpo3	100	84.940	ENSCPOG00000039784	TNPO3	100	84.940	Cavia_porcellus
ENSHCOG00000007221	tnpo3	100	85.157	ENSCCAG00000033826	TNPO3	100	85.298	Cebus_capucinus
ENSHCOG00000007221	tnpo3	100	85.265	ENSCATG00000030018	TNPO3	100	85.414	Cercocebus_atys
ENSHCOG00000007221	tnpo3	100	84.142	ENSCLAG00000016298	TNPO3	100	84.142	Chinchilla_lanigera
ENSHCOG00000007221	tnpo3	100	85.265	ENSCSAG00000009966	TNPO3	100	85.265	Chlorocebus_sabaeus
ENSHCOG00000007221	tnpo3	99	60.673	ENSCHOG00000011547	TNPO3	99	60.673	Choloepus_hoffmanni
ENSHCOG00000007221	tnpo3	93	84.014	ENSCPBG00000017497	TNPO3	100	84.014	Chrysemys_picta_bellii
ENSHCOG00000007221	tnpo3	99	48.475	ENSCING00000005042	-	99	48.475	Ciona_intestinalis
ENSHCOG00000007221	tnpo3	99	47.764	ENSCSAVG00000008623	-	94	53.455	Ciona_savignyi
ENSHCOG00000007221	tnpo3	100	85.265	ENSCANG00000033070	TNPO3	100	85.414	Colobus_angolensis_palliatus
ENSHCOG00000007221	tnpo3	100	85.049	ENSCGRG00001015925	Tnpo3	100	85.049	Cricetulus_griseus_chok1gshd
ENSHCOG00000007221	tnpo3	100	85.049	ENSCGRG00000010379	Tnpo3	100	85.049	Cricetulus_griseus_crigri
ENSHCOG00000007221	tnpo3	100	90.683	ENSCSEG00000005952	tnpo3	100	90.683	Cynoglossus_semilaevis
ENSHCOG00000007221	tnpo3	100	91.333	ENSCVAG00000020285	tnpo3	100	91.333	Cyprinodon_variegatus
ENSHCOG00000007221	tnpo3	100	89.599	ENSDARG00000045680	tnpo3	100	89.599	Danio_rerio
ENSHCOG00000007221	tnpo3	100	85.157	ENSDNOG00000002556	TNPO3	100	85.157	Dasypus_novemcinctus
ENSHCOG00000007221	tnpo3	91	82.160	ENSDORG00000002433	Tnpo3	98	81.833	Dipodomys_ordii
ENSHCOG00000007221	tnpo3	99	42.734	FBgn0031456	Tnpo-SR	99	42.734	Drosophila_melanogaster
ENSHCOG00000007221	tnpo3	95	84.835	ENSETEG00000002101	TNPO3	90	84.835	Echinops_telfairi
ENSHCOG00000007221	tnpo3	99	69.674	ENSEBUG00000016931	tnpo3	99	69.674	Eptatretus_burgeri
ENSHCOG00000007221	tnpo3	100	85.157	ENSEASG00005008677	TNPO3	100	85.157	Equus_asinus_asinus
ENSHCOG00000007221	tnpo3	100	85.157	ENSECAG00000012815	TNPO3	100	85.298	Equus_caballus
ENSHCOG00000007221	tnpo3	60	31.280	ENSEEUG00000011681	IPO13	72	31.280	Erinaceus_europaeus
ENSHCOG00000007221	tnpo3	99	79.894	ENSEEUG00000005178	TNPO3	98	79.894	Erinaceus_europaeus
ENSHCOG00000007221	tnpo3	99	91.621	ENSELUG00000012153	tnpo3	99	91.621	Esox_lucius
ENSHCOG00000007221	tnpo3	100	85.265	ENSFCAG00000018186	TNPO3	100	85.414	Felis_catus
ENSHCOG00000007221	tnpo3	96	80.602	ENSFALG00000010667	TNPO3	100	80.602	Ficedula_albicollis
ENSHCOG00000007221	tnpo3	100	84.649	ENSFDAG00000019578	TNPO3	100	84.649	Fukomys_damarensis
ENSHCOG00000007221	tnpo3	99	91.413	ENSFHEG00000012859	tnpo3	99	91.413	Fundulus_heteroclitus
ENSHCOG00000007221	tnpo3	100	90.574	ENSGMOG00000007324	tnpo3	100	90.574	Gadus_morhua
ENSHCOG00000007221	tnpo3	91	81.604	ENSGALG00000039420	TNPO3	99	84.099	Gallus_gallus
ENSHCOG00000007221	tnpo3	63	86.735	ENSGAFG00000017639	tnpo3	100	90.034	Gambusia_affinis
ENSHCOG00000007221	tnpo3	100	92.633	ENSGACG00000000699	tnpo3	100	92.633	Gasterosteus_aculeatus
ENSHCOG00000007221	tnpo3	93	83.897	ENSGAGG00000006777	TNPO3	100	83.897	Gopherus_agassizii
ENSHCOG00000007221	tnpo3	100	85.265	ENSGGOG00000008339	TNPO3	100	85.414	Gorilla_gorilla
ENSHCOG00000007221	tnpo3	100	92.741	ENSHBUG00000008351	tnpo3	100	92.741	Haplochromis_burtoni
ENSHCOG00000007221	tnpo3	100	85.157	ENSHGLG00000004463	TNPO3	100	85.157	Heterocephalus_glaber_female
ENSHCOG00000007221	tnpo3	100	85.157	ENSHGLG00100005509	TNPO3	100	85.157	Heterocephalus_glaber_male
ENSHCOG00000007221	tnpo3	100	88.516	ENSIPUG00000014979	TNPO3	99	88.516	Ictalurus_punctatus
ENSHCOG00000007221	tnpo3	100	85.157	ENSSTOG00000004885	TNPO3	100	85.298	Ictidomys_tridecemlineatus
ENSHCOG00000007221	tnpo3	100	79.698	ENSJJAG00000013530	Tnpo3	100	79.698	Jaculus_jaculus
ENSHCOG00000007221	tnpo3	100	91.874	ENSKMAG00000010497	tnpo3	100	91.874	Kryptolebias_marmoratus
ENSHCOG00000007221	tnpo3	96	87.656	ENSLBEG00000011988	-	99	87.656	Labrus_bergylta
ENSHCOG00000007221	tnpo3	96	89.807	ENSLBEG00000016595	tnpo3	100	89.807	Labrus_bergylta
ENSHCOG00000007221	tnpo3	83	85.870	ENSLACG00000002351	TNPO3	99	85.870	Latimeria_chalumnae
ENSHCOG00000007221	tnpo3	100	89.166	ENSLOCG00000015556	tnpo3	100	89.166	Lepisosteus_oculatus
ENSHCOG00000007221	tnpo3	100	84.574	ENSLAFG00000002738	TNPO3	100	84.574	Loxodonta_africana
ENSHCOG00000007221	tnpo3	100	85.265	ENSMFAG00000032385	TNPO3	100	85.414	Macaca_fascicularis
ENSHCOG00000007221	tnpo3	100	85.265	ENSMMUG00000004311	TNPO3	100	85.414	Macaca_mulatta
ENSHCOG00000007221	tnpo3	100	85.265	ENSMNEG00000045277	TNPO3	100	85.414	Macaca_nemestrina
ENSHCOG00000007221	tnpo3	100	85.265	ENSMLEG00000037881	TNPO3	100	85.414	Mandrillus_leucophaeus
ENSHCOG00000007221	tnpo3	100	93.066	ENSMAMG00000021096	tnpo3	100	93.066	Mastacembelus_armatus
ENSHCOG00000007221	tnpo3	100	92.741	ENSMZEG00005015084	tnpo3	100	92.741	Maylandia_zebra
ENSHCOG00000007221	tnpo3	84	80.769	ENSMGAG00000002839	TNPO3	99	80.966	Meleagris_gallopavo
ENSHCOG00000007221	tnpo3	100	84.940	ENSMAUG00000013463	Tnpo3	100	84.940	Mesocricetus_auratus
ENSHCOG00000007221	tnpo3	73	32.031	ENSMICG00000011003	IPO13	83	32.544	Microcebus_murinus
ENSHCOG00000007221	tnpo3	100	85.265	ENSMICG00000000140	TNPO3	100	85.265	Microcebus_murinus
ENSHCOG00000007221	tnpo3	100	85.049	ENSMOCG00000013264	Tnpo3	100	85.049	Microtus_ochrogaster
ENSHCOG00000007221	tnpo3	100	92.308	ENSMMOG00000005887	tnpo3	100	92.308	Mola_mola
ENSHCOG00000007221	tnpo3	100	85.374	ENSMODG00000014700	TNPO3	100	85.374	Monodelphis_domestica
ENSHCOG00000007221	tnpo3	100	92.741	ENSMALG00000006675	tnpo3	100	92.741	Monopterus_albus
ENSHCOG00000007221	tnpo3	100	84.940	MGP_CAROLIEiJ_G0028176	Tnpo3	100	84.940	Mus_caroli
ENSHCOG00000007221	tnpo3	100	84.940	ENSMUSG00000012535	Tnpo3	100	84.940	Mus_musculus
ENSHCOG00000007221	tnpo3	100	84.940	MGP_PahariEiJ_G0021934	Tnpo3	100	84.940	Mus_pahari
ENSHCOG00000007221	tnpo3	100	84.832	MGP_SPRETEiJ_G0029176	Tnpo3	100	84.832	Mus_spretus
ENSHCOG00000007221	tnpo3	100	85.265	ENSMPUG00000006021	TNPO3	100	85.265	Mustela_putorius_furo
ENSHCOG00000007221	tnpo3	100	76.273	ENSMLUG00000000947	TNPO3	100	76.273	Myotis_lucifugus
ENSHCOG00000007221	tnpo3	100	85.157	ENSNGAG00000008722	Tnpo3	100	85.157	Nannospalax_galili
ENSHCOG00000007221	tnpo3	100	91.116	ENSNBRG00000019001	tnpo3	100	92.559	Neolamprologus_brichardi
ENSHCOG00000007221	tnpo3	100	82.132	ENSNLEG00000012491	TNPO3	100	84.692	Nomascus_leucogenys
ENSHCOG00000007221	tnpo3	77	86.992	ENSMEUG00000002445	TNPO3	91	71.537	Notamacropus_eugenii
ENSHCOG00000007221	tnpo3	91	84.783	ENSOPRG00000006163	TNPO3	90	84.783	Ochotona_princeps
ENSHCOG00000007221	tnpo3	98	84.922	ENSODEG00000012826	TNPO3	100	84.922	Octodon_degus
ENSHCOG00000007221	tnpo3	100	92.849	ENSONIG00000007604	tnpo3	100	92.849	Oreochromis_niloticus
ENSHCOG00000007221	tnpo3	95	81.759	ENSOANG00000011451	TNPO3	100	81.759	Ornithorhynchus_anatinus
ENSHCOG00000007221	tnpo3	99	82.143	ENSOCUG00000010105	TNPO3	99	82.143	Oryctolagus_cuniculus
ENSHCOG00000007221	tnpo3	100	91.441	ENSORLG00000029369	tnpo3	100	91.441	Oryzias_latipes
ENSHCOG00000007221	tnpo3	100	91.441	ENSORLG00020003464	tnpo3	100	91.441	Oryzias_latipes_hni
ENSHCOG00000007221	tnpo3	100	91.549	ENSORLG00015002610	tnpo3	100	91.549	Oryzias_latipes_hsok
ENSHCOG00000007221	tnpo3	63	30.332	ENSOMEG00000001924	ipo13	89	30.208	Oryzias_melastigma
ENSHCOG00000007221	tnpo3	100	91.441	ENSOMEG00000021006	tnpo3	100	91.441	Oryzias_melastigma
ENSHCOG00000007221	tnpo3	100	85.157	ENSOGAG00000015340	TNPO3	100	85.157	Otolemur_garnettii
ENSHCOG00000007221	tnpo3	100	85.157	ENSOARG00000004026	TNPO3	100	85.157	Ovis_aries
ENSHCOG00000007221	tnpo3	100	85.265	ENSPPAG00000034975	TNPO3	100	85.414	Pan_paniscus
ENSHCOG00000007221	tnpo3	100	85.265	ENSPPRG00000002050	TNPO3	100	85.265	Panthera_pardus
ENSHCOG00000007221	tnpo3	100	85.265	ENSPTIG00000016167	TNPO3	100	85.265	Panthera_tigris_altaica
ENSHCOG00000007221	tnpo3	100	85.265	ENSPTRG00000019676	TNPO3	100	85.414	Pan_troglodytes
ENSHCOG00000007221	tnpo3	98	85.193	ENSPANG00000022226	TNPO3	100	84.692	Papio_anubis
ENSHCOG00000007221	tnpo3	100	83.261	ENSPKIG00000008628	-	100	83.261	Paramormyrops_kingsleyae
ENSHCOG00000007221	tnpo3	100	87.432	ENSPKIG00000023234	tnpo3	100	87.432	Paramormyrops_kingsleyae
ENSHCOG00000007221	tnpo3	77	80.278	ENSPSIG00000006156	-	94	83.152	Pelodiscus_sinensis
ENSHCOG00000007221	tnpo3	83	86.375	ENSPMGG00000009763	tnpo3	99	84.155	Periophthalmus_magnuspinnatus
ENSHCOG00000007221	tnpo3	100	84.940	ENSPEMG00000000422	Tnpo3	100	84.940	Peromyscus_maniculatus_bairdii
ENSHCOG00000007221	tnpo3	95	72.140	ENSPMAG00000008621	tnpo3	100	72.140	Petromyzon_marinus
ENSHCOG00000007221	tnpo3	72	30.806	ENSPCIG00000015573	IPO13	73	30.806	Phascolarctos_cinereus
ENSHCOG00000007221	tnpo3	100	85.049	ENSPCIG00000011366	TNPO3	100	85.049	Phascolarctos_cinereus
ENSHCOG00000007221	tnpo3	100	92.199	ENSPFOG00000013592	tnpo3	99	92.199	Poecilia_formosa
ENSHCOG00000007221	tnpo3	100	92.199	ENSPLAG00000010188	tnpo3	100	92.199	Poecilia_latipinna
ENSHCOG00000007221	tnpo3	100	92.308	ENSPMEG00000022731	tnpo3	100	92.308	Poecilia_mexicana
ENSHCOG00000007221	tnpo3	63	86.735	ENSPREG00000019847	tnpo3	100	90.034	Poecilia_reticulata
ENSHCOG00000007221	tnpo3	100	85.265	ENSPPYG00000017990	TNPO3	100	85.265	Pongo_abelii
ENSHCOG00000007221	tnpo3	99	75.866	ENSPCAG00000010158	TNPO3	98	75.866	Procavia_capensis
ENSHCOG00000007221	tnpo3	87	85.855	ENSPCOG00000023901	TNPO3	96	85.855	Propithecus_coquereli
ENSHCOG00000007221	tnpo3	99	79.517	ENSPVAG00000015757	TNPO3	98	79.517	Pteropus_vampyrus
ENSHCOG00000007221	tnpo3	100	92.741	ENSPNYG00000002349	tnpo3	100	92.741	Pundamilia_nyererei
ENSHCOG00000007221	tnpo3	100	90.466	ENSPNAG00000001142	tnpo3	100	90.466	Pygocentrus_nattereri
ENSHCOG00000007221	tnpo3	100	84.832	ENSRNOG00000021758	Tnpo3	100	84.947	Rattus_norvegicus
ENSHCOG00000007221	tnpo3	100	85.265	ENSRBIG00000042549	TNPO3	100	85.414	Rhinopithecus_bieti
ENSHCOG00000007221	tnpo3	100	85.265	ENSRROG00000039264	TNPO3	100	85.265	Rhinopithecus_roxellana
ENSHCOG00000007221	tnpo3	93	77.535	ENSSBOG00000029642	TNPO3	100	77.535	Saimiri_boliviensis_boliviensis
ENSHCOG00000007221	tnpo3	96	85.504	ENSSHAG00000006837	TNPO3	100	85.504	Sarcophilus_harrisii
ENSHCOG00000007221	tnpo3	100	88.082	ENSSFOG00015001474	tnpo3	100	88.082	Scleropages_formosus
ENSHCOG00000007221	tnpo3	100	83.120	ENSSFOG00015004256	tnpo3	100	83.120	Scleropages_formosus
ENSHCOG00000007221	tnpo3	100	92.308	ENSSMAG00000010422	tnpo3	97	92.308	Scophthalmus_maximus
ENSHCOG00000007221	tnpo3	100	93.499	ENSSDUG00000004850	tnpo3	100	93.499	Seriola_dumerili
ENSHCOG00000007221	tnpo3	100	93.499	ENSSLDG00000016927	tnpo3	100	93.499	Seriola_lalandi_dorsalis
ENSHCOG00000007221	tnpo3	95	73.817	ENSSARG00000013893	TNPO3	98	73.817	Sorex_araneus
ENSHCOG00000007221	tnpo3	99	79.957	ENSSPUG00000007457	TNPO3	99	80.000	Sphenodon_punctatus
ENSHCOG00000007221	tnpo3	91	88.967	ENSSPAG00000014209	tnpo3	99	92.837	Stegastes_partitus
ENSHCOG00000007221	tnpo3	100	85.265	ENSSSCG00000016572	TNPO3	100	85.414	Sus_scrofa
ENSHCOG00000007221	tnpo3	63	80.952	ENSTRUG00000025251	tnpo3	100	82.253	Takifugu_rubripes
ENSHCOG00000007221	tnpo3	100	91.253	ENSTNIG00000003347	tnpo3	100	91.253	Tetraodon_nigroviridis
ENSHCOG00000007221	tnpo3	88	84.790	ENSTBEG00000007220	TNPO3	90	84.790	Tupaia_belangeri
ENSHCOG00000007221	tnpo3	99	72.899	ENSTTRG00000014618	TNPO3	98	72.899	Tursiops_truncatus
ENSHCOG00000007221	tnpo3	100	85.265	ENSUAMG00000021281	TNPO3	100	85.265	Ursus_americanus
ENSHCOG00000007221	tnpo3	100	85.265	ENSUMAG00000006882	TNPO3	100	85.265	Ursus_maritimus
ENSHCOG00000007221	tnpo3	85	72.968	ENSVPAG00000006166	TNPO3	88	72.968	Vicugna_pacos
ENSHCOG00000007221	tnpo3	100	85.265	ENSVVUG00000011004	TNPO3	100	85.366	Vulpes_vulpes
ENSHCOG00000007221	tnpo3	99	76.815	ENSXETG00000015009	tnpo3	99	76.815	Xenopus_tropicalis
ENSHCOG00000007221	tnpo3	63	86.395	ENSXCOG00000011552	tnpo3	100	89.691	Xiphophorus_couchianus
ENSHCOG00000007221	tnpo3	100	91.983	ENSXMAG00000013062	tnpo3	100	91.983	Xiphophorus_maculatus