EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007262 (Gene tree)
Gene ID: 109518247
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6240 bases
Position: chrKV880028.1:930611-936850
Accession: 109518247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020842	Snurportin1	PF11538.8	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005154	-	2506	XM_019873983	ENSHCOP00000020842	375 (aa)	XP_019729542	UPI00094E5F5E

Gene Model

Click here to download ENSHCOG00000007262's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007262	snupn	95	65.193	ENSG00000169371	SNUPN	100	74.603	Homo_sapiens
ENSHCOG00000007262	snupn	99	84.881	ENSAPOG00000016953	snupn	99	84.615	Acanthochromis_polyacanthus
ENSHCOG00000007262	snupn	95	65.278	ENSAMEG00000008291	SNUPN	94	64.722	Ailuropoda_melanoleuca
ENSHCOG00000007262	snupn	99	81.698	ENSACIG00000012409	snupn	99	81.698	Amphilophus_citrinellus
ENSHCOG00000007262	snupn	99	84.350	ENSAOCG00000018096	snupn	99	84.085	Amphiprion_ocellaris
ENSHCOG00000007262	snupn	99	84.350	ENSAPEG00000008834	snupn	99	84.085	Amphiprion_percula
ENSHCOG00000007262	snupn	99	82.759	ENSATEG00000021019	snupn	99	82.759	Anabas_testudineus
ENSHCOG00000007262	snupn	95	66.667	ENSANAG00000025568	SNUPN	95	66.667	Aotus_nancymaae
ENSHCOG00000007262	snupn	99	81.432	ENSACLG00000025155	snupn	99	81.432	Astatotilapia_calliptera
ENSHCOG00000007262	snupn	98	77.358	ENSAMXG00000038311	snupn	100	75.946	Astyanax_mexicanus
ENSHCOG00000007262	snupn	99	63.061	ENSBTAG00000021293	SNUPN	100	62.533	Bos_taurus
ENSHCOG00000007262	snupn	83	42.357	WBGene00017746	F23F1.5	88	41.270	Caenorhabditis_elegans
ENSHCOG00000007262	snupn	97	64.658	ENSCJAG00000003005	SNUPN	97	64.384	Callithrix_jacchus
ENSHCOG00000007262	snupn	95	63.866	ENSCAFG00000018035	SNUPN	95	63.585	Canis_familiaris
ENSHCOG00000007262	snupn	95	64.543	ENSCHIG00000018047	SNUPN	95	63.989	Capra_hircus
ENSHCOG00000007262	snupn	95	63.260	ENSTSYG00000037224	SNUPN	95	62.983	Carlito_syrichta
ENSHCOG00000007262	snupn	95	57.851	ENSCAPG00000005061	SNUPN	98	57.297	Cavia_aperea
ENSHCOG00000007262	snupn	95	65.840	ENSCPOG00000034772	SNUPN	98	65.135	Cavia_porcellus
ENSHCOG00000007262	snupn	95	66.106	ENSCCAG00000016169	-	95	66.106	Cebus_capucinus
ENSHCOG00000007262	snupn	95	64.820	ENSCATG00000039783	SNUPN	95	64.820	Cercocebus_atys
ENSHCOG00000007262	snupn	94	64.624	ENSCLAG00000016968	SNUPN	95	65.000	Chinchilla_lanigera
ENSHCOG00000007262	snupn	95	63.989	ENSCSAG00000019246	-	95	63.989	Chlorocebus_sabaeus
ENSHCOG00000007262	snupn	95	64.820	ENSCSAG00000014576	-	85	64.820	Chlorocebus_sabaeus
ENSHCOG00000007262	snupn	95	51.801	ENSCHOG00000005403	SNUPN	95	51.247	Choloepus_hoffmanni
ENSHCOG00000007262	snupn	99	64.042	ENSCPBG00000022172	SNUPN	95	63.421	Chrysemys_picta_bellii
ENSHCOG00000007262	snupn	95	65.097	ENSCANG00000029707	SNUPN	95	65.097	Colobus_angolensis_palliatus
ENSHCOG00000007262	snupn	95	65.833	ENSCGRG00001004622	Snupn	96	65.833	Cricetulus_griseus_chok1gshd
ENSHCOG00000007262	snupn	95	65.833	ENSCGRG00000002515	Snupn	96	65.833	Cricetulus_griseus_crigri
ENSHCOG00000007262	snupn	99	76.127	ENSCSEG00000003160	snupn	89	75.862	Cynoglossus_semilaevis
ENSHCOG00000007262	snupn	99	80.371	ENSCVAG00000010502	snupn	99	78.780	Cyprinodon_variegatus
ENSHCOG00000007262	snupn	99	73.190	ENSDARG00000008395	snupn	99	72.922	Danio_rerio
ENSHCOG00000007262	snupn	95	63.305	ENSDNOG00000044304	SNUPN	90	62.745	Dasypus_novemcinctus
ENSHCOG00000007262	snupn	95	64.820	ENSDORG00000009051	Snupn	95	64.543	Dipodomys_ordii
ENSHCOG00000007262	snupn	95	55.278	ENSETEG00000013792	SNUPN	81	71.154	Echinops_telfairi
ENSHCOG00000007262	snupn	96	54.424	ENSEBUG00000006682	snupn	94	53.887	Eptatretus_burgeri
ENSHCOG00000007262	snupn	99	62.533	ENSEASG00005015697	SNUPN	97	62.797	Equus_asinus_asinus
ENSHCOG00000007262	snupn	96	64.384	ENSECAG00000017726	SNUPN	96	64.658	Equus_caballus
ENSHCOG00000007262	snupn	66	65.672	ENSEEUG00000000981	-	65	65.672	Erinaceus_europaeus
ENSHCOG00000007262	snupn	96	77.869	ENSELUG00000023305	snupn	95	76.503	Esox_lucius
ENSHCOG00000007262	snupn	95	64.722	ENSFCAG00000040981	SNUPN	95	64.167	Felis_catus
ENSHCOG00000007262	snupn	95	65.651	ENSFDAG00000011599	SNUPN	96	65.014	Fukomys_damarensis
ENSHCOG00000007262	snupn	99	81.432	ENSFHEG00000017627	snupn	99	81.432	Fundulus_heteroclitus
ENSHCOG00000007262	snupn	95	80.845	ENSGMOG00000009272	snupn	100	80.563	Gadus_morhua
ENSHCOG00000007262	snupn	95	60.548	ENSGALG00000029537	SNUPN	100	57.841	Gallus_gallus
ENSHCOG00000007262	snupn	99	80.688	ENSGAFG00000004954	snupn	99	79.841	Gambusia_affinis
ENSHCOG00000007262	snupn	95	84.789	ENSGACG00000007450	snupn	100	84.507	Gasterosteus_aculeatus
ENSHCOG00000007262	snupn	99	62.730	ENSGAGG00000022470	SNUPN	99	63.158	Gopherus_agassizii
ENSHCOG00000007262	snupn	53	66.667	ENSGGOG00000004581	-	92	75.472	Gorilla_gorilla
ENSHCOG00000007262	snupn	99	81.963	ENSHBUG00000006950	snupn	99	81.963	Haplochromis_burtoni
ENSHCOG00000007262	snupn	95	64.444	ENSHGLG00000000536	SNUPN	96	64.722	Heterocephalus_glaber_female
ENSHCOG00000007262	snupn	95	64.444	ENSHGLG00100016161	SNUPN	96	64.722	Heterocephalus_glaber_male
ENSHCOG00000007262	snupn	98	73.585	ENSIPUG00000014460	Snupn	100	72.973	Ictalurus_punctatus
ENSHCOG00000007262	snupn	95	64.444	ENSSTOG00000005904	SNUPN	95	64.722	Ictidomys_tridecemlineatus
ENSHCOG00000007262	snupn	99	76.127	ENSKMAG00000009957	snupn	99	76.923	Kryptolebias_marmoratus
ENSHCOG00000007262	snupn	99	83.554	ENSLBEG00000020694	snupn	99	83.554	Labrus_bergylta
ENSHCOG00000007262	snupn	99	62.234	ENSLACG00000015801	SNUPN	100	62.500	Latimeria_chalumnae
ENSHCOG00000007262	snupn	98	74.124	ENSLOCG00000015064	snupn	98	73.046	Lepisosteus_oculatus
ENSHCOG00000007262	snupn	95	64.266	ENSLAFG00000004422	SNUPN	95	63.712	Loxodonta_africana
ENSHCOG00000007262	snupn	64	73.611	ENSMFAG00000003706	SNUPN	94	67.816	Macaca_fascicularis
ENSHCOG00000007262	snupn	95	65.097	ENSMMUG00000004784	SNUPN	95	65.097	Macaca_mulatta
ENSHCOG00000007262	snupn	95	60.665	ENSMLEG00000041966	SNUPN	94	60.665	Mandrillus_leucophaeus
ENSHCOG00000007262	snupn	99	84.350	ENSMAMG00000023109	snupn	99	84.085	Mastacembelus_armatus
ENSHCOG00000007262	snupn	99	81.698	ENSMZEG00005010806	snupn	99	81.698	Maylandia_zebra
ENSHCOG00000007262	snupn	95	66.111	ENSMAUG00000020426	Snupn	96	66.111	Mesocricetus_auratus
ENSHCOG00000007262	snupn	97	63.172	ENSMICG00000016438	SNUPN	98	63.441	Microcebus_murinus
ENSHCOG00000007262	snupn	95	66.205	ENSMOCG00000014238	Snupn	96	65.278	Microtus_ochrogaster
ENSHCOG00000007262	snupn	99	83.024	ENSMMOG00000001321	snupn	99	83.024	Mola_mola
ENSHCOG00000007262	snupn	95	62.943	ENSMODG00000008852	SNUPN	95	62.022	Monodelphis_domestica
ENSHCOG00000007262	snupn	99	80.902	ENSMALG00000015058	snupn	99	80.637	Monopterus_albus
ENSHCOG00000007262	snupn	99	63.228	MGP_CAROLIEiJ_G0032259	Snupn	97	64.835	Mus_caroli
ENSHCOG00000007262	snupn	99	63.588	ENSMUSG00000055334	Snupn	97	64.560	Mus_musculus
ENSHCOG00000007262	snupn	95	65.556	MGP_PahariEiJ_G0015126	Snupn	96	65.556	Mus_pahari
ENSHCOG00000007262	snupn	99	63.588	MGP_SPRETEiJ_G0033399	Snupn	97	64.560	Mus_spretus
ENSHCOG00000007262	snupn	99	62.434	ENSMPUG00000017324	SNUPN	100	61.905	Mustela_putorius_furo
ENSHCOG00000007262	snupn	95	63.912	ENSMLUG00000027517	-	95	63.812	Myotis_lucifugus
ENSHCOG00000007262	snupn	95	54.396	ENSMLUG00000000038	-	99	54.270	Myotis_lucifugus
ENSHCOG00000007262	snupn	97	59.299	ENSMLUG00000027485	-	97	59.189	Myotis_lucifugus
ENSHCOG00000007262	snupn	95	63.889	ENSNGAG00000018735	Snupn	95	64.722	Nannospalax_galili
ENSHCOG00000007262	snupn	99	81.698	ENSNBRG00000017919	snupn	99	81.698	Neolamprologus_brichardi
ENSHCOG00000007262	snupn	62	74.074	ENSNLEG00000035240	-	77	74.074	Nomascus_leucogenys
ENSHCOG00000007262	snupn	95	53.039	ENSOPRG00000015889	-	95	53.591	Ochotona_princeps
ENSHCOG00000007262	snupn	76	87.500	ENSODEG00000014491	SNUPN	98	65.882	Octodon_degus
ENSHCOG00000007262	snupn	95	85.714	ENSONIG00000012855	snupn	97	85.714	Oreochromis_niloticus
ENSHCOG00000007262	snupn	96	63.014	ENSOCUG00000008801	SNUPN	95	63.812	Oryctolagus_cuniculus
ENSHCOG00000007262	snupn	99	81.167	ENSORLG00000001836	snupn	99	80.371	Oryzias_latipes
ENSHCOG00000007262	snupn	99	80.371	ENSORLG00020021175	snupn	99	80.106	Oryzias_latipes_hni
ENSHCOG00000007262	snupn	99	80.371	ENSORLG00015014444	snupn	99	80.106	Oryzias_latipes_hsok
ENSHCOG00000007262	snupn	99	82.228	ENSOMEG00000004853	snupn	99	81.963	Oryzias_melastigma
ENSHCOG00000007262	snupn	99	61.316	ENSOGAG00000004915	SNUPN	100	61.579	Otolemur_garnettii
ENSHCOG00000007262	snupn	99	62.533	ENSOARG00000001991	SNUPN	97	62.005	Ovis_aries
ENSHCOG00000007262	snupn	95	65.746	ENSPPAG00000034351	SNUPN	95	65.097	Pan_paniscus
ENSHCOG00000007262	snupn	95	64.722	ENSPPRG00000023192	SNUPN	95	64.167	Panthera_pardus
ENSHCOG00000007262	snupn	95	64.722	ENSPTIG00000003528	SNUPN	95	64.167	Panthera_tigris_altaica
ENSHCOG00000007262	snupn	95	65.470	ENSPTRG00000007302	SNUPN	95	64.820	Pan_troglodytes
ENSHCOG00000007262	snupn	95	57.064	ENSPANG00000034514	SNUPN	94	57.064	Papio_anubis
ENSHCOG00000007262	snupn	95	73.389	ENSPKIG00000012444	snupn	96	73.389	Paramormyrops_kingsleyae
ENSHCOG00000007262	snupn	99	62.402	ENSPSIG00000015229	SNUPN	100	62.042	Pelodiscus_sinensis
ENSHCOG00000007262	snupn	95	76.243	ENSPMGG00000023843	snupn	95	76.471	Periophthalmus_magnuspinnatus
ENSHCOG00000007262	snupn	99	62.269	ENSPCIG00000007854	SNUPN	100	61.905	Phascolarctos_cinereus
ENSHCOG00000007262	snupn	99	81.963	ENSPFOG00000014221	snupn	98	81.432	Poecilia_formosa
ENSHCOG00000007262	snupn	99	82.759	ENSPLAG00000002339	snupn	98	81.432	Poecilia_latipinna
ENSHCOG00000007262	snupn	99	81.698	ENSPMEG00000012436	snupn	98	81.167	Poecilia_mexicana
ENSHCOG00000007262	snupn	99	81.963	ENSPREG00000012683	snupn	98	81.432	Poecilia_reticulata
ENSHCOG00000007262	snupn	95	58.287	ENSPPYG00000006663	SNUPN	94	57.618	Pongo_abelii
ENSHCOG00000007262	snupn	95	64.444	ENSPCOG00000025482	SNUPN	95	64.444	Propithecus_coquereli
ENSHCOG00000007262	snupn	94	64.266	ENSPVAG00000010035	SNUPN	95	62.881	Pteropus_vampyrus
ENSHCOG00000007262	snupn	99	81.963	ENSPNYG00000008752	snupn	99	81.963	Pundamilia_nyererei
ENSHCOG00000007262	snupn	95	78.090	ENSPNAG00000026875	snupn	96	76.338	Pygocentrus_nattereri
ENSHCOG00000007262	snupn	95	65.278	ENSRNOG00000005426	Snupn	96	65.556	Rattus_norvegicus
ENSHCOG00000007262	snupn	97	63.710	ENSRBIG00000038665	SNUPN	98	63.710	Rhinopithecus_bieti
ENSHCOG00000007262	snupn	97	63.710	ENSRROG00000043625	SNUPN	98	63.710	Rhinopithecus_roxellana
ENSHCOG00000007262	snupn	95	66.947	ENSSBOG00000029086	-	95	66.947	Saimiri_boliviensis_boliviensis
ENSHCOG00000007262	snupn	90	79.351	ENSSFOG00015022264	snupn	66	77.219	Scleropages_formosus
ENSHCOG00000007262	snupn	99	84.921	ENSSMAG00000005485	snupn	100	84.656	Scophthalmus_maximus
ENSHCOG00000007262	snupn	99	85.676	ENSSDUG00000023461	snupn	99	85.411	Seriola_dumerili
ENSHCOG00000007262	snupn	99	85.411	ENSSLDG00000001425	snupn	99	84.881	Seriola_lalandi_dorsalis
ENSHCOG00000007262	snupn	95	53.186	ENSSARG00000005585	SNUPN	94	53.186	Sorex_araneus
ENSHCOG00000007262	snupn	99	61.417	ENSSPUG00000014331	SNUPN	95	63.361	Sphenodon_punctatus
ENSHCOG00000007262	snupn	99	85.411	ENSSPAG00000001216	snupn	99	85.146	Stegastes_partitus
ENSHCOG00000007262	snupn	95	65.097	ENSSSCG00000001877	SNUPN	95	64.543	Sus_scrofa
ENSHCOG00000007262	snupn	99	83.024	ENSTRUG00000016085	snupn	98	82.493	Takifugu_rubripes
ENSHCOG00000007262	snupn	94	71.031	ENSTNIG00000008456	snupn	100	71.309	Tetraodon_nigroviridis
ENSHCOG00000007262	snupn	95	64.088	ENSTBEG00000002434	SNUPN	95	63.435	Tupaia_belangeri
ENSHCOG00000007262	snupn	97	58.333	ENSTTRG00000011484	SNUPN	95	59.003	Tursiops_truncatus
ENSHCOG00000007262	snupn	95	65.278	ENSUAMG00000022723	SNUPN	95	64.722	Ursus_americanus
ENSHCOG00000007262	snupn	95	65.556	ENSUMAG00000003738	SNUPN	95	65.000	Ursus_maritimus
ENSHCOG00000007262	snupn	95	64.246	ENSVVUG00000019574	SNUPN	95	63.585	Vulpes_vulpes
ENSHCOG00000007262	snupn	95	65.738	ENSXETG00000015280	snupn	99	63.408	Xenopus_tropicalis
ENSHCOG00000007262	snupn	99	82.493	ENSXMAG00000006634	snupn	99	81.963	Xiphophorus_maculatus