EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007306 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7221 bases
Position: chrKV880232.1:850729-857949
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005614	RNase_Zc3h12a	PF11977.8	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005067	-	489	-	ENSHCOP00000005614	162 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007306	-	92	46.753	ENSHCOG00000017425	-	75	48.276
ENSHCOG00000007306	-	83	49.630	ENSHCOG00000008878	-	55	48.966
ENSHCOG00000007306	-	82	43.243	ENSHCOG00000004255	si:dkey-206d17.12	57	43.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007306	-	85	47.973	ENSG00000163874	ZC3H12A	52	48.980	Homo_sapiens
ENSHCOG00000007306	-	93	67.516	ENSACIG00000006790	-	99	67.516	Amphilophus_citrinellus
ENSHCOG00000007306	-	86	40.260	ENSACIG00000004135	si:dkey-206d17.12	54	40.260	Amphilophus_citrinellus
ENSHCOG00000007306	-	85	44.755	ENSAOCG00000014326	-	55	44.755	Amphiprion_ocellaris
ENSHCOG00000007306	-	86	39.375	ENSAOCG00000001288	-	58	43.949	Amphiprion_ocellaris
ENSHCOG00000007306	-	86	44.304	ENSAOCG00000003866	-	79	48.387	Amphiprion_ocellaris
ENSHCOG00000007306	-	85	44.056	ENSAPEG00000021795	si:dkey-206d17.12	55	44.056	Amphiprion_percula
ENSHCOG00000007306	-	86	44.304	ENSAPEG00000005727	-	89	47.297	Amphiprion_percula
ENSHCOG00000007306	-	86	40.000	ENSAPEG00000022263	-	58	44.586	Amphiprion_percula
ENSHCOG00000007306	-	86	44.304	ENSATEG00000002260	-	56	47.468	Anabas_testudineus
ENSHCOG00000007306	-	90	40.373	ENSATEG00000006140	si:dkey-206d17.12	91	40.373	Anabas_testudineus
ENSHCOG00000007306	-	92	70.701	ENSATEG00000013053	-	80	77.857	Anabas_testudineus
ENSHCOG00000007306	-	85	50.340	ENSANAG00000009908	ZC3H12A	52	50.340	Aotus_nancymaae
ENSHCOG00000007306	-	83	50.000	ENSCATG00000037700	ZC3H12A	51	50.000	Cercocebus_atys
ENSHCOG00000007306	-	83	50.000	ENSCANG00000042287	ZC3H12A	51	50.000	Colobus_angolensis_palliatus
ENSHCOG00000007306	-	86	45.732	ENSCSEG00000010073	-	85	49.032	Cynoglossus_semilaevis
ENSHCOG00000007306	-	84	47.297	ENSCVAG00000016808	-	57	49.324	Cyprinodon_variegatus
ENSHCOG00000007306	-	92	69.427	ENSCVAG00000001077	-	59	69.427	Cyprinodon_variegatus
ENSHCOG00000007306	-	86	46.835	ENSFHEG00000021225	-	80	48.026	Fundulus_heteroclitus
ENSHCOG00000007306	-	92	68.790	ENSHBUG00000021584	-	61	68.790	Haplochromis_burtoni
ENSHCOG00000007306	-	86	44.231	ENSKMAG00000013285	-	58	47.436	Kryptolebias_marmoratus
ENSHCOG00000007306	-	86	43.624	ENSKMAG00000002156	ZC3H12A	55	43.624	Kryptolebias_marmoratus
ENSHCOG00000007306	-	80	48.684	ENSLBEG00000012554	-	94	47.399	Labrus_bergylta
ENSHCOG00000007306	-	92	55.769	ENSLBEG00000012121	-	90	58.065	Labrus_bergylta
ENSHCOG00000007306	-	83	50.000	ENSMFAG00000032647	ZC3H12A	51	50.000	Macaca_fascicularis
ENSHCOG00000007306	-	83	50.000	ENSMNEG00000040453	ZC3H12A	51	50.000	Macaca_nemestrina
ENSHCOG00000007306	-	83	50.000	ENSMLEG00000034570	ZC3H12A	51	50.000	Mandrillus_leucophaeus
ENSHCOG00000007306	-	86	45.860	ENSMAMG00000021794	-	91	50.000	Mastacembelus_armatus
ENSHCOG00000007306	-	92	68.153	ENSMAMG00000004463	-	60	68.153	Mastacembelus_armatus
ENSHCOG00000007306	-	90	43.671	ENSMZEG00005019137	-	95	47.468	Maylandia_zebra
ENSHCOG00000007306	-	86	39.355	ENSMZEG00005023410	ZC3H12A	52	39.355	Maylandia_zebra
ENSHCOG00000007306	-	98	40.000	ENSMMOG00000000727	zc3h12a	99	40.000	Mola_mola
ENSHCOG00000007306	-	92	65.605	ENSMMOG00000014855	-	88	72.464	Mola_mola
ENSHCOG00000007306	-	86	48.428	ENSMMOG00000005728	-	85	48.993	Mola_mola
ENSHCOG00000007306	-	85	50.000	MGP_SPRETEiJ_G0027441	Zc3h12a	53	50.000	Mus_spretus
ENSHCOG00000007306	-	92	69.032	ENSNBRG00000010961	-	60	69.032	Neolamprologus_brichardi
ENSHCOG00000007306	-	90	42.857	ENSNBRG00000012175	-	95	45.963	Neolamprologus_brichardi
ENSHCOG00000007306	-	87	45.161	ENSORLG00000009473	ZC3H12A	57	43.871	Oryzias_latipes
ENSHCOG00000007306	-	85	47.651	ENSPPAG00000041054	ZC3H12A	52	48.649	Pan_paniscus
ENSHCOG00000007306	-	85	48.649	ENSPTIG00000012943	ZC3H12A	52	48.649	Panthera_tigris_altaica
ENSHCOG00000007306	-	85	47.651	ENSPTRG00000000544	ZC3H12A	52	48.649	Pan_troglodytes
ENSHCOG00000007306	-	83	50.000	ENSPANG00000011821	ZC3H12A	51	50.000	Papio_anubis
ENSHCOG00000007306	-	92	68.153	ENSPMEG00000009279	-	63	68.153	Poecilia_mexicana
ENSHCOG00000007306	-	86	44.516	ENSPREG00000001607	-	50	47.742	Poecilia_reticulata
ENSHCOG00000007306	-	83	50.000	ENSRROG00000037444	ZC3H12A	51	50.000	Rhinopithecus_roxellana
ENSHCOG00000007306	-	83	45.070	ENSSDUG00000013237	-	89	50.000	Seriola_dumerili
ENSHCOG00000007306	-	92	69.231	ENSSDUG00000010581	-	90	75.362	Seriola_dumerili
ENSHCOG00000007306	-	86	43.871	ENSSLDG00000009317	si:dkey-206d17.12	56	43.871	Seriola_lalandi_dorsalis
ENSHCOG00000007306	-	84	45.752	ENSTNIG00000014519	-	57	47.712	Tetraodon_nigroviridis
ENSHCOG00000007306	-	92	68.790	ENSXCOG00000001538	-	86	75.182	Xiphophorus_couchianus
ENSHCOG00000007306	-	83	42.466	ENSXCOG00000008984	zc3h12a	84	43.885	Xiphophorus_couchianus
ENSHCOG00000007306	-	86	44.079	ENSXMAG00000014715	-	56	47.368	Xiphophorus_maculatus
ENSHCOG00000007306	-	92	68.790	ENSXMAG00000005023	-	86	75.182	Xiphophorus_maculatus