EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007325 (Gene tree)
Gene ID: 109508041
Gene Symbol: efl1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 79749 bases
Position: chrKV880514.1:277004-356752
Accession: 109508041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020891	GTP_EFTU	PF00009.27	1.3e-62	1	1
ENSHCOP00000020896	GTP_EFTU	PF00009.27	1.3e-62	1	1
ENSHCOP00000005616	GTP_EFTU	PF00009.27	2.2e-62	1	1
ENSHCOP00000005616	GTP_EFTU_D2	PF03144.25	8.3e-09	1	1
ENSHCOP00000020891	GTP_EFTU_D2	PF03144.25	8.5e-09	1	1
ENSHCOP00000020896	GTP_EFTU_D2	PF03144.25	8.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005028	-	3799	XM_019857851	ENSHCOP00000020891	1122 (aa)	XP_019713410	-
ENSHCOT00000005069	-	3294	-	ENSHCOP00000005616	1097 (aa)	-	-
ENSHCOT00000005041	-	3937	XM_019857849	ENSHCOP00000020896	1122 (aa)	XP_019713408	-

Gene Model

Click here to download ENSHCOG00000007325's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007325	efl1	87	38.532	ENSHCOG00000001471	-	95	38.532
ENSHCOG00000007325	efl1	91	36.384	ENSHCOG00000001360	eef2b	98	36.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007325	efl1	99	67.982	ENSG00000140598	EFL1	97	74.930	Homo_sapiens
ENSHCOG00000007325	efl1	100	80.212	ENSAPOG00000000188	efl1	100	80.477	Acanthochromis_polyacanthus
ENSHCOG00000007325	efl1	99	67.606	ENSAMEG00000006031	EFL1	99	67.958	Ailuropoda_melanoleuca
ENSHCOG00000007325	efl1	100	81.616	ENSACIG00000017802	efl1	100	81.721	Amphilophus_citrinellus
ENSHCOG00000007325	efl1	100	79.503	ENSAOCG00000023933	efl1	100	79.769	Amphiprion_ocellaris
ENSHCOG00000007325	efl1	100	80.742	ENSAPEG00000000262	efl1	100	80.919	Amphiprion_percula
ENSHCOG00000007325	efl1	100	81.184	ENSATEG00000012373	efl1	100	81.184	Anabas_testudineus
ENSHCOG00000007325	efl1	99	70.432	ENSAPLG00000011147	EFL1	99	70.432	Anas_platyrhynchos
ENSHCOG00000007325	efl1	99	69.469	ENSACAG00000011040	EFL1	99	69.469	Anolis_carolinensis
ENSHCOG00000007325	efl1	99	67.603	ENSANAG00000027459	EFL1	99	67.954	Aotus_nancymaae
ENSHCOG00000007325	efl1	100	79.965	ENSACLG00000025780	efl1	100	80.142	Astatotilapia_calliptera
ENSHCOG00000007325	efl1	100	73.913	ENSAMXG00000019529	efl1	100	74.042	Astyanax_mexicanus
ENSHCOG00000007325	efl1	99	68.983	ENSBTAG00000003410	EFL1	99	68.983	Bos_taurus
ENSHCOG00000007325	efl1	99	31.574	WBGene00010732	K10C3.5	94	56.780	Caenorhabditis_elegans
ENSHCOG00000007325	efl1	84	88.889	ENSCJAG00000015607	-	93	88.889	Callithrix_jacchus
ENSHCOG00000007325	efl1	99	67.714	ENSCAFG00000013671	EFL1	99	67.714	Canis_familiaris
ENSHCOG00000007325	efl1	99	68.549	ENSCHIG00000001883	EFL1	99	68.549	Capra_hircus
ENSHCOG00000007325	efl1	99	67.372	ENSTSYG00000000348	EFL1	99	67.725	Carlito_syrichta
ENSHCOG00000007325	efl1	99	57.655	ENSCAPG00000017944	EFL1	99	57.655	Cavia_aperea
ENSHCOG00000007325	efl1	99	67.138	ENSCPOG00000001924	EFL1	99	67.580	Cavia_porcellus
ENSHCOG00000007325	efl1	99	68.226	ENSCCAG00000034450	EFL1	99	68.579	Cebus_capucinus
ENSHCOG00000007325	efl1	99	67.719	ENSCATG00000031678	-	99	67.982	Cercocebus_atys
ENSHCOG00000007325	efl1	99	67.077	ENSCLAG00000010155	EFL1	86	81.928	Chinchilla_lanigera
ENSHCOG00000007325	efl1	99	67.368	ENSCSAG00000015165	EFL1	99	67.632	Chlorocebus_sabaeus
ENSHCOG00000007325	efl1	74	66.606	ENSCHOG00000014029	EFL1	78	66.606	Choloepus_hoffmanni
ENSHCOG00000007325	efl1	99	69.826	ENSCPBG00000017638	EFL1	99	69.679	Chrysemys_picta_bellii
ENSHCOG00000007325	efl1	98	58.957	ENSCSAVG00000001787	-	99	60.460	Ciona_savignyi
ENSHCOG00000007325	efl1	99	67.895	ENSCANG00000038093	EFL1	99	68.158	Colobus_angolensis_palliatus
ENSHCOG00000007325	efl1	99	64.109	ENSCGRG00001010826	Efl1	99	64.519	Cricetulus_griseus_chok1gshd
ENSHCOG00000007325	efl1	99	66.814	ENSCGRG00000003273	Efl1	99	67.167	Cricetulus_griseus_crigri
ENSHCOG00000007325	efl1	99	75.798	ENSCSEG00000005856	efl1	99	75.975	Cynoglossus_semilaevis
ENSHCOG00000007325	efl1	93	74.452	ENSCVAG00000011863	efl1	95	74.166	Cyprinodon_variegatus
ENSHCOG00000007325	efl1	100	75.442	ENSDARG00000079672	efl1	98	75.618	Danio_rerio
ENSHCOG00000007325	efl1	99	68.458	ENSDNOG00000006097	EFL1	99	68.811	Dasypus_novemcinctus
ENSHCOG00000007325	efl1	99	66.550	ENSDORG00000000719	Efl1	99	66.900	Dipodomys_ordii
ENSHCOG00000007325	efl1	99	46.229	FBgn0053158	CG33158	99	46.318	Drosophila_melanogaster
ENSHCOG00000007325	efl1	88	64.317	ENSETEG00000004309	EFL1	95	65.198	Echinops_telfairi
ENSHCOG00000007325	efl1	90	65.275	ENSEBUG00000010738	efl1	100	68.065	Eptatretus_burgeri
ENSHCOG00000007325	efl1	99	67.668	ENSEASG00005007108	EFL1	99	68.021	Equus_asinus_asinus
ENSHCOG00000007325	efl1	95	66.728	ENSECAG00000016354	EFL1	99	67.097	Equus_caballus
ENSHCOG00000007325	efl1	70	71.470	ENSEEUG00000006326	EFL1	78	71.470	Erinaceus_europaeus
ENSHCOG00000007325	efl1	100	70.848	ENSELUG00000002520	efl1	99	80.339	Esox_lucius
ENSHCOG00000007325	efl1	99	68.449	ENSFCAG00000007741	EFL1	99	68.449	Felis_catus
ENSHCOG00000007325	efl1	99	69.432	ENSFALG00000011103	EFL1	99	69.432	Ficedula_albicollis
ENSHCOG00000007325	efl1	99	67.779	ENSFDAG00000009023	EFL1	93	79.310	Fukomys_damarensis
ENSHCOG00000007325	efl1	100	76.533	ENSFHEG00000017795	efl1	100	76.773	Fundulus_heteroclitus
ENSHCOG00000007325	efl1	99	73.595	ENSGMOG00000005041	efl1	100	73.595	Gadus_morhua
ENSHCOG00000007325	efl1	99	70.148	ENSGALG00000006225	EFL1	99	70.148	Gallus_gallus
ENSHCOG00000007325	efl1	100	77.100	ENSGACG00000012495	efl1	100	77.460	Gasterosteus_aculeatus
ENSHCOG00000007325	efl1	99	70.455	ENSGAGG00000022841	EFL1	99	70.455	Gopherus_agassizii
ENSHCOG00000007325	efl1	97	63.163	ENSGGOG00000005017	EFL1	100	63.432	Gorilla_gorilla
ENSHCOG00000007325	efl1	100	80.035	ENSHBUG00000022667	efl1	100	80.035	Haplochromis_burtoni
ENSHCOG00000007325	efl1	99	65.088	ENSHGLG00000011798	EFL1	99	65.175	Heterocephalus_glaber_female
ENSHCOG00000007325	efl1	99	67.632	ENSHGLG00100010319	EFTUD1	94	85.897	Heterocephalus_glaber_male
ENSHCOG00000007325	efl1	100	73.132	ENSIPUG00000023360	EFTUD1	100	73.132	Ictalurus_punctatus
ENSHCOG00000007325	efl1	99	64.737	ENSSTOG00000022945	EFL1	99	65.088	Ictidomys_tridecemlineatus
ENSHCOG00000007325	efl1	99	67.342	ENSJJAG00000018598	Efl1	99	67.694	Jaculus_jaculus
ENSHCOG00000007325	efl1	100	79.362	ENSLBEG00000015269	efl1	100	79.451	Labrus_bergylta
ENSHCOG00000007325	efl1	100	70.557	ENSLACG00000016121	EFL1	100	70.557	Latimeria_chalumnae
ENSHCOG00000007325	efl1	100	74.384	ENSLOCG00000012862	efl1	99	74.406	Lepisosteus_oculatus
ENSHCOG00000007325	efl1	99	66.696	ENSLAFG00000012504	EFL1	99	67.047	Loxodonta_africana
ENSHCOG00000007325	efl1	99	67.456	ENSMFAG00000032657	-	99	67.719	Macaca_fascicularis
ENSHCOG00000007325	efl1	99	65.503	ENSMMUG00000023353	EFL1	99	65.758	Macaca_mulatta
ENSHCOG00000007325	efl1	99	67.368	ENSMNEG00000041671	-	99	67.632	Macaca_nemestrina
ENSHCOG00000007325	efl1	99	67.456	ENSMLEG00000033735	EFL1	99	67.719	Mandrillus_leucophaeus
ENSHCOG00000007325	efl1	100	82.389	ENSMAMG00000011336	efl1	100	82.566	Mastacembelus_armatus
ENSHCOG00000007325	efl1	100	80.283	ENSMZEG00005003012	efl1	100	80.283	Maylandia_zebra
ENSHCOG00000007325	efl1	99	70.423	ENSMGAG00000007991	EFL1	99	70.423	Meleagris_gallopavo
ENSHCOG00000007325	efl1	99	67.049	ENSMAUG00000010709	Efl1	99	67.403	Mesocricetus_auratus
ENSHCOG00000007325	efl1	99	67.986	ENSMICG00000027853	EFL1	94	74.242	Microcebus_murinus
ENSHCOG00000007325	efl1	99	66.961	ENSMOCG00000007470	Efl1	99	67.314	Microtus_ochrogaster
ENSHCOG00000007325	efl1	100	72.582	ENSMMOG00000015370	efl1	100	73.026	Mola_mola
ENSHCOG00000007325	efl1	99	67.748	ENSMODG00000019386	EFL1	99	68.098	Monodelphis_domestica
ENSHCOG00000007325	efl1	100	79.682	ENSMALG00000018810	efl1	100	79.770	Monopterus_albus
ENSHCOG00000007325	efl1	99	67.286	MGP_CAROLIEiJ_G0029936	Efl1	98	79.412	Mus_caroli
ENSHCOG00000007325	efl1	99	67.665	ENSMUSG00000038563	Efl1	98	79.476	Mus_musculus
ENSHCOG00000007325	efl1	99	67.223	MGP_PahariEiJ_G0013157	Efl1	98	79.913	Mus_pahari
ENSHCOG00000007325	efl1	99	77.551	MGP_SPRETEiJ_G0031038	Efl1	99	77.551	Mus_spretus
ENSHCOG00000007325	efl1	99	67.338	ENSMPUG00000015494	EFL1	99	67.513	Mustela_putorius_furo
ENSHCOG00000007325	efl1	99	67.138	ENSNGAG00000017740	Efl1	99	67.491	Nannospalax_galili
ENSHCOG00000007325	efl1	93	66.573	ENSNLEG00000010679	EFL1	100	66.855	Nomascus_leucogenys
ENSHCOG00000007325	efl1	63	79.592	ENSMEUG00000012049	-	68	79.592	Notamacropus_eugenii
ENSHCOG00000007325	efl1	59	90.323	ENSOPRG00000012488	-	57	90.323	Ochotona_princeps
ENSHCOG00000007325	efl1	99	66.519	ENSODEG00000016193	EFL1	84	85.897	Octodon_degus
ENSHCOG00000007325	efl1	100	79.930	ENSONIG00000003394	efl1	100	80.018	Oreochromis_niloticus
ENSHCOG00000007325	efl1	99	67.982	ENSOCUG00000012163	EFL1	99	68.246	Oryctolagus_cuniculus
ENSHCOG00000007325	efl1	63	70.763	ENSORLG00000020390	efl1	100	71.610	Oryzias_latipes
ENSHCOG00000007325	efl1	100	75.445	ENSORLG00015012031	efl1	100	75.445	Oryzias_latipes_hsok
ENSHCOG00000007325	efl1	100	75.000	ENSOMEG00000022784	efl1	100	75.177	Oryzias_melastigma
ENSHCOG00000007325	efl1	99	68.522	ENSOARG00000014452	EFL1	99	68.522	Ovis_aries
ENSHCOG00000007325	efl1	99	63.333	ENSPPAG00000039672	EFL1	99	63.596	Pan_paniscus
ENSHCOG00000007325	efl1	99	68.926	ENSPPRG00000002193	EFL1	99	68.926	Panthera_pardus
ENSHCOG00000007325	efl1	99	68.486	ENSPTIG00000007053	EFL1	99	68.486	Panthera_tigris_altaica
ENSHCOG00000007325	efl1	99	67.982	ENSPTRG00000007374	EFL1	99	68.246	Pan_troglodytes
ENSHCOG00000007325	efl1	99	67.368	ENSPANG00000015635	-	98	67.632	Papio_anubis
ENSHCOG00000007325	efl1	99	73.232	ENSPKIG00000018456	efl1	99	73.321	Paramormyrops_kingsleyae
ENSHCOG00000007325	efl1	99	70.793	ENSPSIG00000007790	EFL1	99	70.793	Pelodiscus_sinensis
ENSHCOG00000007325	efl1	93	61.732	ENSPMAG00000002026	efl1	100	61.732	Petromyzon_marinus
ENSHCOG00000007325	efl1	99	68.134	ENSPCIG00000004372	EFL1	99	68.134	Phascolarctos_cinereus
ENSHCOG00000007325	efl1	100	76.690	ENSPFOG00000018687	efl1	100	76.690	Poecilia_formosa
ENSHCOG00000007325	efl1	100	76.690	ENSPLAG00000001988	efl1	100	76.690	Poecilia_latipinna
ENSHCOG00000007325	efl1	100	76.957	ENSPMEG00000000402	efl1	100	76.957	Poecilia_mexicana
ENSHCOG00000007325	efl1	100	77.620	ENSPREG00000022085	efl1	100	77.620	Poecilia_reticulata
ENSHCOG00000007325	efl1	99	67.895	ENSPPYG00000006724	EFL1	99	68.158	Pongo_abelii
ENSHCOG00000007325	efl1	99	68.134	ENSPVAG00000003189	EFL1	99	68.486	Pteropus_vampyrus
ENSHCOG00000007325	efl1	100	72.085	ENSPNYG00000019406	efl1	100	72.350	Pundamilia_nyererei
ENSHCOG00000007325	efl1	100	75.306	ENSPNAG00000012104	efl1	100	75.306	Pygocentrus_nattereri
ENSHCOG00000007325	efl1	99	67.401	ENSRNOG00000032723	Efl1	99	67.401	Rattus_norvegicus
ENSHCOG00000007325	efl1	99	67.372	ENSRBIG00000040576	EFL1	99	67.982	Rhinopithecus_bieti
ENSHCOG00000007325	efl1	99	67.417	ENSRROG00000031475	EFL1	99	67.687	Rhinopithecus_roxellana
ENSHCOG00000007325	efl1	96	50.922	YNL163C	RIA1	91	47.800	Saccharomyces_cerevisiae
ENSHCOG00000007325	efl1	99	67.961	ENSSBOG00000018280	EFL1	99	68.314	Saimiri_boliviensis_boliviensis
ENSHCOG00000007325	efl1	99	64.417	ENSSHAG00000018863	EFL1	99	64.768	Sarcophilus_harrisii
ENSHCOG00000007325	efl1	100	74.721	ENSSFOG00015016244	efl1	100	74.721	Scleropages_formosus
ENSHCOG00000007325	efl1	100	81.278	ENSSMAG00000016928	efl1	100	81.366	Scophthalmus_maximus
ENSHCOG00000007325	efl1	100	82.004	ENSSDUG00000013271	efl1	100	82.092	Seriola_dumerili
ENSHCOG00000007325	efl1	100	82.447	ENSSLDG00000014655	efl1	100	82.535	Seriola_lalandi_dorsalis
ENSHCOG00000007325	efl1	100	70.486	ENSSPUG00000000941	EFL1	100	70.486	Sphenodon_punctatus
ENSHCOG00000007325	efl1	100	82.285	ENSSPAG00000011885	efl1	100	82.462	Stegastes_partitus
ENSHCOG00000007325	efl1	99	68.430	ENSSSCG00000001792	EFL1	99	68.783	Sus_scrofa
ENSHCOG00000007325	efl1	99	70.988	ENSTGUG00000007850	EFL1	99	70.988	Taeniopygia_guttata
ENSHCOG00000007325	efl1	100	70.583	ENSTNIG00000003399	efl1	100	70.583	Tetraodon_nigroviridis
ENSHCOG00000007325	efl1	74	75.776	ENSTBEG00000011804	EFL1	78	75.776	Tupaia_belangeri
ENSHCOG00000007325	efl1	99	67.196	ENSTTRG00000011243	EFL1	99	67.549	Tursiops_truncatus
ENSHCOG00000007325	efl1	99	67.254	ENSUAMG00000022106	EFL1	99	67.606	Ursus_americanus
ENSHCOG00000007325	efl1	99	67.518	ENSUMAG00000010303	EFL1	99	67.870	Ursus_maritimus
ENSHCOG00000007325	efl1	90	79.498	ENSVPAG00000005735	EFL1	89	79.498	Vicugna_pacos
ENSHCOG00000007325	efl1	99	67.714	ENSVVUG00000004967	EFL1	99	67.714	Vulpes_vulpes
ENSHCOG00000007325	efl1	100	70.676	ENSXETG00000015701	EFL1	100	70.727	Xenopus_tropicalis
ENSHCOG00000007325	efl1	100	77.313	ENSXMAG00000023705	efl1	100	77.402	Xiphophorus_maculatus