EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007389 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4992 bases
Position: chrKV880076.1:167955-172946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005702	RVT_1	PF00078.27	9.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004933	-	3189	-	ENSHCOP00000005702	1062 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007389	-	93	52.480	ENSHCOG00000000471	-	83	52.480
ENSHCOG00000007389	-	94	55.755	ENSHCOG00000007436	-	99	55.755
ENSHCOG00000007389	-	98	79.412	ENSHCOG00000007397	-	97	79.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007389	-	76	39.114	ENSACIG00000009025	-	91	39.114	Amphilophus_citrinellus
ENSHCOG00000007389	-	89	34.266	ENSACIG00000010787	-	96	34.266	Amphilophus_citrinellus
ENSHCOG00000007389	-	94	32.327	ENSACIG00000012161	-	90	32.327	Amphilophus_citrinellus
ENSHCOG00000007389	-	76	39.902	ENSACIG00000013116	-	80	39.902	Amphilophus_citrinellus
ENSHCOG00000007389	-	94	34.870	ENSACIG00000007038	-	91	34.966	Amphilophus_citrinellus
ENSHCOG00000007389	-	87	45.854	ENSAMXG00000042811	-	83	45.854	Astyanax_mexicanus
ENSHCOG00000007389	-	88	41.219	ENSCPBG00000003842	-	71	41.219	Chrysemys_picta_bellii
ENSHCOG00000007389	-	94	32.490	ENSCVAG00000004138	-	98	32.490	Cyprinodon_variegatus
ENSHCOG00000007389	-	94	36.967	ENSELUG00000004597	-	97	37.019	Esox_lucius
ENSHCOG00000007389	-	98	30.399	ENSELUG00000004618	-	90	35.913	Esox_lucius
ENSHCOG00000007389	-	87	34.656	ENSFHEG00000007211	-	97	33.238	Fundulus_heteroclitus
ENSHCOG00000007389	-	93	33.167	ENSFHEG00000002853	-	90	33.167	Fundulus_heteroclitus
ENSHCOG00000007389	-	95	34.875	ENSFHEG00000022106	-	96	34.971	Fundulus_heteroclitus
ENSHCOG00000007389	-	94	30.246	ENSFHEG00000002865	-	90	30.246	Fundulus_heteroclitus
ENSHCOG00000007389	-	56	38.063	ENSGMOG00000005227	-	99	38.063	Gadus_morhua
ENSHCOG00000007389	-	62	37.264	ENSLBEG00000006732	-	79	37.264	Labrus_bergylta
ENSHCOG00000007389	-	67	36.616	ENSLBEG00000003745	-	85	36.616	Labrus_bergylta
ENSHCOG00000007389	-	62	37.264	ENSLBEG00000004576	-	80	37.264	Labrus_bergylta
ENSHCOG00000007389	-	73	34.336	ENSLACG00000006357	-	96	34.336	Latimeria_chalumnae
ENSHCOG00000007389	-	55	32.209	ENSLACG00000009240	-	100	32.209	Latimeria_chalumnae
ENSHCOG00000007389	-	50	42.272	ENSLOCG00000002743	-	100	42.272	Lepisosteus_oculatus
ENSHCOG00000007389	-	93	39.415	ENSLOCG00000017064	-	90	39.415	Lepisosteus_oculatus
ENSHCOG00000007389	-	93	38.537	ENSLOCG00000011928	-	90	38.537	Lepisosteus_oculatus
ENSHCOG00000007389	-	76	40.488	ENSMAMG00000019985	-	69	40.854	Mastacembelus_armatus
ENSHCOG00000007389	-	94	35.858	ENSONIG00000020875	-	89	35.858	Oreochromis_niloticus
ENSHCOG00000007389	-	76	33.414	ENSOMEG00000015368	-	99	30.057	Oryzias_melastigma
ENSHCOG00000007389	-	87	33.942	ENSPMGG00000017392	-	98	33.942	Periophthalmus_magnuspinnatus
ENSHCOG00000007389	-	82	36.079	ENSPMGG00000001593	-	89	36.079	Periophthalmus_magnuspinnatus
ENSHCOG00000007389	-	94	34.913	ENSPLAG00000022994	-	96	34.913	Poecilia_latipinna
ENSHCOG00000007389	-	93	34.055	ENSPLAG00000011817	-	99	34.154	Poecilia_latipinna
ENSHCOG00000007389	-	93	35.225	ENSPLAG00000011810	-	94	35.225	Poecilia_latipinna
ENSHCOG00000007389	-	78	36.396	ENSPLAG00000023379	-	99	36.396	Poecilia_latipinna
ENSHCOG00000007389	-	95	32.401	ENSPMEG00000008574	-	96	32.401	Poecilia_mexicana
ENSHCOG00000007389	-	94	34.843	ENSPMEG00000003431	-	96	34.843	Poecilia_mexicana
ENSHCOG00000007389	-	94	33.268	ENSPREG00000012484	-	90	33.268	Poecilia_reticulata
ENSHCOG00000007389	-	95	35.502	ENSPREG00000005756	-	94	35.502	Poecilia_reticulata
ENSHCOG00000007389	-	95	34.803	ENSPREG00000005456	-	89	34.803	Poecilia_reticulata
ENSHCOG00000007389	-	85	34.991	ENSPNAG00000014625	-	88	34.991	Pygocentrus_nattereri
ENSHCOG00000007389	-	86	39.878	ENSPNAG00000007038	-	79	39.711	Pygocentrus_nattereri
ENSHCOG00000007389	-	94	35.833	ENSPNAG00000016635	-	90	35.833	Pygocentrus_nattereri
ENSHCOG00000007389	-	78	38.222	ENSPNAG00000017596	-	88	38.222	Pygocentrus_nattereri
ENSHCOG00000007389	-	91	34.976	ENSPNAG00000021754	-	88	34.976	Pygocentrus_nattereri
ENSHCOG00000007389	-	94	34.577	ENSPNAG00000003539	-	90	34.577	Pygocentrus_nattereri
ENSHCOG00000007389	-	94	36.877	ENSXCOG00000013093	-	92	36.877	Xiphophorus_couchianus
ENSHCOG00000007389	-	76	37.901	ENSXCOG00000008881	-	90	37.901	Xiphophorus_couchianus
ENSHCOG00000007389	-	94	33.530	ENSXMAG00000028672	-	91	33.530	Xiphophorus_maculatus