EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007397 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9231 bases
Position: chrKV880076.1:156947-166177
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020936	RVT_1	PF00078.27	1.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004914	-	3384	-	ENSHCOP00000020936	1127 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007397	-	97	79.412	ENSHCOG00000007389	-	98	79.412
ENSHCOG00000007397	-	92	58.025	ENSHCOG00000007436	-	98	58.025
ENSHCOG00000007397	-	93	48.435	ENSHCOG00000000471	-	91	48.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007397	-	94	31.963	ENSACIG00000010787	-	96	31.963	Amphilophus_citrinellus
ENSHCOG00000007397	-	75	39.365	ENSACIG00000013116	-	83	39.365	Amphilophus_citrinellus
ENSHCOG00000007397	-	72	39.360	ENSACIG00000009025	-	91	39.360	Amphilophus_citrinellus
ENSHCOG00000007397	-	93	34.742	ENSACIG00000007038	-	90	35.061	Amphilophus_citrinellus
ENSHCOG00000007397	-	96	31.905	ENSACIG00000012161	-	93	31.905	Amphilophus_citrinellus
ENSHCOG00000007397	-	95	39.531	ENSAMXG00000042811	-	94	39.440	Astyanax_mexicanus
ENSHCOG00000007397	-	92	36.898	ENSCPBG00000003842	-	84	36.898	Chrysemys_picta_bellii
ENSHCOG00000007397	-	93	32.361	ENSCVAG00000004138	-	98	32.361	Cyprinodon_variegatus
ENSHCOG00000007397	-	86	36.025	ENSELUG00000004618	-	88	36.420	Esox_lucius
ENSHCOG00000007397	-	75	40.326	ENSELUG00000004597	-	87	40.326	Esox_lucius
ENSHCOG00000007397	-	92	30.614	ENSFHEG00000002865	-	88	30.614	Fundulus_heteroclitus
ENSHCOG00000007397	-	81	35.636	ENSFHEG00000002853	-	86	35.636	Fundulus_heteroclitus
ENSHCOG00000007397	-	82	39.294	ENSFHEG00000022106	-	86	39.294	Fundulus_heteroclitus
ENSHCOG00000007397	-	85	33.573	ENSFHEG00000007211	-	96	32.173	Fundulus_heteroclitus
ENSHCOG00000007397	-	53	39.566	ENSGMOG00000005227	-	99	39.566	Gadus_morhua
ENSHCOG00000007397	-	59	37.442	ENSLBEG00000006732	-	79	37.442	Labrus_bergylta
ENSHCOG00000007397	-	59	37.674	ENSLBEG00000004576	-	80	37.674	Labrus_bergylta
ENSHCOG00000007397	-	72	35.496	ENSLBEG00000003745	-	91	35.496	Labrus_bergylta
ENSHCOG00000007397	-	71	35.323	ENSLACG00000006357	-	99	35.323	Latimeria_chalumnae
ENSHCOG00000007397	-	52	33.165	ENSLACG00000009240	-	100	33.165	Latimeria_chalumnae
ENSHCOG00000007397	-	93	36.054	ENSLOCG00000017064	-	98	36.054	Lepisosteus_oculatus
ENSHCOG00000007397	-	84	38.624	ENSLOCG00000011928	-	96	38.624	Lepisosteus_oculatus
ENSHCOG00000007397	-	93	35.358	ENSMAMG00000019985	-	91	35.630	Mastacembelus_armatus
ENSHCOG00000007397	-	93	36.758	ENSONIG00000020875	-	89	36.758	Oreochromis_niloticus
ENSHCOG00000007397	-	93	31.063	ENSOMEG00000015368	-	99	31.128	Oryzias_melastigma
ENSHCOG00000007397	-	86	32.958	ENSPMGG00000017392	-	98	32.958	Periophthalmus_magnuspinnatus
ENSHCOG00000007397	-	54	37.931	ENSPMGG00000001593	-	62	37.931	Periophthalmus_magnuspinnatus
ENSHCOG00000007397	-	72	37.679	ENSPLAG00000023379	-	98	37.679	Poecilia_latipinna
ENSHCOG00000007397	-	92	33.866	ENSPLAG00000011817	-	99	33.960	Poecilia_latipinna
ENSHCOG00000007397	-	91	36.023	ENSPLAG00000011810	-	93	36.023	Poecilia_latipinna
ENSHCOG00000007397	-	92	35.613	ENSPLAG00000022994	-	95	35.613	Poecilia_latipinna
ENSHCOG00000007397	-	94	32.166	ENSPMEG00000008574	-	96	32.166	Poecilia_mexicana
ENSHCOG00000007397	-	92	34.278	ENSPMEG00000003431	-	95	34.496	Poecilia_mexicana
ENSHCOG00000007397	-	93	33.616	ENSPREG00000012484	-	90	33.553	Poecilia_reticulata
ENSHCOG00000007397	-	94	34.206	ENSPREG00000005756	-	94	34.206	Poecilia_reticulata
ENSHCOG00000007397	-	94	34.257	ENSPREG00000005456	-	89	34.257	Poecilia_reticulata
ENSHCOG00000007397	-	85	34.991	ENSPNAG00000014625	-	88	34.991	Pygocentrus_nattereri
ENSHCOG00000007397	-	93	35.630	ENSPNAG00000003539	-	90	35.630	Pygocentrus_nattereri
ENSHCOG00000007397	-	93	35.945	ENSPNAG00000007038	-	91	36.247	Pygocentrus_nattereri
ENSHCOG00000007397	-	93	35.143	ENSPNAG00000016635	-	90	35.143	Pygocentrus_nattereri
ENSHCOG00000007397	-	90	36.218	ENSPNAG00000021754	-	88	36.218	Pygocentrus_nattereri
ENSHCOG00000007397	-	80	36.559	ENSPNAG00000017596	-	90	36.559	Pygocentrus_nattereri
ENSHCOG00000007397	-	92	38.266	ENSXCOG00000013093	-	92	38.266	Xiphophorus_couchianus
ENSHCOG00000007397	-	72	38.889	ENSXCOG00000008881	-	92	38.889	Xiphophorus_couchianus
ENSHCOG00000007397	-	93	34.078	ENSXMAG00000028672	-	91	34.078	Xiphophorus_maculatus