EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007444 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3 (1 of many)
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 151165 bases
Position: chrKV880313.1:1120420-1271584
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020961	Fox-1_C	PF12414.8	1.8e-28	1	1
ENSHCOP00000020961	RRM_1	PF00076.22	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004865	RBFOX3 (1 of many)-201	1146	-	ENSHCOP00000020961	381 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007444	RBFOX3	83	52.537	ENSHCOG00000020771	rbfox1l	82	54.313
ENSHCOG00000007444	RBFOX3	78	67.550	ENSHCOG00000001863	RBFOX3	90	67.638
ENSHCOG00000007444	RBFOX3	58	60.000	ENSHCOG00000016102	rbfox2	55	61.111
ENSHCOG00000007444	RBFOX3	64	56.207	ENSHCOG00000005662	-	65	56.207
ENSHCOG00000007444	RBFOX3	80	61.801	ENSHCOG00000016419	rbfox1	90	61.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007444	RBFOX3	77	76.923	ENSG00000167281	RBFOX3	96	76.589	Homo_sapiens
ENSHCOG00000007444	RBFOX3	94	80.811	ENSAPOG00000021630	rbfox3b	96	79.235	Acanthochromis_polyacanthus
ENSHCOG00000007444	RBFOX3	82	63.208	ENSAPOG00000015658	-	81	68.794	Acanthochromis_polyacanthus
ENSHCOG00000007444	RBFOX3	77	72.468	ENSAMEG00000014170	RBFOX3	81	72.327	Ailuropoda_melanoleuca
ENSHCOG00000007444	RBFOX3	81	79.495	ENSACIG00000010817	rbfox3b	95	81.063	Amphilophus_citrinellus
ENSHCOG00000007444	RBFOX3	67	68.953	ENSACIG00000003768	-	72	71.318	Amphilophus_citrinellus
ENSHCOG00000007444	RBFOX3	76	77.027	ENSAOCG00000010786	-	77	76.846	Amphiprion_ocellaris
ENSHCOG00000007444	RBFOX3	93	81.644	ENSAOCG00000012358	rbfox3b	98	80.055	Amphiprion_ocellaris
ENSHCOG00000007444	RBFOX3	76	68.239	ENSAPEG00000015891	-	79	68.438	Amphiprion_percula
ENSHCOG00000007444	RBFOX3	83	74.383	ENSAPEG00000019081	rbfox3b	81	76.066	Amphiprion_percula
ENSHCOG00000007444	RBFOX3	81	74.000	ENSATEG00000019945	rbfox3b	96	74.775	Anabas_testudineus
ENSHCOG00000007444	RBFOX3	78	72.964	ENSATEG00000023101	-	94	72.168	Anabas_testudineus
ENSHCOG00000007444	RBFOX3	77	76.000	ENSACAG00000016093	RBFOX3	84	77.333	Anolis_carolinensis
ENSHCOG00000007444	RBFOX3	76	76.431	ENSANAG00000023457	RBFOX3	96	76.254	Aotus_nancymaae
ENSHCOG00000007444	RBFOX3	82	72.188	ENSACLG00000025552	-	82	74.086	Astatotilapia_calliptera
ENSHCOG00000007444	RBFOX3	94	79.245	ENSACLG00000020011	rbfox3b	95	84.000	Astatotilapia_calliptera
ENSHCOG00000007444	RBFOX3	93	70.109	ENSAMXG00000042841	rbfox3b	85	76.744	Astyanax_mexicanus
ENSHCOG00000007444	RBFOX3	95	73.670	ENSAMXG00000037246	rbfox3a	98	73.138	Astyanax_mexicanus
ENSHCOG00000007444	RBFOX3	65	82.400	ENSBTAG00000006280	RBFOX3	96	57.803	Bos_taurus
ENSHCOG00000007444	RBFOX3	77	72.391	ENSCJAG00000009563	RBFOX3	89	73.244	Callithrix_jacchus
ENSHCOG00000007444	RBFOX3	62	82.008	ENSCAFG00000005547	RBFOX3	85	81.857	Canis_familiaris
ENSHCOG00000007444	RBFOX3	77	65.797	ENSCAFG00020008126	RBFOX3	94	65.527	Canis_lupus_dingo
ENSHCOG00000007444	RBFOX3	78	64.756	ENSCHIG00000009124	RBFOX3	94	65.527	Capra_hircus
ENSHCOG00000007444	RBFOX3	76	65.698	ENSTSYG00000029617	RBFOX3	96	66.474	Carlito_syrichta
ENSHCOG00000007444	RBFOX3	78	64.045	ENSCPOG00000021703	RBFOX3	96	65.616	Cavia_porcellus
ENSHCOG00000007444	RBFOX3	76	76.431	ENSCCAG00000028450	RBFOX3	96	76.254	Cebus_capucinus
ENSHCOG00000007444	RBFOX3	76	76.768	ENSCATG00000018349	RBFOX3	96	76.589	Cercocebus_atys
ENSHCOG00000007444	RBFOX3	78	64.407	ENSCLAG00000006449	RBFOX3	96	65.994	Chinchilla_lanigera
ENSHCOG00000007444	RBFOX3	76	76.768	ENSCSAG00000002355	RBFOX3	96	76.589	Chlorocebus_sabaeus
ENSHCOG00000007444	RBFOX3	78	76.333	ENSCPBG00000010904	RBFOX3	95	76.846	Chrysemys_picta_bellii
ENSHCOG00000007444	RBFOX3	76	76.768	ENSCANG00000043120	RBFOX3	96	76.589	Colobus_angolensis_palliatus
ENSHCOG00000007444	RBFOX3	78	62.963	ENSCGRG00001019476	Rbfox3	96	64.368	Cricetulus_griseus_chok1gshd
ENSHCOG00000007444	RBFOX3	78	62.963	ENSCGRG00000003268	Rbfox3	96	64.368	Cricetulus_griseus_crigri
ENSHCOG00000007444	RBFOX3	85	65.588	ENSCSEG00000020606	RBFOX3	86	70.169	Cynoglossus_semilaevis
ENSHCOG00000007444	RBFOX3	93	70.330	ENSCSEG00000015567	RBFOX3	96	71.547	Cynoglossus_semilaevis
ENSHCOG00000007444	RBFOX3	93	81.644	ENSCVAG00000006882	rbfox3b	98	80.055	Cyprinodon_variegatus
ENSHCOG00000007444	RBFOX3	93	73.442	ENSDARG00000010083	rbfox3a	97	72.826	Danio_rerio
ENSHCOG00000007444	RBFOX3	79	73.770	ENSDARG00000074310	rbfox3b	96	71.875	Danio_rerio
ENSHCOG00000007444	RBFOX3	66	63.430	ENSDNOG00000039391	RBFOX3	51	80.526	Dasypus_novemcinctus
ENSHCOG00000007444	RBFOX3	78	57.925	ENSDORG00000005352	Rbfox3	94	58.739	Dipodomys_ordii
ENSHCOG00000007444	RBFOX3	59	63.478	ENSEBUG00000013559	RBFOX3	73	59.004	Eptatretus_burgeri
ENSHCOG00000007444	RBFOX3	79	64.062	ENSEBUG00000002129	RBFOX3	90	63.240	Eptatretus_burgeri
ENSHCOG00000007444	RBFOX3	76	76.923	ENSEASG00005005059	RBFOX3	96	76.744	Equus_asinus_asinus
ENSHCOG00000007444	RBFOX3	77	76.744	ENSECAG00000023811	RBFOX3	96	76.412	Equus_caballus
ENSHCOG00000007444	RBFOX3	69	75.521	ENSEEUG00000013974	RBFOX3	70	75.258	Erinaceus_europaeus
ENSHCOG00000007444	RBFOX3	94	78.495	ENSELUG00000017963	rbfox3b	98	77.839	Esox_lucius
ENSHCOG00000007444	RBFOX3	78	75.166	ENSFCAG00000002555	RBFOX3	96	75.920	Felis_catus
ENSHCOG00000007444	RBFOX3	78	61.905	ENSFALG00000012288	RBFOX3	83	62.090	Ficedula_albicollis
ENSHCOG00000007444	RBFOX3	78	58.708	ENSFDAG00000007489	RBFOX3	96	60.172	Fukomys_damarensis
ENSHCOG00000007444	RBFOX3	81	73.502	ENSFHEG00000008550	rbfox3b	95	74.333	Fundulus_heteroclitus
ENSHCOG00000007444	RBFOX3	62	67.119	ENSGMOG00000019304	-	95	62.928	Gadus_morhua
ENSHCOG00000007444	RBFOX3	77	79.195	ENSGALG00000032889	RBFOX3	83	78.859	Gallus_gallus
ENSHCOG00000007444	RBFOX3	94	79.235	ENSGAFG00000005025	rbfox3b	99	79.282	Gambusia_affinis
ENSHCOG00000007444	RBFOX3	78	63.277	ENSGACG00000002138	-	94	63.202	Gasterosteus_aculeatus
ENSHCOG00000007444	RBFOX3	78	76.333	ENSGAGG00000020025	RBFOX3	95	76.846	Gopherus_agassizii
ENSHCOG00000007444	RBFOX3	76	76.768	ENSGGOG00000012546	RBFOX3	96	76.589	Gorilla_gorilla
ENSHCOG00000007444	RBFOX3	94	79.459	ENSHBUG00000018099	rbfox3b	98	79.778	Haplochromis_burtoni
ENSHCOG00000007444	RBFOX3	86	69.436	ENSHBUG00000023098	-	88	73.529	Haplochromis_burtoni
ENSHCOG00000007444	RBFOX3	78	63.687	ENSHGLG00000008679	RBFOX3	96	64.957	Heterocephalus_glaber_female
ENSHCOG00000007444	RBFOX3	78	62.254	ENSHGLG00100014739	RBFOX3	80	76.569	Heterocephalus_glaber_male
ENSHCOG00000007444	RBFOX3	94	70.588	ENSIPUG00000012010	rbfox3a	97	70.652	Ictalurus_punctatus
ENSHCOG00000007444	RBFOX3	80	70.326	ENSIPUG00000021966	rbfox3b	88	81.702	Ictalurus_punctatus
ENSHCOG00000007444	RBFOX3	78	59.609	ENSSTOG00000026817	RBFOX3	95	59.539	Ictidomys_tridecemlineatus
ENSHCOG00000007444	RBFOX3	78	63.897	ENSJJAG00000014167	Rbfox3	96	65.896	Jaculus_jaculus
ENSHCOG00000007444	RBFOX3	93	81.644	ENSKMAG00000006726	rbfox3b	98	80.055	Kryptolebias_marmoratus
ENSHCOG00000007444	RBFOX3	93	73.514	ENSLBEG00000022508	-	88	72.527	Labrus_bergylta
ENSHCOG00000007444	RBFOX3	83	81.040	ENSLBEG00000004030	rbfox3b	95	80.399	Labrus_bergylta
ENSHCOG00000007444	RBFOX3	77	65.758	ENSLACG00000018409	-	85	65.766	Latimeria_chalumnae
ENSHCOG00000007444	RBFOX3	76	80.333	ENSLOCG00000012267	rbfox3a	91	80.132	Lepisosteus_oculatus
ENSHCOG00000007444	RBFOX3	77	70.031	ENSLAFG00000016623	RBFOX3	94	66.097	Loxodonta_africana
ENSHCOG00000007444	RBFOX3	79	67.139	ENSMFAG00000002247	RBFOX3	96	66.377	Macaca_fascicularis
ENSHCOG00000007444	RBFOX3	76	76.768	ENSMMUG00000023028	RBFOX3	96	76.589	Macaca_mulatta
ENSHCOG00000007444	RBFOX3	76	76.431	ENSMNEG00000041147	RBFOX3	96	76.254	Macaca_nemestrina
ENSHCOG00000007444	RBFOX3	76	76.768	ENSMLEG00000025686	RBFOX3	96	76.589	Mandrillus_leucophaeus
ENSHCOG00000007444	RBFOX3	81	78.526	ENSMAMG00000019810	rbfox3b	95	80.068	Mastacembelus_armatus
ENSHCOG00000007444	RBFOX3	78	72.549	ENSMAMG00000020600	-	87	72.403	Mastacembelus_armatus
ENSHCOG00000007444	RBFOX3	94	79.459	ENSMZEG00005000781	rbfox3b	96	78.962	Maylandia_zebra
ENSHCOG00000007444	RBFOX3	66	59.441	ENSMZEG00005003055	-	54	87.903	Maylandia_zebra
ENSHCOG00000007444	RBFOX3	78	63.099	ENSMAUG00000013543	Rbfox3	96	64.655	Mesocricetus_auratus
ENSHCOG00000007444	RBFOX3	78	75.490	ENSMICG00000014898	RBFOX3	96	76.254	Microcebus_murinus
ENSHCOG00000007444	RBFOX3	78	63.429	ENSMOCG00000015373	Rbfox3	96	64.553	Microtus_ochrogaster
ENSHCOG00000007444	RBFOX3	93	83.102	ENSMMOG00000020193	rbfox3b	99	78.356	Mola_mola
ENSHCOG00000007444	RBFOX3	76	76.871	ENSMODG00000002089	RBFOX3	83	76.174	Monodelphis_domestica
ENSHCOG00000007444	RBFOX3	93	80.000	ENSMALG00000020407	rbfox3b	98	78.393	Monopterus_albus
ENSHCOG00000007444	RBFOX3	94	72.358	ENSMALG00000018270	-	95	71.935	Monopterus_albus
ENSHCOG00000007444	RBFOX3	78	74.257	MGP_CAROLIEiJ_G0017487	Rbfox3	96	89.928	Mus_caroli
ENSHCOG00000007444	RBFOX3	78	74.587	ENSMUSG00000025576	Rbfox3	96	89.928	Mus_musculus
ENSHCOG00000007444	RBFOX3	78	74.671	MGP_PahariEiJ_G0018614	Rbfox3	96	90.647	Mus_pahari
ENSHCOG00000007444	RBFOX3	78	74.587	MGP_SPRETEiJ_G0018331	Rbfox3	96	89.928	Mus_spretus
ENSHCOG00000007444	RBFOX3	78	67.552	ENSMPUG00000012319	RBFOX3	89	67.449	Mustela_putorius_furo
ENSHCOG00000007444	RBFOX3	78	64.286	ENSNGAG00000018006	Rbfox3	96	65.706	Nannospalax_galili
ENSHCOG00000007444	RBFOX3	86	67.470	ENSNBRG00000022885	-	82	71.761	Neolamprologus_brichardi
ENSHCOG00000007444	RBFOX3	93	79.670	ENSNBRG00000010102	rbfox3b	98	79.387	Neolamprologus_brichardi
ENSHCOG00000007444	RBFOX3	69	84.615	ENSMEUG00000004218	-	75	84.615	Notamacropus_eugenii
ENSHCOG00000007444	RBFOX3	57	76.074	ENSOPRG00000016279	-	64	75.758	Ochotona_princeps
ENSHCOG00000007444	RBFOX3	76	76.159	ENSODEG00000009433	RBFOX3	96	76.333	Octodon_degus
ENSHCOG00000007444	RBFOX3	93	81.644	ENSONIG00000009549	rbfox3b	98	80.055	Oreochromis_niloticus
ENSHCOG00000007444	RBFOX3	82	72.188	ENSONIG00000007282	-	87	74.086	Oreochromis_niloticus
ENSHCOG00000007444	RBFOX3	65	55.593	ENSOCUG00000014217	RBFOX3	82	55.405	Oryctolagus_cuniculus
ENSHCOG00000007444	RBFOX3	94	80.541	ENSORLG00000000905	rbfox3b	69	79.945	Oryzias_latipes
ENSHCOG00000007444	RBFOX3	94	80.541	ENSORLG00020018030	rbfox3b	98	76.190	Oryzias_latipes_hni
ENSHCOG00000007444	RBFOX3	93	81.370	ENSORLG00015009200	rbfox3b	98	79.778	Oryzias_latipes_hsok
ENSHCOG00000007444	RBFOX3	74	79.479	ENSOMEG00000014677	rbfox3b	84	78.261	Oryzias_melastigma
ENSHCOG00000007444	RBFOX3	79	73.941	ENSOGAG00000029595	RBFOX3	82	73.786	Otolemur_garnettii
ENSHCOG00000007444	RBFOX3	73	54.839	ENSOARG00000002908	RBFOX3	80	56.311	Ovis_aries
ENSHCOG00000007444	RBFOX3	65	82.000	ENSPPAG00000025383	RBFOX3	88	81.746	Pan_paniscus
ENSHCOG00000007444	RBFOX3	76	64.985	ENSPPRG00000007819	RBFOX3	96	66.667	Panthera_pardus
ENSHCOG00000007444	RBFOX3	76	76.768	ENSPTRG00000009727	RBFOX3	96	76.589	Pan_troglodytes
ENSHCOG00000007444	RBFOX3	76	76.768	ENSPANG00000019837	RBFOX3	96	76.589	Papio_anubis
ENSHCOG00000007444	RBFOX3	84	64.220	ENSPKIG00000022633	-	82	64.610	Paramormyrops_kingsleyae
ENSHCOG00000007444	RBFOX3	94	75.202	ENSPKIG00000010299	rbfox3a	91	79.114	Paramormyrops_kingsleyae
ENSHCOG00000007444	RBFOX3	70	83.088	ENSPMGG00000008000	rbfox3b	78	87.402	Periophthalmus_magnuspinnatus
ENSHCOG00000007444	RBFOX3	78	64.000	ENSPEMG00000010500	Rbfox3	96	65.130	Peromyscus_maniculatus_bairdii
ENSHCOG00000007444	RBFOX3	76	66.667	ENSPCIG00000005766	RBFOX3	96	65.797	Phascolarctos_cinereus
ENSHCOG00000007444	RBFOX3	94	80.811	ENSPFOG00000018294	rbfox3b	96	79.235	Poecilia_formosa
ENSHCOG00000007444	RBFOX3	62	80.816	ENSPLAG00000000481	rbfox3b	75	81.070	Poecilia_latipinna
ENSHCOG00000007444	RBFOX3	81	73.502	ENSPMEG00000022997	rbfox3b	95	74.333	Poecilia_mexicana
ENSHCOG00000007444	RBFOX3	93	79.348	ENSPREG00000012886	rbfox3b	98	79.452	Poecilia_reticulata
ENSHCOG00000007444	RBFOX3	65	75.200	ENSPPYG00000008704	RBFOX3	74	75.000	Pongo_abelii
ENSHCOG00000007444	RBFOX3	76	63.343	ENSPCAG00000001401	RBFOX3	96	64.058	Procavia_capensis
ENSHCOG00000007444	RBFOX3	80	64.641	ENSPCOG00000012689	RBFOX3	97	66.377	Propithecus_coquereli
ENSHCOG00000007444	RBFOX3	76	56.686	ENSPVAG00000015243	RBFOX3	96	58.382	Pteropus_vampyrus
ENSHCOG00000007444	RBFOX3	94	68.579	ENSPNYG00000009079	-	95	67.120	Pundamilia_nyererei
ENSHCOG00000007444	RBFOX3	83	74.688	ENSPNYG00000010414	rbfox3b	80	76.412	Pundamilia_nyererei
ENSHCOG00000007444	RBFOX3	79	61.842	ENSPNAG00000018173	rbfox3b	86	63.946	Pygocentrus_nattereri
ENSHCOG00000007444	RBFOX3	93	73.713	ENSPNAG00000002889	rbfox3a	98	73.171	Pygocentrus_nattereri
ENSHCOG00000007444	RBFOX3	76	75.585	ENSRNOG00000003386	Rbfox3	96	75.415	Rattus_norvegicus
ENSHCOG00000007444	RBFOX3	76	76.768	ENSRBIG00000040449	RBFOX3	83	76.589	Rhinopithecus_bieti
ENSHCOG00000007444	RBFOX3	76	76.768	ENSRROG00000000766	RBFOX3	96	76.589	Rhinopithecus_roxellana
ENSHCOG00000007444	RBFOX3	76	76.431	ENSSBOG00000031591	RBFOX3	96	76.254	Saimiri_boliviensis_boliviensis
ENSHCOG00000007444	RBFOX3	76	69.113	ENSSHAG00000016076	RBFOX3	95	66.107	Sarcophilus_harrisii
ENSHCOG00000007444	RBFOX3	77	68.852	ENSSFOG00015004716	RBFOX3	85	68.627	Scleropages_formosus
ENSHCOG00000007444	RBFOX3	94	74.124	ENSSFOG00015023260	rbfox3a	98	74.590	Scleropages_formosus
ENSHCOG00000007444	RBFOX3	94	76.486	ENSSMAG00000012618	rbfox3b	85	76.720	Scophthalmus_maximus
ENSHCOG00000007444	RBFOX3	79	75.161	ENSSMAG00000019052	-	96	75.748	Scophthalmus_maximus
ENSHCOG00000007444	RBFOX3	95	66.486	ENSSDUG00000015801	-	99	66.667	Seriola_dumerili
ENSHCOG00000007444	RBFOX3	81	73.502	ENSSDUG00000023183	rbfox3b	95	74.333	Seriola_dumerili
ENSHCOG00000007444	RBFOX3	93	81.644	ENSSLDG00000000149	rbfox3b	98	80.055	Seriola_lalandi_dorsalis
ENSHCOG00000007444	RBFOX3	95	69.459	ENSSLDG00000016098	-	99	70.380	Seriola_lalandi_dorsalis
ENSHCOG00000007444	RBFOX3	77	78.595	ENSSPUG00000011733	RBFOX3	96	78.146	Sphenodon_punctatus
ENSHCOG00000007444	RBFOX3	83	73.602	ENSSPAG00000017571	rbfox3b	80	75.415	Stegastes_partitus
ENSHCOG00000007444	RBFOX3	65	74.104	ENSSPAG00000004898	-	74	73.913	Stegastes_partitus
ENSHCOG00000007444	RBFOX3	74	75.958	ENSSSCG00000039498	RBFOX3	97	66.149	Sus_scrofa
ENSHCOG00000007444	RBFOX3	83	79.257	ENSTRUG00000004894	rbfox3b	87	80.892	Takifugu_rubripes
ENSHCOG00000007444	RBFOX3	85	72.404	ENSTNIG00000011278	rbfox3b	84	74.556	Tetraodon_nigroviridis
ENSHCOG00000007444	RBFOX3	76	60.641	ENSTTRG00000003676	RBFOX3	96	61.449	Tursiops_truncatus
ENSHCOG00000007444	RBFOX3	76	77.104	ENSUAMG00000004668	RBFOX3	96	76.923	Ursus_americanus
ENSHCOG00000007444	RBFOX3	78	75.828	ENSVVUG00000017864	RBFOX3	96	76.589	Vulpes_vulpes
ENSHCOG00000007444	RBFOX3	82	59.942	ENSXETG00000020236	rbfox3	81	60.870	Xenopus_tropicalis
ENSHCOG00000007444	RBFOX3	93	80.548	ENSXCOG00000018262	rbfox3b	99	79.167	Xiphophorus_couchianus
ENSHCOG00000007444	RBFOX3	94	80.811	ENSXMAG00000012939	rbfox3b	98	80.055	Xiphophorus_maculatus