EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007481 (Gene tree)
Gene ID: 109527712
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4613 bases
Position: chrKV880313.1:997155-1001767
Accession: 109527712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020986	tRNA_int_end_N2	PF12928.7	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004774	-	2197	XM_019889768	ENSHCOP00000020986	405 (aa)	XP_019745327	-

Gene Model

Click here to download ENSHCOG00000007481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007481	tsen54	99	41.898	ENSG00000182173	TSEN54	99	61.972	Homo_sapiens
ENSHCOG00000007481	tsen54	100	68.116	ENSAPOG00000009659	tsen54	100	68.116	Acanthochromis_polyacanthus
ENSHCOG00000007481	tsen54	99	40.698	ENSAMEG00000009414	TSEN54	81	42.290	Ailuropoda_melanoleuca
ENSHCOG00000007481	tsen54	100	67.874	ENSAOCG00000000152	tsen54	79	67.874	Amphiprion_ocellaris
ENSHCOG00000007481	tsen54	100	67.391	ENSAPEG00000018931	tsen54	79	67.391	Amphiprion_percula
ENSHCOG00000007481	tsen54	100	63.426	ENSATEG00000019860	tsen54	81	64.120	Anabas_testudineus
ENSHCOG00000007481	tsen54	99	43.823	ENSAPLG00000009419	TSEN54	94	43.823	Anas_platyrhynchos
ENSHCOG00000007481	tsen54	100	42.022	ENSACAG00000006714	TSEN54	82	42.956	Anolis_carolinensis
ENSHCOG00000007481	tsen54	99	40.741	ENSANAG00000024061	TSEN54	80	41.882	Aotus_nancymaae
ENSHCOG00000007481	tsen54	100	63.915	ENSACLG00000019800	tsen54	81	63.679	Astatotilapia_calliptera
ENSHCOG00000007481	tsen54	99	52.913	ENSAMXG00000006546	tsen54	80	52.913	Astyanax_mexicanus
ENSHCOG00000007481	tsen54	68	63.529	ENSBTAG00000000824	TSEN54	80	40.888	Bos_taurus
ENSHCOG00000007481	tsen54	99	40.547	ENSCJAG00000014278	TSEN54	80	42.019	Callithrix_jacchus
ENSHCOG00000007481	tsen54	99	41.284	ENSCAFG00000004798	TSEN54	81	42.890	Canis_familiaris
ENSHCOG00000007481	tsen54	99	41.284	ENSCAFG00020000312	TSEN54	81	42.890	Canis_lupus_dingo
ENSHCOG00000007481	tsen54	99	41.958	ENSCHIG00000019908	TSEN54	80	41.801	Capra_hircus
ENSHCOG00000007481	tsen54	99	40.826	ENSTSYG00000037439	TSEN54	94	42.361	Carlito_syrichta
ENSHCOG00000007481	tsen54	99	41.839	ENSCCAG00000036624	TSEN54	80	41.882	Cebus_capucinus
ENSHCOG00000007481	tsen54	99	42.791	ENSCATG00000042877	TSEN54	80	43.224	Cercocebus_atys
ENSHCOG00000007481	tsen54	99	42.019	ENSCLAG00000002924	TSEN54	80	42.019	Chinchilla_lanigera
ENSHCOG00000007481	tsen54	99	41.667	ENSCSAG00000004809	TSEN54	80	43.224	Chlorocebus_sabaeus
ENSHCOG00000007481	tsen54	99	43.694	ENSCPBG00000028071	TSEN54	82	43.919	Chrysemys_picta_bellii
ENSHCOG00000007481	tsen54	99	42.326	ENSCANG00000028053	TSEN54	80	42.558	Colobus_angolensis_palliatus
ENSHCOG00000007481	tsen54	99	40.793	ENSCGRG00001020029	Tsen54	80	40.793	Cricetulus_griseus_chok1gshd
ENSHCOG00000007481	tsen54	99	40.793	ENSCGRG00000016289	Tsen54	95	40.793	Cricetulus_griseus_crigri
ENSHCOG00000007481	tsen54	99	56.386	ENSCSEG00000020586	tsen54	99	56.386	Cynoglossus_semilaevis
ENSHCOG00000007481	tsen54	99	55.746	ENSDARG00000036844	tsen54	100	56.618	Danio_rerio
ENSHCOG00000007481	tsen54	99	40.984	ENSDORG00000004073	Tsen54	80	41.686	Dipodomys_ordii
ENSHCOG00000007481	tsen54	99	42.691	ENSEASG00005000579	TSEN54	81	42.691	Equus_asinus_asinus
ENSHCOG00000007481	tsen54	99	42.227	ENSECAG00000004924	TSEN54	81	42.227	Equus_caballus
ENSHCOG00000007481	tsen54	99	41.435	ENSEEUG00000008467	TSEN54	94	41.725	Erinaceus_europaeus
ENSHCOG00000007481	tsen54	99	53.288	ENSELUG00000017703	tsen54	75	53.515	Esox_lucius
ENSHCOG00000007481	tsen54	99	41.149	ENSFCAG00000023712	TSEN54	81	43.357	Felis_catus
ENSHCOG00000007481	tsen54	99	43.021	ENSFALG00000001119	TSEN54	80	44.773	Ficedula_albicollis
ENSHCOG00000007481	tsen54	99	42.155	ENSFDAG00000019090	TSEN54	93	42.389	Fukomys_damarensis
ENSHCOG00000007481	tsen54	100	66.265	ENSFHEG00000005470	tsen54	80	65.783	Fundulus_heteroclitus
ENSHCOG00000007481	tsen54	99	41.849	ENSGMOG00000013146	tsen54	83	42.298	Gadus_morhua
ENSHCOG00000007481	tsen54	99	41.475	ENSGALG00000047163	TSEN54	84	41.475	Gallus_gallus
ENSHCOG00000007481	tsen54	100	63.725	ENSGAFG00000005111	tsen54	80	63.971	Gambusia_affinis
ENSHCOG00000007481	tsen54	100	60.775	ENSGACG00000014987	tsen54	82	60.048	Gasterosteus_aculeatus
ENSHCOG00000007481	tsen54	99	44.820	ENSGAGG00000006825	TSEN54	80	44.820	Gopherus_agassizii
ENSHCOG00000007481	tsen54	99	41.898	ENSGGOG00000009417	TSEN54	83	43.458	Gorilla_gorilla
ENSHCOG00000007481	tsen54	91	61.183	ENSHBUG00000018296	tsen54	98	55.779	Haplochromis_burtoni
ENSHCOG00000007481	tsen54	99	41.705	ENSHGLG00000007979	TSEN54	80	41.705	Heterocephalus_glaber_female
ENSHCOG00000007481	tsen54	99	41.705	ENSHGLG00100005497	TSEN54	80	41.705	Heterocephalus_glaber_male
ENSHCOG00000007481	tsen54	99	48.219	ENSIPUG00000000590	tsen54	80	48.219	Ictalurus_punctatus
ENSHCOG00000007481	tsen54	99	41.839	ENSSTOG00000012883	TSEN54	80	41.379	Ictidomys_tridecemlineatus
ENSHCOG00000007481	tsen54	99	43.357	ENSJJAG00000007365	Tsen54	80	43.590	Jaculus_jaculus
ENSHCOG00000007481	tsen54	100	60.690	ENSKMAG00000006944	tsen54	81	60.460	Kryptolebias_marmoratus
ENSHCOG00000007481	tsen54	100	59.102	ENSLBEG00000004199	tsen54	81	58.865	Labrus_bergylta
ENSHCOG00000007481	tsen54	99	40.590	ENSLACG00000009497	TSEN54	83	40.590	Latimeria_chalumnae
ENSHCOG00000007481	tsen54	99	48.513	ENSLOCG00000011191	tsen54	81	47.936	Lepisosteus_oculatus
ENSHCOG00000007481	tsen54	99	40.984	ENSLAFG00000011655	TSEN54	80	41.784	Loxodonta_africana
ENSHCOG00000007481	tsen54	99	41.898	ENSMFAG00000000712	TSEN54	80	43.458	Macaca_fascicularis
ENSHCOG00000007481	tsen54	99	41.898	ENSMNEG00000029199	TSEN54	80	43.458	Macaca_nemestrina
ENSHCOG00000007481	tsen54	99	41.667	ENSMLEG00000044168	TSEN54	82	43.224	Mandrillus_leucophaeus
ENSHCOG00000007481	tsen54	100	65.301	ENSMAMG00000019773	tsen54	81	65.301	Mastacembelus_armatus
ENSHCOG00000007481	tsen54	100	63.679	ENSMZEG00005000884	tsen54	81	63.443	Maylandia_zebra
ENSHCOG00000007481	tsen54	99	42.202	ENSMGAG00000009556	TSEN54	81	42.694	Meleagris_gallopavo
ENSHCOG00000007481	tsen54	99	41.958	ENSMAUG00000016838	Tsen54	80	41.958	Mesocricetus_auratus
ENSHCOG00000007481	tsen54	99	42.482	ENSMICG00000044012	TSEN54	80	44.076	Microcebus_murinus
ENSHCOG00000007481	tsen54	99	42.130	ENSMOCG00000021585	Tsen54	80	41.452	Microtus_ochrogaster
ENSHCOG00000007481	tsen54	100	57.524	ENSMMOG00000020189	tsen54	82	58.981	Mola_mola
ENSHCOG00000007481	tsen54	99	41.629	ENSMODG00000007438	TSEN54	79	41.629	Monodelphis_domestica
ENSHCOG00000007481	tsen54	99	63.658	ENSMALG00000020573	tsen54	81	63.658	Monopterus_albus
ENSHCOG00000007481	tsen54	99	42.191	MGP_CAROLIEiJ_G0017417	Tsen54	80	42.191	Mus_caroli
ENSHCOG00000007481	tsen54	99	42.141	ENSMUSG00000020781	Tsen54	80	42.141	Mus_musculus
ENSHCOG00000007481	tsen54	99	41.844	MGP_PahariEiJ_G0018547	Tsen54	80	41.844	Mus_pahari
ENSHCOG00000007481	tsen54	99	42.553	MGP_SPRETEiJ_G0018262	Tsen54	80	42.553	Mus_spretus
ENSHCOG00000007481	tsen54	99	40.371	ENSMPUG00000013870	TSEN54	81	41.763	Mustela_putorius_furo
ENSHCOG00000007481	tsen54	99	42.131	ENSMLUG00000015298	TSEN54	81	43.269	Myotis_lucifugus
ENSHCOG00000007481	tsen54	99	42.689	ENSNGAG00000015673	Tsen54	80	42.689	Nannospalax_galili
ENSHCOG00000007481	tsen54	99	36.744	ENSMEUG00000011908	TSEN54	91	37.674	Notamacropus_eugenii
ENSHCOG00000007481	tsen54	99	37.530	ENSOPRG00000012513	TSEN54	80	37.530	Ochotona_princeps
ENSHCOG00000007481	tsen54	100	64.000	ENSONIG00000009543	tsen54	81	63.765	Oreochromis_niloticus
ENSHCOG00000007481	tsen54	56	43.478	ENSOCUG00000009875	TSEN54	78	39.545	Oryctolagus_cuniculus
ENSHCOG00000007481	tsen54	99	55.392	ENSORLG00000000852	tsen54	80	55.392	Oryzias_latipes
ENSHCOG00000007481	tsen54	99	56.127	ENSORLG00020018221	tsen54	90	56.127	Oryzias_latipes_hni
ENSHCOG00000007481	tsen54	99	55.882	ENSORLG00015009413	tsen54	69	71.028	Oryzias_latipes_hsok
ENSHCOG00000007481	tsen54	100	56.968	ENSOMEG00000014402	tsen54	78	56.968	Oryzias_melastigma
ENSHCOG00000007481	tsen54	99	40.421	ENSOGAG00000001442	TSEN54	80	40.421	Otolemur_garnettii
ENSHCOG00000007481	tsen54	99	40.091	ENSOARG00000010361	TSEN54	94	40.868	Ovis_aries
ENSHCOG00000007481	tsen54	99	42.389	ENSPPAG00000043519	TSEN54	85	43.632	Pan_paniscus
ENSHCOG00000007481	tsen54	99	41.379	ENSPPRG00000009162	TSEN54	81	43.590	Panthera_pardus
ENSHCOG00000007481	tsen54	99	41.014	ENSPTIG00000019312	TSEN54	90	42.290	Panthera_tigris_altaica
ENSHCOG00000007481	tsen54	99	42.130	ENSPTRG00000009646	TSEN54	80	43.692	Pan_troglodytes
ENSHCOG00000007481	tsen54	99	42.336	ENSPANG00000020133	TSEN54	80	43.224	Papio_anubis
ENSHCOG00000007481	tsen54	99	52.644	ENSPKIG00000023018	tsen54	99	52.404	Paramormyrops_kingsleyae
ENSHCOG00000007481	tsen54	99	43.508	ENSPSIG00000012807	TSEN54	100	43.508	Pelodiscus_sinensis
ENSHCOG00000007481	tsen54	100	44.660	ENSPMGG00000019578	tsen54	85	44.660	Periophthalmus_magnuspinnatus
ENSHCOG00000007481	tsen54	99	42.424	ENSPEMG00000014857	Tsen54	80	42.424	Peromyscus_maniculatus_bairdii
ENSHCOG00000007481	tsen54	100	65.291	ENSPFOG00000022740	tsen54	80	64.320	Poecilia_formosa
ENSHCOG00000007481	tsen54	100	66.667	ENSPLAG00000014847	tsen54	80	66.176	Poecilia_latipinna
ENSHCOG00000007481	tsen54	100	66.422	ENSPMEG00000022876	tsen54	80	65.931	Poecilia_mexicana
ENSHCOG00000007481	tsen54	100	65.931	ENSPREG00000013090	tsen54	80	65.441	Poecilia_reticulata
ENSHCOG00000007481	tsen54	80	58.491	ENSPPYG00000008629	TSEN54	87	43.171	Pongo_abelii
ENSHCOG00000007481	tsen54	59	64.286	ENSPCAG00000002093	TSEN54	55	64.286	Procavia_capensis
ENSHCOG00000007481	tsen54	99	40.000	ENSPCOG00000027880	TSEN54	81	41.570	Propithecus_coquereli
ENSHCOG00000007481	tsen54	99	41.309	ENSPVAG00000008446	TSEN54	81	42.045	Pteropus_vampyrus
ENSHCOG00000007481	tsen54	100	62.791	ENSPNYG00000010217	tsen54	100	61.165	Pundamilia_nyererei
ENSHCOG00000007481	tsen54	99	52.482	ENSPNAG00000003770	tsen54	81	52.482	Pygocentrus_nattereri
ENSHCOG00000007481	tsen54	99	42.553	ENSRNOG00000004598	Tsen54	80	42.553	Rattus_norvegicus
ENSHCOG00000007481	tsen54	99	42.558	ENSRBIG00000043040	TSEN54	80	42.991	Rhinopithecus_bieti
ENSHCOG00000007481	tsen54	99	42.558	ENSRROG00000030797	TSEN54	80	42.991	Rhinopithecus_roxellana
ENSHCOG00000007481	tsen54	99	38.369	ENSSBOG00000013543	TSEN54	79	39.810	Saimiri_boliviensis_boliviensis
ENSHCOG00000007481	tsen54	99	40.138	ENSSHAG00000018127	TSEN54	80	39.773	Sarcophilus_harrisii
ENSHCOG00000007481	tsen54	99	50.234	ENSSFOG00015004093	tsen54	99	50.831	Scleropages_formosus
ENSHCOG00000007481	tsen54	99	61.033	ENSSMAG00000012449	tsen54	97	61.737	Scophthalmus_maximus
ENSHCOG00000007481	tsen54	100	65.476	ENSSDUG00000021506	tsen54	81	65.476	Seriola_dumerili
ENSHCOG00000007481	tsen54	100	65.476	ENSSLDG00000016303	tsen54	81	65.476	Seriola_lalandi_dorsalis
ENSHCOG00000007481	tsen54	78	39.601	ENSSPUG00000008988	TSEN54	77	39.316	Sphenodon_punctatus
ENSHCOG00000007481	tsen54	100	66.829	ENSSPAG00000008098	-	100	63.570	Stegastes_partitus
ENSHCOG00000007481	tsen54	100	63.570	ENSSPAG00000008047	tsen54	100	63.570	Stegastes_partitus
ENSHCOG00000007481	tsen54	99	41.589	ENSSSCG00000036852	TSEN54	90	42.523	Sus_scrofa
ENSHCOG00000007481	tsen54	99	44.028	ENSTGUG00000008548	TSEN54	94	44.028	Taeniopygia_guttata
ENSHCOG00000007481	tsen54	100	59.559	ENSTRUG00000004230	tsen54	80	60.197	Takifugu_rubripes
ENSHCOG00000007481	tsen54	100	58.753	ENSTNIG00000011281	tsen54	82	58.993	Tetraodon_nigroviridis
ENSHCOG00000007481	tsen54	99	40.647	ENSTTRG00000015828	TSEN54	94	42.431	Tursiops_truncatus
ENSHCOG00000007481	tsen54	99	41.355	ENSUAMG00000010045	TSEN54	99	42.290	Ursus_americanus
ENSHCOG00000007481	tsen54	99	40.698	ENSUMAG00000008979	TSEN54	99	42.290	Ursus_maritimus
ENSHCOG00000007481	tsen54	99	41.514	ENSVVUG00000011411	TSEN54	82	42.890	Vulpes_vulpes
ENSHCOG00000007481	tsen54	100	40.714	ENSXETG00000012532	tsen54	63	68.571	Xenopus_tropicalis
ENSHCOG00000007481	tsen54	100	62.228	ENSXCOG00000018245	tsen54	100	61.259	Xiphophorus_couchianus
ENSHCOG00000007481	tsen54	100	65.441	ENSXMAG00000018818	tsen54	80	64.951	Xiphophorus_maculatus