EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007581 (Gene tree)
Gene ID: 109531767
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 35313 bases
Position: chrKV880447.1:235751-271063
Accession: 109531767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021045	GTP_EFTU	PF00009.27	1.4e-46	1	1
ENSHCOP00000005862	GTP_EFTU	PF00009.27	1.4e-46	1	1
ENSHCOP00000021045	MMR_HSR1	PF01926.23	5.4e-06	1	1
ENSHCOP00000005862	MMR_HSR1	PF01926.23	5.5e-06	1	1
ENSHCOP00000021045	GTP_EFTU_D3	PF03143.17	2.8e-26	1	1
ENSHCOP00000005862	GTP_EFTU_D3	PF03143.17	2.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004647	-	3363	XM_019896250	ENSHCOP00000005862	749 (aa)	XP_019751809	-
ENSHCOT00000004631	-	2922	XM_019896247	ENSHCOP00000021045	734 (aa)	XP_019751806	-

Gene Model

Click here to download ENSHCOG00000007581's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007581	hbs1l	58	39.636	ENSHCOG00000014718	eef1a1b	95	39.636
ENSHCOG00000007581	hbs1l	58	40.183	ENSHCOG00000008468	-	95	40.183
ENSHCOG00000007581	hbs1l	58	39.953	ENSHCOG00000015286	GSPT1	72	39.953
ENSHCOG00000007581	hbs1l	58	40.888	ENSHCOG00000016899	gspt1l	73	40.888
ENSHCOG00000007581	hbs1l	57	39.359	ENSHCOG00000008489	-	94	39.359
ENSHCOG00000007581	hbs1l	58	37.188	ENSHCOG00000001215	si:dkey-37o8.1	97	37.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007581	hbs1l	94	71.676	ENSG00000112339	HBS1L	100	89.362	Homo_sapiens
ENSHCOG00000007581	hbs1l	76	88.740	ENSAPOG00000013169	hbs1l	91	88.740	Acanthochromis_polyacanthus
ENSHCOG00000007581	hbs1l	94	70.647	ENSAMEG00000009749	HBS1L	99	71.225	Ailuropoda_melanoleuca
ENSHCOG00000007581	hbs1l	73	85.316	ENSACIG00000017087	hbs1l	91	85.316	Amphilophus_citrinellus
ENSHCOG00000007581	hbs1l	94	83.046	ENSAPEG00000008320	hbs1l	100	84.023	Amphiprion_percula
ENSHCOG00000007581	hbs1l	94	83.857	ENSATEG00000004459	hbs1l	100	84.681	Anabas_testudineus
ENSHCOG00000007581	hbs1l	93	70.376	ENSAPLG00000007791	HBS1L	100	69.653	Anas_platyrhynchos
ENSHCOG00000007581	hbs1l	94	70.749	ENSACAG00000010120	HBS1L	100	71.674	Anolis_carolinensis
ENSHCOG00000007581	hbs1l	94	71.140	ENSANAG00000038076	HBS1L	99	89.362	Aotus_nancymaae
ENSHCOG00000007581	hbs1l	94	81.688	ENSACLG00000010469	hbs1l	100	82.670	Astatotilapia_calliptera
ENSHCOG00000007581	hbs1l	93	76.062	ENSAMXG00000004260	hbs1l	97	83.333	Astyanax_mexicanus
ENSHCOG00000007581	hbs1l	94	70.996	ENSBTAG00000020174	HBS1L	100	71.612	Bos_taurus
ENSHCOG00000007581	hbs1l	58	47.917	WBGene00010622	K07A12.4	72	47.917	Caenorhabditis_elegans
ENSHCOG00000007581	hbs1l	93	72.119	ENSCJAG00000007678	HBS1L	99	89.362	Callithrix_jacchus
ENSHCOG00000007581	hbs1l	94	70.665	ENSCAFG00000000226	HBS1L	100	71.019	Canis_familiaris
ENSHCOG00000007581	hbs1l	94	70.665	ENSCAFG00020021904	HBS1L	100	71.019	Canis_lupus_dingo
ENSHCOG00000007581	hbs1l	94	70.707	ENSCHIG00000010299	HBS1L	100	71.060	Capra_hircus
ENSHCOG00000007581	hbs1l	94	69.099	ENSTSYG00000007089	HBS1L	96	85.106	Carlito_syrichta
ENSHCOG00000007581	hbs1l	93	62.158	ENSCPOG00000007015	HBS1L	99	62.158	Cavia_porcellus
ENSHCOG00000007581	hbs1l	93	71.095	ENSCCAG00000033863	HBS1L	98	88.235	Cebus_capucinus
ENSHCOG00000007581	hbs1l	94	71.965	ENSCATG00000043042	HBS1L	97	89.362	Cercocebus_atys
ENSHCOG00000007581	hbs1l	93	70.630	ENSCLAG00000004937	HBS1L	100	70.487	Chinchilla_lanigera
ENSHCOG00000007581	hbs1l	94	71.861	ENSCSAG00000016791	HBS1L	100	72.779	Chlorocebus_sabaeus
ENSHCOG00000007581	hbs1l	92	56.535	ENSCHOG00000001852	HBS1L	99	55.523	Choloepus_hoffmanni
ENSHCOG00000007581	hbs1l	94	70.707	ENSCPBG00000017635	HBS1L	100	71.633	Chrysemys_picta_bellii
ENSHCOG00000007581	hbs1l	93	47.808	ENSCING00000005592	-	99	47.808	Ciona_intestinalis
ENSHCOG00000007581	hbs1l	89	56.818	ENSCSAVG00000002297	-	99	57.037	Ciona_savignyi
ENSHCOG00000007581	hbs1l	94	71.532	ENSCANG00000031208	HBS1L	97	89.362	Colobus_angolensis_palliatus
ENSHCOG00000007581	hbs1l	94	71.223	ENSCGRG00001024531	Hbs1l	100	71.714	Cricetulus_griseus_chok1gshd
ENSHCOG00000007581	hbs1l	94	71.223	ENSCGRG00000017361	Hbs1l	100	71.714	Cricetulus_griseus_crigri
ENSHCOG00000007581	hbs1l	95	79.661	ENSCSEG00000002794	hbs1l	95	80.337	Cynoglossus_semilaevis
ENSHCOG00000007581	hbs1l	94	80.802	ENSCVAG00000001462	hbs1l	100	81.792	Cyprinodon_variegatus
ENSHCOG00000007581	hbs1l	93	75.931	ENSDARG00000036778	hbs1l	100	76.074	Danio_rerio
ENSHCOG00000007581	hbs1l	94	69.928	ENSDORG00000005958	Hbs1l	100	71.060	Dipodomys_ordii
ENSHCOG00000007581	hbs1l	93	46.369	FBgn0042712	HBS1	100	47.257	Drosophila_melanogaster
ENSHCOG00000007581	hbs1l	94	65.368	ENSETEG00000000913	HBS1L	100	65.473	Echinops_telfairi
ENSHCOG00000007581	hbs1l	93	57.328	ENSEBUG00000010759	hbs1l	100	62.890	Eptatretus_burgeri
ENSHCOG00000007581	hbs1l	94	70.959	ENSEASG00005011148	HBS1L	100	71.449	Equus_asinus_asinus
ENSHCOG00000007581	hbs1l	94	71.245	ENSECAG00000004470	HBS1L	100	71.591	Equus_caballus
ENSHCOG00000007581	hbs1l	93	67.096	ENSEEUG00000013582	HBS1L	100	67.190	Erinaceus_europaeus
ENSHCOG00000007581	hbs1l	76	72.951	ENSELUG00000006444	hbs1l	96	72.951	Esox_lucius
ENSHCOG00000007581	hbs1l	94	70.588	ENSFCAG00000001810	HBS1L	99	89.362	Felis_catus
ENSHCOG00000007581	hbs1l	83	72.712	ENSFALG00000011898	HBS1L	100	73.039	Ficedula_albicollis
ENSHCOG00000007581	hbs1l	94	70.563	ENSFDAG00000011841	HBS1L	100	71.203	Fukomys_damarensis
ENSHCOG00000007581	hbs1l	93	83.073	ENSFHEG00000006942	hbs1l	100	83.073	Fundulus_heteroclitus
ENSHCOG00000007581	hbs1l	93	76.538	ENSGMOG00000011843	hbs1l	100	76.714	Gadus_morhua
ENSHCOG00000007581	hbs1l	93	72.262	ENSGALG00000013962	HBS1L	100	71.266	Gallus_gallus
ENSHCOG00000007581	hbs1l	94	82.378	ENSGAFG00000004157	hbs1l	100	83.357	Gambusia_affinis
ENSHCOG00000007581	hbs1l	93	81.753	ENSGACG00000011035	hbs1l	100	82.159	Gasterosteus_aculeatus
ENSHCOG00000007581	hbs1l	94	69.784	ENSGAGG00000002033	HBS1L	100	70.085	Gopherus_agassizii
ENSHCOG00000007581	hbs1l	75	72.283	ENSGGOG00000034956	-	93	82.796	Gorilla_gorilla
ENSHCOG00000007581	hbs1l	94	81.831	ENSHBUG00000013424	hbs1l	100	82.812	Haplochromis_burtoni
ENSHCOG00000007581	hbs1l	94	70.418	ENSHGLG00000000516	HBS1L	100	71.060	Heterocephalus_glaber_female
ENSHCOG00000007581	hbs1l	94	70.418	ENSHGLG00100003550	HBS1L	100	71.060	Heterocephalus_glaber_male
ENSHCOG00000007581	hbs1l	93	74.462	ENSIPUG00000010748	hbs1l	100	73.458	Ictalurus_punctatus
ENSHCOG00000007581	hbs1l	94	71.614	ENSSTOG00000007551	HBS1L	100	72.063	Ictidomys_tridecemlineatus
ENSHCOG00000007581	hbs1l	95	54.636	ENSJJAG00000012660	-	100	55.731	Jaculus_jaculus
ENSHCOG00000007581	hbs1l	94	67.677	ENSJJAG00000017024	-	97	68.678	Jaculus_jaculus
ENSHCOG00000007581	hbs1l	94	81.571	ENSKMAG00000012130	hbs1l	100	82.553	Kryptolebias_marmoratus
ENSHCOG00000007581	hbs1l	84	92.683	ENSLBEG00000002784	hbs1l	100	92.683	Labrus_bergylta
ENSHCOG00000007581	hbs1l	66	76.829	ENSLACG00000004528	HBS1L	99	76.829	Latimeria_chalumnae
ENSHCOG00000007581	hbs1l	93	73.907	ENSLOCG00000016221	hbs1l	100	73.907	Lepisosteus_oculatus
ENSHCOG00000007581	hbs1l	94	68.293	ENSLAFG00000007835	HBS1L	100	68.956	Loxodonta_africana
ENSHCOG00000007581	hbs1l	94	71.965	ENSMFAG00000003766	HBS1L	100	89.362	Macaca_fascicularis
ENSHCOG00000007581	hbs1l	88	74.390	ENSMMUG00000004802	HBS1L	100	89.362	Macaca_mulatta
ENSHCOG00000007581	hbs1l	94	71.965	ENSMNEG00000043942	HBS1L	100	89.362	Macaca_nemestrina
ENSHCOG00000007581	hbs1l	94	71.698	ENSMLEG00000043218	HBS1L	97	89.362	Mandrillus_leucophaeus
ENSHCOG00000007581	hbs1l	93	83.097	ENSMAMG00000016498	hbs1l	98	85.421	Mastacembelus_armatus
ENSHCOG00000007581	hbs1l	94	81.688	ENSMZEG00005015575	hbs1l	100	82.670	Maylandia_zebra
ENSHCOG00000007581	hbs1l	73	85.714	ENSMZEG00005024018	-	90	85.714	Maylandia_zebra
ENSHCOG00000007581	hbs1l	93	71.843	ENSMGAG00000013065	HBS1L	99	70.201	Meleagris_gallopavo
ENSHCOG00000007581	hbs1l	94	70.588	ENSMAUG00000001077	Hbs1l	100	71.083	Mesocricetus_auratus
ENSHCOG00000007581	hbs1l	93	60.882	ENSMICG00000030043	-	96	79.570	Microcebus_murinus
ENSHCOG00000007581	hbs1l	94	66.570	ENSMICG00000001533	-	99	67.529	Microcebus_murinus
ENSHCOG00000007581	hbs1l	94	71.326	ENSMOCG00000023038	Hbs1l	100	71.817	Microtus_ochrogaster
ENSHCOG00000007581	hbs1l	92	83.260	ENSMMOG00000015507	hbs1l	100	83.260	Mola_mola
ENSHCOG00000007581	hbs1l	94	70.188	ENSMODG00000017499	HBS1L	100	71.060	Monodelphis_domestica
ENSHCOG00000007581	hbs1l	94	82.425	ENSMALG00000010768	hbs1l	100	83.381	Monopterus_albus
ENSHCOG00000007581	hbs1l	94	69.986	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.763	Mus_caroli
ENSHCOG00000007581	hbs1l	94	70.000	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSHCOG00000007581	hbs1l	94	70.228	MGP_PahariEiJ_G0023782	Hbs1l	100	71.146	Mus_pahari
ENSHCOG00000007581	hbs1l	94	69.844	MGP_SPRETEiJ_G0015970	Hbs1l	100	70.763	Mus_spretus
ENSHCOG00000007581	hbs1l	94	70.588	ENSMPUG00000014810	HBS1L	100	71.225	Mustela_putorius_furo
ENSHCOG00000007581	hbs1l	94	70.749	ENSMLUG00000010618	HBS1L	100	71.245	Myotis_lucifugus
ENSHCOG00000007581	hbs1l	93	71.449	ENSNGAG00000015184	Hbs1l	100	71.449	Nannospalax_galili
ENSHCOG00000007581	hbs1l	94	81.688	ENSNBRG00000020095	hbs1l	99	86.059	Neolamprologus_brichardi
ENSHCOG00000007581	hbs1l	94	70.954	ENSNLEG00000014721	HBS1L	99	89.362	Nomascus_leucogenys
ENSHCOG00000007581	hbs1l	76	79.695	ENSMEUG00000003907	HBS1L	81	79.695	Notamacropus_eugenii
ENSHCOG00000007581	hbs1l	71	79.339	ENSOPRG00000013595	HBS1L	71	80.851	Ochotona_princeps
ENSHCOG00000007581	hbs1l	93	71.179	ENSODEG00000008959	HBS1L	100	71.033	Octodon_degus
ENSHCOG00000007581	hbs1l	94	81.688	ENSONIG00000000460	hbs1l	100	82.062	Oreochromis_niloticus
ENSHCOG00000007581	hbs1l	94	70.563	ENSOANG00000002684	-	99	70.774	Ornithorhynchus_anatinus
ENSHCOG00000007581	hbs1l	93	68.946	ENSOCUG00000011619	HBS1L	99	70.484	Oryctolagus_cuniculus
ENSHCOG00000007581	hbs1l	93	80.085	ENSORLG00000016559	hbs1l	100	80.085	Oryzias_latipes
ENSHCOG00000007581	hbs1l	93	79.943	ENSORLG00020003827	hbs1l	100	79.943	Oryzias_latipes_hni
ENSHCOG00000007581	hbs1l	93	80.085	ENSORLG00015023105	hbs1l	100	80.085	Oryzias_latipes_hsok
ENSHCOG00000007581	hbs1l	93	80.797	ENSOMEG00000016715	hbs1l	100	80.797	Oryzias_melastigma
ENSHCOG00000007581	hbs1l	94	71.676	ENSOGAG00000012604	HBS1L	100	72.597	Otolemur_garnettii
ENSHCOG00000007581	hbs1l	94	70.707	ENSOARG00000005671	-	100	70.917	Ovis_aries
ENSHCOG00000007581	hbs1l	94	70.912	ENSOARG00000014798	-	99	71.264	Ovis_aries
ENSHCOG00000007581	hbs1l	94	71.532	ENSPPAG00000029900	HBS1L	97	89.362	Pan_paniscus
ENSHCOG00000007581	hbs1l	94	70.588	ENSPPRG00000005285	HBS1L	99	89.362	Panthera_pardus
ENSHCOG00000007581	hbs1l	94	70.588	ENSPTIG00000015803	HBS1L	99	89.362	Panthera_tigris_altaica
ENSHCOG00000007581	hbs1l	94	71.532	ENSPTRG00000018630	HBS1L	97	89.362	Pan_troglodytes
ENSHCOG00000007581	hbs1l	94	71.965	ENSPANG00000007075	HBS1L	97	89.362	Papio_anubis
ENSHCOG00000007581	hbs1l	93	74.499	ENSPKIG00000023171	hbs1l	97	78.759	Paramormyrops_kingsleyae
ENSHCOG00000007581	hbs1l	82	67.267	ENSPSIG00000016467	HBS1L	97	66.448	Pelodiscus_sinensis
ENSHCOG00000007581	hbs1l	93	78.152	ENSPMGG00000018051	hbs1l	96	86.702	Periophthalmus_magnuspinnatus
ENSHCOG00000007581	hbs1l	94	70.893	ENSPEMG00000014369	Hbs1l	100	71.388	Peromyscus_maniculatus_bairdii
ENSHCOG00000007581	hbs1l	94	63.256	ENSPMAG00000002516	hbs1l	100	63.662	Petromyzon_marinus
ENSHCOG00000007581	hbs1l	93	83.262	ENSPFOG00000021764	hbs1l	100	83.262	Poecilia_formosa
ENSHCOG00000007581	hbs1l	94	82.665	ENSPLAG00000006193	hbs1l	100	83.642	Poecilia_latipinna
ENSHCOG00000007581	hbs1l	94	82.665	ENSPMEG00000000925	hbs1l	100	83.642	Poecilia_mexicana
ENSHCOG00000007581	hbs1l	94	81.519	ENSPREG00000011270	hbs1l	100	82.504	Poecilia_reticulata
ENSHCOG00000007581	hbs1l	94	70.954	ENSPPYG00000017027	HBS1L	100	71.879	Pongo_abelii
ENSHCOG00000007581	hbs1l	83	75.970	ENSPCAG00000007002	HBS1L	79	75.970	Procavia_capensis
ENSHCOG00000007581	hbs1l	80	76.426	ENSPVAG00000015229	HBS1L	86	76.471	Pteropus_vampyrus
ENSHCOG00000007581	hbs1l	94	81.545	ENSPNYG00000013360	hbs1l	100	82.528	Pundamilia_nyererei
ENSHCOG00000007581	hbs1l	93	75.214	ENSPNAG00000026721	hbs1l	100	75.214	Pygocentrus_nattereri
ENSHCOG00000007581	hbs1l	94	69.714	ENSRNOG00000014531	Hbs1l	100	70.638	Rattus_norvegicus
ENSHCOG00000007581	hbs1l	94	71.965	ENSRBIG00000004484	HBS1L	97	89.362	Rhinopithecus_bieti
ENSHCOG00000007581	hbs1l	94	71.965	ENSRROG00000026176	HBS1L	97	87.234	Rhinopithecus_roxellana
ENSHCOG00000007581	hbs1l	58	38.427	YKR084C	-	73	38.427	Saccharomyces_cerevisiae
ENSHCOG00000007581	hbs1l	93	64.370	ENSSBOG00000016930	-	98	77.660	Saimiri_boliviensis_boliviensis
ENSHCOG00000007581	hbs1l	94	70.996	ENSSBOG00000019696	-	99	89.362	Saimiri_boliviensis_boliviensis
ENSHCOG00000007581	hbs1l	94	69.757	ENSSHAG00000013509	HBS1L	100	70.680	Sarcophilus_harrisii
ENSHCOG00000007581	hbs1l	93	75.827	ENSSFOG00015017544	hbs1l	96	75.827	Scleropages_formosus
ENSHCOG00000007581	hbs1l	93	81.534	ENSSMAG00000010621	hbs1l	100	81.960	Scophthalmus_maximus
ENSHCOG00000007581	hbs1l	94	83.262	ENSSDUG00000012974	hbs1l	100	84.233	Seriola_dumerili
ENSHCOG00000007581	hbs1l	94	83.548	ENSSLDG00000004960	hbs1l	99	92.771	Seriola_lalandi_dorsalis
ENSHCOG00000007581	hbs1l	93	70.614	ENSSARG00000006747	HBS1L	100	70.029	Sorex_araneus
ENSHCOG00000007581	hbs1l	93	70.301	ENSSPUG00000012389	HBS1L	99	70.158	Sphenodon_punctatus
ENSHCOG00000007581	hbs1l	91	70.703	ENSSSCG00000004169	HBS1L	100	70.570	Sus_scrofa
ENSHCOG00000007581	hbs1l	93	71.408	ENSTGUG00000011507	HBS1L	99	70.881	Taeniopygia_guttata
ENSHCOG00000007581	hbs1l	93	79.857	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSHCOG00000007581	hbs1l	93	81.151	ENSTNIG00000016320	hbs1l	99	81.151	Tetraodon_nigroviridis
ENSHCOG00000007581	hbs1l	94	64.162	ENSTBEG00000009950	HBS1L	100	65.136	Tupaia_belangeri
ENSHCOG00000007581	hbs1l	93	70.875	ENSTTRG00000003715	HBS1L	99	70.672	Tursiops_truncatus
ENSHCOG00000007581	hbs1l	94	71.019	ENSUAMG00000001064	HBS1L	100	71.591	Ursus_americanus
ENSHCOG00000007581	hbs1l	77	89.189	ENSUMAG00000024395	HBS1L	100	89.189	Ursus_maritimus
ENSHCOG00000007581	hbs1l	83	77.449	ENSVPAG00000006280	HBS1L	86	89.362	Vicugna_pacos
ENSHCOG00000007581	hbs1l	94	70.520	ENSVVUG00000000295	HBS1L	100	70.875	Vulpes_vulpes
ENSHCOG00000007581	hbs1l	93	69.496	ENSXETG00000003726	hbs1l	100	69.684	Xenopus_tropicalis
ENSHCOG00000007581	hbs1l	94	82.148	ENSXCOG00000005323	hbs1l	100	83.141	Xiphophorus_couchianus
ENSHCOG00000007581	hbs1l	94	82.808	ENSXMAG00000004359	hbs1l	100	83.784	Xiphophorus_maculatus