EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007604 (Gene tree)
Gene ID: 109515716
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109515716
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2841 bases
Position: chrKV879952.1:1399700-1402540
Accession: 109515716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021053	APOBEC_N	PF08210.11	5.1e-40	1	1
ENSHCOP00000021053	APOBEC_C	PF05240.14	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004605	-	2581	XM_019869679	ENSHCOP00000021053	360 (aa)	XP_019725238	UPI00094E3FCA

Gene Model

Click here to download ENSHCOG00000007604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007604	-	50	31.492	ENSHCOG00000002712	APOBEC2	68	31.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007604	-	51	30.808	ENSANAG00000031271	APOBEC3G	96	30.808	Aotus_nancymaae
ENSHCOG00000007604	-	51	31.122	ENSCCAG00000033147	-	90	31.122	Cebus_capucinus
ENSHCOG00000007604	-	51	32.020	ENSCCAG00000032232	-	94	32.020	Cebus_capucinus
ENSHCOG00000007604	-	50	38.043	ENSDNOG00000039749	-	83	38.043	Dasypus_novemcinctus
ENSHCOG00000007604	-	51	33.158	ENSLAFG00000020906	-	86	33.158	Loxodonta_africana
ENSHCOG00000007604	-	54	30.952	ENSMLEG00000024444	APOBEC3G	93	30.952	Mandrillus_leucophaeus
ENSHCOG00000007604	-	50	31.122	ENSSBOG00000023468	-	77	31.122	Saimiri_boliviensis_boliviensis
ENSHCOG00000007604	-	51	31.551	ENSSBOG00000025673	-	90	31.551	Saimiri_boliviensis_boliviensis
ENSHCOG00000007604	-	51	30.303	ENSSBOG00000026566	-	96	30.303	Saimiri_boliviensis_boliviensis