EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007691 (Gene tree)
Gene ID: 109516948
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10000 bases
Position: chrKV879983.1:242841-252840
Accession: 109516948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005921	Surp	PF01805.20	3.5e-17	1	1
ENSHCOP00000021064	Surp	PF01805.20	4.9e-17	1	1
ENSHCOP00000021074	Surp	PF01805.20	5.1e-17	1	1
ENSHCOP00000021064	G-patch	PF01585.23	1.4e-10	1	1
ENSHCOP00000021074	G-patch	PF01585.23	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004566	-	3557	XM_019871787	ENSHCOP00000021074	937 (aa)	XP_019727346	-
ENSHCOT00000004582	-	3512	XM_019871786	ENSHCOP00000021064	922 (aa)	XP_019727345	UPI00094E079E
ENSHCOT00000004543	-	3645	-	ENSHCOP00000005921	988 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000007691's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007691	cherp	79	64.453	ENSG00000085872	CHERP	80	66.223	Homo_sapiens
ENSHCOG00000007691	cherp	61	80.319	ENSAPOG00000009646	cherp	65	85.215	Acanthochromis_polyacanthus
ENSHCOG00000007691	cherp	78	65.107	ENSAMEG00000010048	CHERP	80	66.938	Ailuropoda_melanoleuca
ENSHCOG00000007691	cherp	100	68.050	ENSACIG00000019242	cherp	80	80.571	Amphilophus_citrinellus
ENSHCOG00000007691	cherp	99	79.592	ENSAOCG00000017846	cherp	79	80.716	Amphiprion_ocellaris
ENSHCOG00000007691	cherp	99	79.892	ENSAPEG00000021128	cherp	79	81.379	Amphiprion_percula
ENSHCOG00000007691	cherp	99	80.128	ENSATEG00000006341	cherp	79	81.806	Anabas_testudineus
ENSHCOG00000007691	cherp	76	63.401	ENSAPLG00000010773	CHERP	78	64.771	Anas_platyrhynchos
ENSHCOG00000007691	cherp	79	63.415	ENSANAG00000024284	CHERP	83	62.010	Aotus_nancymaae
ENSHCOG00000007691	cherp	100	79.487	ENSACLG00000020053	cherp	79	81.319	Astatotilapia_calliptera
ENSHCOG00000007691	cherp	100	69.719	ENSAMXG00000021637	cherp	75	71.771	Astyanax_mexicanus
ENSHCOG00000007691	cherp	99	62.959	ENSBTAG00000005289	CHERP	99	56.540	Bos_taurus
ENSHCOG00000007691	cherp	82	88.889	ENSCJAG00000040462	CHERP	96	82.609	Callithrix_jacchus
ENSHCOG00000007691	cherp	78	64.961	ENSCAFG00000015671	CHERP	80	66.489	Canis_familiaris
ENSHCOG00000007691	cherp	82	87.500	ENSCAFG00020009941	CHERP	94	87.654	Canis_lupus_dingo
ENSHCOG00000007691	cherp	91	82.105	ENSCHIG00000013765	CHERP	95	82.609	Capra_hircus
ENSHCOG00000007691	cherp	87	59.532	ENSCAPG00000000910	CHERP	74	59.624	Cavia_aperea
ENSHCOG00000007691	cherp	78	63.589	ENSCPOG00000019949	CHERP	79	64.954	Cavia_porcellus
ENSHCOG00000007691	cherp	79	63.415	ENSCCAG00000031534	CHERP	80	65.007	Cebus_capucinus
ENSHCOG00000007691	cherp	79	63.625	ENSCATG00000031409	CHERP	80	64.744	Cercocebus_atys
ENSHCOG00000007691	cherp	66	64.329	ENSCLAG00000005484	CHERP	73	65.046	Chinchilla_lanigera
ENSHCOG00000007691	cherp	79	64.921	ENSCSAG00000005740	CHERP	80	66.356	Chlorocebus_sabaeus
ENSHCOG00000007691	cherp	79	64.947	ENSCPBG00000014970	CHERP	80	66.712	Chrysemys_picta_bellii
ENSHCOG00000007691	cherp	74	48.688	ENSCING00000004814	-	54	73.737	Ciona_intestinalis
ENSHCOG00000007691	cherp	54	76.667	ENSCSAVG00000002455	-	65	57.692	Ciona_savignyi
ENSHCOG00000007691	cherp	79	64.921	ENSCANG00000032053	CHERP	80	66.223	Colobus_angolensis_palliatus
ENSHCOG00000007691	cherp	79	62.949	ENSCGRG00001023316	Cherp	80	64.407	Cricetulus_griseus_chok1gshd
ENSHCOG00000007691	cherp	79	63.802	ENSCGRG00000015901	Cherp	80	65.430	Cricetulus_griseus_crigri
ENSHCOG00000007691	cherp	79	80.567	ENSCSEG00000019700	cherp	78	81.276	Cynoglossus_semilaevis
ENSHCOG00000007691	cherp	75	76.705	ENSCVAG00000003622	cherp	93	76.411	Cyprinodon_variegatus
ENSHCOG00000007691	cherp	99	69.247	ENSDARG00000021812	cherp	100	73.764	Danio_rerio
ENSHCOG00000007691	cherp	98	61.700	ENSDORG00000027623	Cherp	99	52.832	Dipodomys_ordii
ENSHCOG00000007691	cherp	68	56.000	FBgn0261872	scaf6	52	61.017	Drosophila_melanogaster
ENSHCOG00000007691	cherp	53	70.667	ENSETEG00000019543	CHERP	63	70.667	Echinops_telfairi
ENSHCOG00000007691	cherp	66	67.692	ENSEBUG00000009109	cherp	55	68.889	Eptatretus_burgeri
ENSHCOG00000007691	cherp	78	64.961	ENSEASG00005000428	CHERP	73	66.755	Equus_asinus_asinus
ENSHCOG00000007691	cherp	78	64.961	ENSECAG00000012713	CHERP	80	66.755	Equus_caballus
ENSHCOG00000007691	cherp	99	69.710	ENSELUG00000023026	cherp	80	73.187	Esox_lucius
ENSHCOG00000007691	cherp	78	63.742	ENSFCAG00000013172	CHERP	80	65.098	Felis_catus
ENSHCOG00000007691	cherp	79	64.342	ENSFALG00000013410	CHERP	69	66.040	Ficedula_albicollis
ENSHCOG00000007691	cherp	78	59.538	ENSFDAG00000015981	CHERP	81	60.852	Fukomys_damarensis
ENSHCOG00000007691	cherp	84	69.328	ENSFHEG00000009720	cherp	79	92.982	Fundulus_heteroclitus
ENSHCOG00000007691	cherp	98	74.317	ENSGMOG00000008654	cherp	79	75.310	Gadus_morhua
ENSHCOG00000007691	cherp	79	64.597	ENSGALG00000003824	CHERP	70	66.622	Gallus_gallus
ENSHCOG00000007691	cherp	99	78.739	ENSGACG00000002053	cherp	78	77.442	Gasterosteus_aculeatus
ENSHCOG00000007691	cherp	78	64.721	ENSGAGG00000014208	CHERP	80	66.577	Gopherus_agassizii
ENSHCOG00000007691	cherp	100	79.380	ENSHBUG00000007405	cherp	79	81.731	Haplochromis_burtoni
ENSHCOG00000007691	cherp	79	64.961	ENSHGLG00000002993	CHERP	79	66.756	Heterocephalus_glaber_female
ENSHCOG00000007691	cherp	51	67.442	ENSHGLG00100010390	CHERP	65	67.536	Heterocephalus_glaber_male
ENSHCOG00000007691	cherp	100	69.915	ENSIPUG00000025008	cherp	79	73.569	Ictalurus_punctatus
ENSHCOG00000007691	cherp	98	63.152	ENSSTOG00000012089	CHERP	80	66.622	Ictidomys_tridecemlineatus
ENSHCOG00000007691	cherp	79	77.989	ENSKMAG00000009101	cherp	79	79.862	Kryptolebias_marmoratus
ENSHCOG00000007691	cherp	78	77.747	ENSLBEG00000007586	cherp	91	79.109	Labrus_bergylta
ENSHCOG00000007691	cherp	79	64.789	ENSLACG00000018221	CHERP	80	65.370	Latimeria_chalumnae
ENSHCOG00000007691	cherp	100	69.639	ENSLOCG00000003654	cherp	79	71.716	Lepisosteus_oculatus
ENSHCOG00000007691	cherp	78	65.303	ENSLAFG00000009096	CHERP	80	66.399	Loxodonta_africana
ENSHCOG00000007691	cherp	79	63.871	ENSMFAG00000033267	CHERP	80	65.138	Macaca_fascicularis
ENSHCOG00000007691	cherp	99	61.123	ENSMMUG00000012958	CHERP	82	65.000	Macaca_mulatta
ENSHCOG00000007691	cherp	79	63.871	ENSMNEG00000004125	CHERP	80	65.138	Macaca_nemestrina
ENSHCOG00000007691	cherp	72	80.921	ENSMLEG00000044337	CHERP	76	81.333	Mandrillus_leucophaeus
ENSHCOG00000007691	cherp	100	79.699	ENSMAMG00000022269	cherp	78	82.940	Mastacembelus_armatus
ENSHCOG00000007691	cherp	100	79.487	ENSMZEG00005018014	cherp	79	81.181	Maylandia_zebra
ENSHCOG00000007691	cherp	66	67.190	ENSMGAG00000005571	CHERP	71	66.930	Meleagris_gallopavo
ENSHCOG00000007691	cherp	99	55.691	ENSMAUG00000015856	Cherp	82	64.783	Mesocricetus_auratus
ENSHCOG00000007691	cherp	78	64.267	ENSMICG00000004577	CHERP	80	66.446	Microcebus_murinus
ENSHCOG00000007691	cherp	79	64.249	ENSMOCG00000014697	Cherp	79	65.604	Microtus_ochrogaster
ENSHCOG00000007691	cherp	83	95.833	ENSMMOG00000008525	cherp	89	90.789	Mola_mola
ENSHCOG00000007691	cherp	100	78.701	ENSMALG00000020688	cherp	79	81.461	Monopterus_albus
ENSHCOG00000007691	cherp	79	63.789	MGP_CAROLIEiJ_G0031220	Cherp	79	65.132	Mus_caroli
ENSHCOG00000007691	cherp	79	63.707	ENSMUSG00000052488	Cherp	79	65.046	Mus_musculus
ENSHCOG00000007691	cherp	79	64.156	MGP_PahariEiJ_G0021685	Cherp	79	65.870	Mus_pahari
ENSHCOG00000007691	cherp	79	63.953	MGP_SPRETEiJ_G0032341	Cherp	79	65.303	Mus_spretus
ENSHCOG00000007691	cherp	78	64.837	ENSMPUG00000016023	CHERP	77	66.268	Mustela_putorius_furo
ENSHCOG00000007691	cherp	79	60.495	ENSMLUG00000013881	CHERP	80	61.589	Myotis_lucifugus
ENSHCOG00000007691	cherp	100	75.294	ENSNBRG00000001914	cherp	81	80.136	Neolamprologus_brichardi
ENSHCOG00000007691	cherp	79	64.660	ENSNLEG00000005536	CHERP	80	66.090	Nomascus_leucogenys
ENSHCOG00000007691	cherp	66	72.277	ENSMEUG00000010840	CHERP	71	73.720	Notamacropus_eugenii
ENSHCOG00000007691	cherp	78	65.073	ENSODEG00000001528	CHERP	81	66.214	Octodon_degus
ENSHCOG00000007691	cherp	100	79.060	ENSONIG00000007686	cherp	79	81.250	Oreochromis_niloticus
ENSHCOG00000007691	cherp	100	79.421	ENSORLG00000000138	cherp	79	80.807	Oryzias_latipes
ENSHCOG00000007691	cherp	100	79.207	ENSORLG00020013142	cherp	86	77.286	Oryzias_latipes_hni
ENSHCOG00000007691	cherp	100	79.314	ENSORLG00015008911	cherp	79	80.668	Oryzias_latipes_hsok
ENSHCOG00000007691	cherp	100	79.636	ENSOMEG00000016947	cherp	82	79.235	Oryzias_melastigma
ENSHCOG00000007691	cherp	79	63.874	ENSOGAG00000005834	CHERP	79	65.426	Otolemur_garnettii
ENSHCOG00000007691	cherp	78	57.860	ENSOARG00000018876	CHERP	78	58.768	Ovis_aries
ENSHCOG00000007691	cherp	79	63.171	ENSPPAG00000029195	CHERP	80	64.613	Pan_paniscus
ENSHCOG00000007691	cherp	78	63.742	ENSPPRG00000003275	CHERP	80	65.098	Panthera_pardus
ENSHCOG00000007691	cherp	84	82.222	ENSPTIG00000019778	CHERP	96	82.222	Panthera_tigris_altaica
ENSHCOG00000007691	cherp	79	64.202	ENSPTRG00000010647	CHERP	80	65.824	Pan_troglodytes
ENSHCOG00000007691	cherp	79	63.871	ENSPANG00000011698	CHERP	80	65.138	Papio_anubis
ENSHCOG00000007691	cherp	75	65.021	ENSPKIG00000000423	cherp	80	67.715	Paramormyrops_kingsleyae
ENSHCOG00000007691	cherp	78	64.729	ENSPSIG00000011974	CHERP	80	65.997	Pelodiscus_sinensis
ENSHCOG00000007691	cherp	98	69.674	ENSPMGG00000023606	cherp	91	97.468	Periophthalmus_magnuspinnatus
ENSHCOG00000007691	cherp	79	62.897	ENSPEMG00000011238	Cherp	80	64.073	Peromyscus_maniculatus_bairdii
ENSHCOG00000007691	cherp	78	63.777	ENSPCIG00000019615	CHERP	77	64.491	Phascolarctos_cinereus
ENSHCOG00000007691	cherp	100	75.161	ENSPFOG00000016899	cherp	79	78.867	Poecilia_formosa
ENSHCOG00000007691	cherp	83	75.547	ENSPMEG00000002214	cherp	76	80.069	Poecilia_mexicana
ENSHCOG00000007691	cherp	99	76.623	ENSPREG00000020774	cherp	79	79.558	Poecilia_reticulata
ENSHCOG00000007691	cherp	79	63.061	ENSPPYG00000009691	CHERP	79	64.382	Pongo_abelii
ENSHCOG00000007691	cherp	88	80.851	ENSPCAG00000001337	CHERP	90	80.435	Procavia_capensis
ENSHCOG00000007691	cherp	86	81.915	ENSPVAG00000004320	CHERP	90	81.522	Pteropus_vampyrus
ENSHCOG00000007691	cherp	100	79.701	ENSPNYG00000003942	cherp	79	81.319	Pundamilia_nyererei
ENSHCOG00000007691	cherp	100	69.112	ENSPNAG00000017179	cherp	80	71.164	Pygocentrus_nattereri
ENSHCOG00000007691	cherp	79	63.789	ENSRNOG00000012323	Cherp	79	65.132	Rattus_norvegicus
ENSHCOG00000007691	cherp	79	64.921	ENSRBIG00000038621	CHERP	84	65.000	Rhinopithecus_bieti
ENSHCOG00000007691	cherp	79	63.871	ENSRROG00000040770	CHERP	84	65.000	Rhinopithecus_roxellana
ENSHCOG00000007691	cherp	99	56.142	ENSSBOG00000014492	CHERP	99	54.452	Saimiri_boliviensis_boliviensis
ENSHCOG00000007691	cherp	88	81.707	ENSSFOG00015008022	cherp	81	81.707	Scleropages_formosus
ENSHCOG00000007691	cherp	100	77.094	ENSSMAG00000005362	cherp	79	80.350	Scophthalmus_maximus
ENSHCOG00000007691	cherp	100	78.220	ENSSDUG00000019712	cherp	79	81.145	Seriola_dumerili
ENSHCOG00000007691	cherp	100	78.881	ENSSLDG00000012659	cherp	79	80.518	Seriola_lalandi_dorsalis
ENSHCOG00000007691	cherp	78	66.893	ENSSPUG00000008901	CHERP	79	66.713	Sphenodon_punctatus
ENSHCOG00000007691	cherp	100	79.616	ENSSPAG00000010681	cherp	79	81.207	Stegastes_partitus
ENSHCOG00000007691	cherp	78	65.223	ENSSSCG00000013860	CHERP	80	66.888	Sus_scrofa
ENSHCOG00000007691	cherp	79	64.258	ENSTGUG00000000680	CHERP	80	65.550	Taeniopygia_guttata
ENSHCOG00000007691	cherp	99	74.015	ENSTRUG00000007429	cherp	88	78.322	Takifugu_rubripes
ENSHCOG00000007691	cherp	99	72.885	ENSTNIG00000003363	cherp	79	78.363	Tetraodon_nigroviridis
ENSHCOG00000007691	cherp	66	66.667	ENSTTRG00000015006	CHERP	70	66.667	Tursiops_truncatus
ENSHCOG00000007691	cherp	99	61.029	ENSUAMG00000017295	CHERP	86	61.735	Ursus_americanus
ENSHCOG00000007691	cherp	76	78.351	ENSUMAG00000000965	CHERP	74	80.645	Ursus_maritimus
ENSHCOG00000007691	cherp	83	81.053	ENSVVUG00000016546	CHERP	90	81.522	Vulpes_vulpes
ENSHCOG00000007691	cherp	99	62.292	ENSXETG00000002072	cherp	78	64.447	Xenopus_tropicalis