EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007715 (Gene tree)
Gene ID: 109519577
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3791 bases
Position: chrKV880073.1:137716-141506
Accession: 109519577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000005990	RRM_1	PF00076.22	1.5e-21	1	2
ENSHCOP00000005990	RRM_1	PF00076.22	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004421	-	1395	XM_019876207	ENSHCOP00000005990	387 (aa)	XP_019731766	UPI00094E48F7

Gene Model

Click here to download ENSHCOG00000007715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007715	-	52	30.415	ENSHCOG00000014952	rbm12b	56	30.415
ENSHCOG00000007715	-	78	55.263	ENSHCOG00000014335	hnrnph3	68	55.263
ENSHCOG00000007715	-	76	39.941	ENSHCOG00000004513	hnrnph1	81	40.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007715	-	99	55.779	ENSAPOG00000012487	grsf1	99	55.779	Acanthochromis_polyacanthus
ENSHCOG00000007715	-	99	57.250	ENSACIG00000005871	grsf1	99	57.250	Amphilophus_citrinellus
ENSHCOG00000007715	-	99	55.890	ENSAOCG00000017462	-	99	55.890	Amphiprion_ocellaris
ENSHCOG00000007715	-	99	55.639	ENSAPEG00000007240	-	99	55.639	Amphiprion_percula
ENSHCOG00000007715	-	99	58.105	ENSATEG00000007185	grsf1	99	58.105	Anabas_testudineus
ENSHCOG00000007715	-	99	58.809	ENSACLG00000003685	-	99	58.809	Astatotilapia_calliptera
ENSHCOG00000007715	-	85	45.110	ENSAMXG00000012270	grsf1	99	45.110	Astyanax_mexicanus
ENSHCOG00000007715	-	99	56.748	ENSCSEG00000019209	-	99	56.748	Cynoglossus_semilaevis
ENSHCOG00000007715	-	99	56.203	ENSCVAG00000004476	grsf1	99	56.203	Cyprinodon_variegatus
ENSHCOG00000007715	-	95	44.800	ENSDARG00000053021	grsf1	89	44.800	Danio_rerio
ENSHCOG00000007715	-	99	43.035	ENSFHEG00000013358	-	99	43.781	Fundulus_heteroclitus
ENSHCOG00000007715	-	78	49.169	ENSGMOG00000014047	grsf1	100	49.169	Gadus_morhua
ENSHCOG00000007715	-	99	55.446	ENSGAFG00000004496	grsf1	99	55.446	Gambusia_affinis
ENSHCOG00000007715	-	78	55.521	ENSGACG00000014447	grsf1	98	55.521	Gasterosteus_aculeatus
ENSHCOG00000007715	-	99	58.561	ENSHBUG00000006284	grsf1	99	58.561	Haplochromis_burtoni
ENSHCOG00000007715	-	84	49.697	ENSIPUG00000010533	grsf1	83	49.697	Ictalurus_punctatus
ENSHCOG00000007715	-	99	50.000	ENSKMAG00000004528	grsf1	99	51.196	Kryptolebias_marmoratus
ENSHCOG00000007715	-	79	48.734	ENSLBEG00000018100	grsf1	98	48.734	Labrus_bergylta
ENSHCOG00000007715	-	99	55.446	ENSMAMG00000002627	grsf1	99	55.446	Mastacembelus_armatus
ENSHCOG00000007715	-	99	59.305	ENSMZEG00005020633	-	99	59.305	Maylandia_zebra
ENSHCOG00000007715	-	90	60.997	ENSMMOG00000014231	grsf1	98	57.254	Mola_mola
ENSHCOG00000007715	-	98	54.634	ENSMALG00000000251	grsf1	99	54.634	Monopterus_albus
ENSHCOG00000007715	-	98	57.500	ENSNBRG00000017774	grsf1	96	57.500	Neolamprologus_brichardi
ENSHCOG00000007715	-	99	60.750	ENSONIG00000014119	grsf1	99	60.750	Oreochromis_niloticus
ENSHCOG00000007715	-	84	59.517	ENSORLG00000030211	grsf1	84	59.517	Oryzias_latipes
ENSHCOG00000007715	-	82	60.681	ENSORLG00020014383	grsf1	82	60.681	Oryzias_latipes_hni
ENSHCOG00000007715	-	84	58.716	ENSORLG00015006520	grsf1	85	59.104	Oryzias_latipes_hsok
ENSHCOG00000007715	-	83	59.375	ENSOMEG00000009181	grsf1	84	61.111	Oryzias_melastigma
ENSHCOG00000007715	-	81	53.560	ENSPKIG00000019432	grsf1	77	53.560	Paramormyrops_kingsleyae
ENSHCOG00000007715	-	85	57.895	ENSPMGG00000013654	grsf1	93	57.895	Periophthalmus_magnuspinnatus
ENSHCOG00000007715	-	99	55.802	ENSPFOG00000006122	grsf1	99	55.448	Poecilia_formosa
ENSHCOG00000007715	-	99	56.328	ENSPLAG00000020977	grsf1	99	55.746	Poecilia_latipinna
ENSHCOG00000007715	-	99	55.556	ENSPMEG00000012485	grsf1	99	55.448	Poecilia_mexicana
ENSHCOG00000007715	-	99	55.693	ENSPREG00000013383	grsf1	99	55.610	Poecilia_reticulata
ENSHCOG00000007715	-	99	58.794	ENSPNYG00000005379	grsf1	99	58.794	Pundamilia_nyererei
ENSHCOG00000007715	-	88	51.163	ENSPNAG00000014912	grsf1	84	51.163	Pygocentrus_nattereri
ENSHCOG00000007715	-	84	43.161	ENSSFOG00015014620	grsf1	84	43.161	Scleropages_formosus
ENSHCOG00000007715	-	82	57.862	ENSSMAG00000014181	grsf1	70	57.862	Scophthalmus_maximus
ENSHCOG00000007715	-	100	56.122	ENSSDUG00000009397	-	96	62.013	Seriola_dumerili
ENSHCOG00000007715	-	100	54.975	ENSSLDG00000025494	grsf1	98	56.780	Seriola_lalandi_dorsalis
ENSHCOG00000007715	-	99	57.431	ENSSPAG00000023296	grsf1	99	57.431	Stegastes_partitus
ENSHCOG00000007715	-	91	56.461	ENSTRUG00000015354	grsf1	99	53.535	Takifugu_rubripes
ENSHCOG00000007715	-	84	55.591	ENSTNIG00000015350	-	100	55.449	Tetraodon_nigroviridis
ENSHCOG00000007715	-	99	55.224	ENSXMAG00000029710	grsf1	99	55.224	Xiphophorus_maculatus