EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000007732 (Gene tree)
Gene ID: 109526409
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4656 bases
Position: chrKV880257.1:208153-212808
Accession: 109526409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006001	MMR_HSR1	PF01926.23	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004407	-	3358	XM_019887695	ENSHCOP00000006001	267 (aa)	XP_019743254	UPI00094E351A

Gene Model

Click here to download ENSHCOG00000007732's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000007732	srprb	52	32.374	ENSHCOG00000015779	arl8	76	32.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007732	srprb	99	82.288	ENSAPOG00000021219	srprb	98	82.288	Acanthochromis_polyacanthus
ENSHCOG00000007732	srprb	99	83.083	ENSACIG00000014621	srprb	100	83.083	Amphilophus_citrinellus
ENSHCOG00000007732	srprb	99	81.550	ENSAOCG00000017265	srprb	98	81.550	Amphiprion_ocellaris
ENSHCOG00000007732	srprb	99	81.550	ENSAPEG00000024541	srprb	87	81.550	Amphiprion_percula
ENSHCOG00000007732	srprb	99	81.413	ENSATEG00000014016	srprb	98	81.413	Anabas_testudineus
ENSHCOG00000007732	srprb	99	81.852	ENSACLG00000016748	srprb	98	81.852	Astatotilapia_calliptera
ENSHCOG00000007732	srprb	96	72.157	ENSAMXG00000044118	srprb	95	72.441	Astyanax_mexicanus
ENSHCOG00000007732	srprb	99	77.695	ENSCSEG00000017194	srprb	98	77.695	Cynoglossus_semilaevis
ENSHCOG00000007732	srprb	99	83.459	ENSCVAG00000004221	srprb	100	83.459	Cyprinodon_variegatus
ENSHCOG00000007732	srprb	99	69.173	ENSDARG00000030949	srprb	100	69.173	Danio_rerio
ENSHCOG00000007732	srprb	99	77.736	ENSELUG00000009740	srprb	98	77.736	Esox_lucius
ENSHCOG00000007732	srprb	99	83.459	ENSFHEG00000006004	srprb	100	83.459	Fundulus_heteroclitus
ENSHCOG00000007732	srprb	99	77.985	ENSGMOG00000002081	srprb	99	77.985	Gadus_morhua
ENSHCOG00000007732	srprb	98	81.818	ENSGAFG00000012593	srprb	99	81.818	Gambusia_affinis
ENSHCOG00000007732	srprb	99	83.271	ENSGACG00000009891	srprb	99	83.271	Gasterosteus_aculeatus
ENSHCOG00000007732	srprb	99	81.852	ENSHBUG00000002145	srprb	98	81.852	Haplochromis_burtoni
ENSHCOG00000007732	srprb	99	67.045	ENSIPUG00000004177	srprb	98	67.045	Ictalurus_punctatus
ENSHCOG00000007732	srprb	98	81.679	ENSKMAG00000020736	srprb	98	81.679	Kryptolebias_marmoratus
ENSHCOG00000007732	srprb	99	82.463	ENSLBEG00000021483	srprb	97	82.463	Labrus_bergylta
ENSHCOG00000007732	srprb	99	68.889	ENSLOCG00000009740	srprb	90	68.148	Lepisosteus_oculatus
ENSHCOG00000007732	srprb	95	86.561	ENSMAMG00000011876	srprb	92	86.561	Mastacembelus_armatus
ENSHCOG00000007732	srprb	96	83.333	ENSMZEG00005016621	srprb	99	83.333	Maylandia_zebra
ENSHCOG00000007732	srprb	99	82.890	ENSMMOG00000012550	srprb	95	82.890	Mola_mola
ENSHCOG00000007732	srprb	99	81.579	ENSMALG00000012595	srprb	98	81.579	Monopterus_albus
ENSHCOG00000007732	srprb	74	82.000	ENSNBRG00000004699	srprb	85	82.000	Neolamprologus_brichardi
ENSHCOG00000007732	srprb	99	81.784	ENSONIG00000003788	srprb	80	81.784	Oreochromis_niloticus
ENSHCOG00000007732	srprb	100	78.519	ENSORLG00000006430	srprb	99	78.519	Oryzias_latipes
ENSHCOG00000007732	srprb	100	78.889	ENSORLG00020003413	srprb	98	78.889	Oryzias_latipes_hni
ENSHCOG00000007732	srprb	100	78.889	ENSORLG00015000166	srprb	98	78.889	Oryzias_latipes_hsok
ENSHCOG00000007732	srprb	100	79.630	ENSOMEG00000012735	srprb	98	79.630	Oryzias_melastigma
ENSHCOG00000007732	srprb	94	72.908	ENSPKIG00000013147	srprb	95	72.112	Paramormyrops_kingsleyae
ENSHCOG00000007732	srprb	100	80.150	ENSPMGG00000014061	srprb	97	80.150	Periophthalmus_magnuspinnatus
ENSHCOG00000007732	srprb	98	82.197	ENSPFOG00000011347	srprb	96	82.197	Poecilia_formosa
ENSHCOG00000007732	srprb	99	82.890	ENSPLAG00000001156	srprb	100	82.890	Poecilia_latipinna
ENSHCOG00000007732	srprb	94	84.524	ENSPMEG00000012169	srprb	98	84.524	Poecilia_mexicana
ENSHCOG00000007732	srprb	95	83.399	ENSPREG00000001449	srprb	98	83.399	Poecilia_reticulata
ENSHCOG00000007732	srprb	99	81.852	ENSPNYG00000005911	srprb	98	81.852	Pundamilia_nyererei
ENSHCOG00000007732	srprb	99	72.932	ENSPNAG00000009983	srprb	100	72.932	Pygocentrus_nattereri
ENSHCOG00000007732	srprb	96	73.047	ENSSFOG00015019355	srprb	96	71.875	Scleropages_formosus
ENSHCOG00000007732	srprb	95	84.980	ENSSMAG00000013202	srprb	92	84.980	Scophthalmus_maximus
ENSHCOG00000007732	srprb	99	82.528	ENSSDUG00000018746	srprb	92	82.528	Seriola_dumerili
ENSHCOG00000007732	srprb	99	82.156	ENSSLDG00000020560	srprb	98	82.156	Seriola_lalandi_dorsalis
ENSHCOG00000007732	srprb	99	82.657	ENSSPAG00000008898	srprb	98	82.657	Stegastes_partitus
ENSHCOG00000007732	srprb	99	81.784	ENSTRUG00000022463	srprb	98	81.784	Takifugu_rubripes
ENSHCOG00000007732	srprb	98	77.099	ENSTNIG00000007725	srprb	98	77.099	Tetraodon_nigroviridis
ENSHCOG00000007732	srprb	99	82.890	ENSXCOG00000012585	srprb	100	82.890	Xiphophorus_couchianus
ENSHCOG00000007732	srprb	99	82.510	ENSXMAG00000028725	srprb	100	82.510	Xiphophorus_maculatus