EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007848 (Gene tree)
Gene ID: 109526922
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 15594 bases
Position: chrKV879773.1:280395-295988
Accession: 109526922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006116	ResIII	PF04851.15	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004217	-	4504	XM_019888504	ENSHCOP00000006116	1087 (aa)	XP_019744063	UPI00094EA2AA

Gene Model

Click here to download ENSHCOG00000007848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007848	smarcad1a	98	59.306	ENSG00000163104	SMARCAD1	100	64.597	Homo_sapiens
ENSHCOG00000007848	smarcad1a	100	62.278	ENSAPOG00000011446	smarcad1a	100	63.387	Acanthochromis_polyacanthus
ENSHCOG00000007848	smarcad1a	64	60.508	ENSAMEG00000005844	SMARCAD1	63	63.919	Ailuropoda_melanoleuca
ENSHCOG00000007848	smarcad1a	64	78.261	ENSACIG00000018326	smarcad1a	93	77.861	Amphilophus_citrinellus
ENSHCOG00000007848	smarcad1a	100	62.433	ENSAOCG00000019762	smarcad1a	100	63.330	Amphiprion_ocellaris
ENSHCOG00000007848	smarcad1a	100	62.345	ENSAPEG00000003889	smarcad1a	100	63.330	Amphiprion_percula
ENSHCOG00000007848	smarcad1a	84	69.099	ENSATEG00000015608	smarcad1a	98	64.212	Anabas_testudineus
ENSHCOG00000007848	smarcad1a	84	65.373	ENSAPLG00000004630	SMARCAD1	82	65.373	Anas_platyrhynchos
ENSHCOG00000007848	smarcad1a	61	62.369	ENSACAG00000013554	SMARCAD1	63	63.665	Anolis_carolinensis
ENSHCOG00000007848	smarcad1a	94	62.126	ENSANAG00000020488	SMARCAD1	99	63.411	Aotus_nancymaae
ENSHCOG00000007848	smarcad1a	100	61.374	ENSACLG00000017063	smarcad1a	100	62.011	Astatotilapia_calliptera
ENSHCOG00000007848	smarcad1a	61	68.311	ENSAMXG00000015470	smarcad1a	89	70.644	Astyanax_mexicanus
ENSHCOG00000007848	smarcad1a	75	63.833	ENSAMXG00000019130	smarcad1b	77	70.487	Astyanax_mexicanus
ENSHCOG00000007848	smarcad1a	97	60.056	ENSBTAG00000017061	SMARCAD1	99	63.411	Bos_taurus
ENSHCOG00000007848	smarcad1a	60	39.637	WBGene00010845	M03C11.8	64	39.969	Caenorhabditis_elegans
ENSHCOG00000007848	smarcad1a	94	62.462	ENSCJAG00000006778	SMARCAD1	99	63.764	Callithrix_jacchus
ENSHCOG00000007848	smarcad1a	97	60.649	ENSCAFG00000010026	SMARCAD1	99	64.075	Canis_familiaris
ENSHCOG00000007848	smarcad1a	91	60.649	ENSCAFG00020003994	SMARCAD1	99	64.075	Canis_lupus_dingo
ENSHCOG00000007848	smarcad1a	92	62.462	ENSCHIG00000012905	SMARCAD1	99	63.764	Capra_hircus
ENSHCOG00000007848	smarcad1a	97	60.367	ENSTSYG00000002706	SMARCAD1	99	63.608	Carlito_syrichta
ENSHCOG00000007848	smarcad1a	79	52.301	ENSCAPG00000016744	SMARCAD1	82	57.188	Cavia_aperea
ENSHCOG00000007848	smarcad1a	75	60.367	ENSCPOG00000011398	SMARCAD1	84	63.608	Cavia_porcellus
ENSHCOG00000007848	smarcad1a	94	62.613	ENSCCAG00000022264	SMARCAD1	100	64.765	Cebus_capucinus
ENSHCOG00000007848	smarcad1a	98	59.306	ENSCATG00000035663	SMARCAD1	99	64.346	Cercocebus_atys
ENSHCOG00000007848	smarcad1a	76	59.306	ENSCSAG00000004186	SMARCAD1	99	63.764	Chlorocebus_sabaeus
ENSHCOG00000007848	smarcad1a	83	64.286	ENSCPBG00000013203	SMARCAD1	82	64.286	Chrysemys_picta_bellii
ENSHCOG00000007848	smarcad1a	59	48.476	ENSCING00000001688	-	97	48.607	Ciona_intestinalis
ENSHCOG00000007848	smarcad1a	98	59.167	ENSCANG00000003556	SMARCAD1	100	64.597	Colobus_angolensis_palliatus
ENSHCOG00000007848	smarcad1a	61	62.312	ENSCGRG00001015056	Smarcad1	99	63.297	Cricetulus_griseus_chok1gshd
ENSHCOG00000007848	smarcad1a	61	62.312	ENSCGRG00000014087	Smarcad1	99	63.297	Cricetulus_griseus_crigri
ENSHCOG00000007848	smarcad1a	100	60.647	ENSCSEG00000014419	-	99	61.596	Cynoglossus_semilaevis
ENSHCOG00000007848	smarcad1a	85	66.315	ENSCSEG00000017903	smarcad1a	100	60.781	Cynoglossus_semilaevis
ENSHCOG00000007848	smarcad1a	67	70.353	ENSDARG00000073721	smarcad1b	72	70.671	Danio_rerio
ENSHCOG00000007848	smarcad1a	94	62.913	ENSDNOG00000000806	-	99	64.230	Dasypus_novemcinctus
ENSHCOG00000007848	smarcad1a	65	59.028	ENSDORG00000012331	Smarcad1	99	63.453	Dipodomys_ordii
ENSHCOG00000007848	smarcad1a	59	45.649	FBgn0032157	Etl1	77	45.649	Drosophila_melanogaster
ENSHCOG00000007848	smarcad1a	60	46.305	ENSEBUG00000003969	smarcad1a	91	49.063	Eptatretus_burgeri
ENSHCOG00000007848	smarcad1a	97	60.508	ENSEASG00005012382	SMARCAD1	99	63.919	Equus_asinus_asinus
ENSHCOG00000007848	smarcad1a	97	60.508	ENSECAG00000011562	SMARCAD1	99	63.919	Equus_caballus
ENSHCOG00000007848	smarcad1a	100	57.296	ENSELUG00000018535	smarcad1a	100	56.328	Esox_lucius
ENSHCOG00000007848	smarcad1a	72	63.329	ENSELUG00000019154	smarcad1b	71	68.960	Esox_lucius
ENSHCOG00000007848	smarcad1a	98	59.722	ENSFCAG00000003958	SMARCAD1	100	64.933	Felis_catus
ENSHCOG00000007848	smarcad1a	61	63.852	ENSFALG00000006089	SMARCAD1	63	65.839	Ficedula_albicollis
ENSHCOG00000007848	smarcad1a	76	59.444	ENSFDAG00000017027	SMARCAD1	99	63.764	Fukomys_damarensis
ENSHCOG00000007848	smarcad1a	100	58.283	ENSFHEG00000012778	smarcad1a	100	59.217	Fundulus_heteroclitus
ENSHCOG00000007848	smarcad1a	86	73.603	ENSGMOG00000018995	smarcad1a	98	74.608	Gadus_morhua
ENSHCOG00000007848	smarcad1a	68	61.493	ENSGALG00000037339	SMARCAD1	87	63.281	Gallus_gallus
ENSHCOG00000007848	smarcad1a	100	58.681	ENSGAFG00000013498	smarcad1a	100	58.752	Gambusia_affinis
ENSHCOG00000007848	smarcad1a	78	75.348	ENSGACG00000007327	smarcad1a	99	75.070	Gasterosteus_aculeatus
ENSHCOG00000007848	smarcad1a	83	64.441	ENSGAGG00000008582	SMARCAD1	76	64.441	Gopherus_agassizii
ENSHCOG00000007848	smarcad1a	98	59.306	ENSGGOG00000023001	SMARCAD1	99	63.764	Gorilla_gorilla
ENSHCOG00000007848	smarcad1a	100	61.106	ENSHBUG00000011042	smarcad1a	100	61.744	Haplochromis_burtoni
ENSHCOG00000007848	smarcad1a	98	59.444	ENSHGLG00000005070	SMARCAD1	90	63.764	Heterocephalus_glaber_female
ENSHCOG00000007848	smarcad1a	98	59.444	ENSHGLG00100006812	SMARCAD1	90	63.764	Heterocephalus_glaber_male
ENSHCOG00000007848	smarcad1a	93	63.310	ENSIPUG00000000242	smarcad1a	98	53.321	Ictalurus_punctatus
ENSHCOG00000007848	smarcad1a	75	69.325	ENSIPUG00000022817	smarcad1b	86	70.330	Ictalurus_punctatus
ENSHCOG00000007848	smarcad1a	94	62.012	ENSSTOG00000001227	SMARCAD1	99	63.297	Ictidomys_tridecemlineatus
ENSHCOG00000007848	smarcad1a	91	59.583	ENSJJAG00000022342	Smarcad1	85	63.608	Jaculus_jaculus
ENSHCOG00000007848	smarcad1a	99	59.746	ENSKMAG00000021351	smarcad1a	87	66.311	Kryptolebias_marmoratus
ENSHCOG00000007848	smarcad1a	67	76.662	ENSLBEG00000008088	smarcad1a	99	61.504	Labrus_bergylta
ENSHCOG00000007848	smarcad1a	86	70.031	ENSLOCG00000012909	smarcad1a	93	71.115	Lepisosteus_oculatus
ENSHCOG00000007848	smarcad1a	94	60.961	ENSLAFG00000000040	SMARCAD1	99	62.208	Loxodonta_africana
ENSHCOG00000007848	smarcad1a	98	59.306	ENSMFAG00000042606	SMARCAD1	99	63.764	Macaca_fascicularis
ENSHCOG00000007848	smarcad1a	76	59.306	ENSMMUG00000022242	SMARCAD1	98	63.764	Macaca_mulatta
ENSHCOG00000007848	smarcad1a	98	59.306	ENSMNEG00000038117	SMARCAD1	100	64.597	Macaca_nemestrina
ENSHCOG00000007848	smarcad1a	98	59.306	ENSMLEG00000038333	SMARCAD1	100	64.597	Mandrillus_leucophaeus
ENSHCOG00000007848	smarcad1a	100	63.718	ENSMAMG00000000933	smarcad1a	100	63.782	Mastacembelus_armatus
ENSHCOG00000007848	smarcad1a	100	60.573	ENSMZEG00005005203	smarcad1a	100	61.394	Maylandia_zebra
ENSHCOG00000007848	smarcad1a	82	65.615	ENSMGAG00000005577	SMARCAD1	86	65.615	Meleagris_gallopavo
ENSHCOG00000007848	smarcad1a	92	62.462	ENSMAUG00000008417	Smarcad1	99	63.453	Mesocricetus_auratus
ENSHCOG00000007848	smarcad1a	97	60.420	ENSMICG00000009746	SMARCAD1	99	63.721	Microcebus_murinus
ENSHCOG00000007848	smarcad1a	66	58.445	ENSMOCG00000017142	Smarcad1	99	63.919	Microtus_ochrogaster
ENSHCOG00000007848	smarcad1a	64	78.378	ENSMMOG00000000275	smarcad1a	89	79.563	Mola_mola
ENSHCOG00000007848	smarcad1a	94	62.913	ENSMODG00000019268	SMARCAD1	99	64.230	Monodelphis_domestica
ENSHCOG00000007848	smarcad1a	84	58.289	MGP_CAROLIEiJ_G0028458	-	67	63.919	Mus_caroli
ENSHCOG00000007848	smarcad1a	61	62.332	ENSMUSG00000029920	Smarcad1	85	63.919	Mus_musculus
ENSHCOG00000007848	smarcad1a	87	62.332	MGP_PahariEiJ_G0022198	Smarcad1	99	63.919	Mus_pahari
ENSHCOG00000007848	smarcad1a	61	62.332	MGP_SPRETEiJ_G0029462	Smarcad1	63	63.919	Mus_spretus
ENSHCOG00000007848	smarcad1a	94	62.613	ENSMPUG00000002111	SMARCAD1	99	63.919	Mustela_putorius_furo
ENSHCOG00000007848	smarcad1a	77	60.056	ENSMLUG00000000425	SMARCAD1	79	63.566	Myotis_lucifugus
ENSHCOG00000007848	smarcad1a	98	58.333	ENSNGAG00000000810	Smarcad1	99	62.830	Nannospalax_galili
ENSHCOG00000007848	smarcad1a	63	76.531	ENSNBRG00000012749	smarcad1a	90	72.919	Neolamprologus_brichardi
ENSHCOG00000007848	smarcad1a	98	59.306	ENSNLEG00000014225	SMARCAD1	100	64.597	Nomascus_leucogenys
ENSHCOG00000007848	smarcad1a	98	59.306	ENSODEG00000004334	SMARCAD1	99	63.608	Octodon_degus
ENSHCOG00000007848	smarcad1a	85	80.187	ENSONIG00000015059	smarcad1a	99	80.187	Oreochromis_niloticus
ENSHCOG00000007848	smarcad1a	66	64.651	ENSOANG00000013764	SMARCAD1	91	64.651	Ornithorhynchus_anatinus
ENSHCOG00000007848	smarcad1a	98	59.167	ENSOCUG00000017283	SMARCAD1	99	63.608	Oryctolagus_cuniculus
ENSHCOG00000007848	smarcad1a	100	59.802	ENSORLG00000004869	smarcad1a	100	60.306	Oryzias_latipes
ENSHCOG00000007848	smarcad1a	100	59.622	ENSORLG00020020569	smarcad1a	100	59.659	Oryzias_latipes_hni
ENSHCOG00000007848	smarcad1a	100	59.249	ENSORLG00015009045	smarcad1a	100	59.375	Oryzias_latipes_hsok
ENSHCOG00000007848	smarcad1a	99	59.425	ENSOMEG00000023032	smarcad1a	99	59.355	Oryzias_melastigma
ENSHCOG00000007848	smarcad1a	99	59.290	ENSOGAG00000011444	SMARCAD1	99	63.411	Otolemur_garnettii
ENSHCOG00000007848	smarcad1a	92	62.462	ENSOARG00000017851	SMARCAD1	99	63.764	Ovis_aries
ENSHCOG00000007848	smarcad1a	98	59.306	ENSPPAG00000035715	SMARCAD1	99	63.764	Pan_paniscus
ENSHCOG00000007848	smarcad1a	65	59.722	ENSPPRG00000024756	SMARCAD1	100	64.933	Panthera_pardus
ENSHCOG00000007848	smarcad1a	65	59.557	ENSPTIG00000017868	SMARCAD1	99	63.876	Panthera_tigris_altaica
ENSHCOG00000007848	smarcad1a	98	59.306	ENSPTRG00000023126	SMARCAD1	100	64.597	Pan_troglodytes
ENSHCOG00000007848	smarcad1a	98	57.953	ENSPANG00000019757	SMARCAD1	99	63.715	Papio_anubis
ENSHCOG00000007848	smarcad1a	59	64.907	ENSPSIG00000010255	SMARCAD1	91	64.907	Pelodiscus_sinensis
ENSHCOG00000007848	smarcad1a	59	73.865	ENSPMGG00000010735	smarcad1a	91	73.865	Periophthalmus_magnuspinnatus
ENSHCOG00000007848	smarcad1a	64	52.468	ENSPEMG00000001854	Smarcad1	63	55.763	Peromyscus_maniculatus_bairdii
ENSHCOG00000007848	smarcad1a	76	53.453	ENSPMAG00000003516	smarcad1a	99	56.481	Petromyzon_marinus
ENSHCOG00000007848	smarcad1a	72	63.363	ENSPCIG00000008137	SMARCAD1	95	64.697	Phascolarctos_cinereus
ENSHCOG00000007848	smarcad1a	100	60.333	ENSPFOG00000019116	smarcad1a	100	59.545	Poecilia_formosa
ENSHCOG00000007848	smarcad1a	85	66.086	ENSPLAG00000000108	smarcad1a	100	59.930	Poecilia_latipinna
ENSHCOG00000007848	smarcad1a	100	60.420	ENSPMEG00000009155	smarcad1a	100	59.632	Poecilia_mexicana
ENSHCOG00000007848	smarcad1a	85	68.264	ENSPREG00000018185	smarcad1a	98	65.914	Poecilia_reticulata
ENSHCOG00000007848	smarcad1a	98	59.003	ENSPPYG00000014935	SMARCAD1	99	63.411	Pongo_abelii
ENSHCOG00000007848	smarcad1a	64	51.763	ENSPCOG00000020478	SMARCAD1	72	54.121	Propithecus_coquereli
ENSHCOG00000007848	smarcad1a	61	61.955	ENSPVAG00000001760	SMARCAD1	99	63.240	Pteropus_vampyrus
ENSHCOG00000007848	smarcad1a	68	72.919	ENSPNYG00000010087	smarcad1a	91	72.523	Pundamilia_nyererei
ENSHCOG00000007848	smarcad1a	73	67.103	ENSPNAG00000010099	smarcad1b	79	71.115	Pygocentrus_nattereri
ENSHCOG00000007848	smarcad1a	100	50.772	ENSPNAG00000001663	smarcad1a	100	51.589	Pygocentrus_nattereri
ENSHCOG00000007848	smarcad1a	87	62.631	ENSRNOG00000006391	Smarcad1	85	64.230	Rattus_norvegicus
ENSHCOG00000007848	smarcad1a	98	59.306	ENSRBIG00000041989	SMARCAD1	99	63.764	Rhinopithecus_bieti
ENSHCOG00000007848	smarcad1a	98	59.306	ENSRROG00000035309	SMARCAD1	99	63.764	Rhinopithecus_roxellana
ENSHCOG00000007848	smarcad1a	94	62.613	ENSSBOG00000032114	SMARCAD1	100	64.765	Saimiri_boliviensis_boliviensis
ENSHCOG00000007848	smarcad1a	94	63.063	ENSSHAG00000001279	SMARCAD1	99	64.386	Sarcophilus_harrisii
ENSHCOG00000007848	smarcad1a	85	57.573	ENSSFOG00015016814	smarcad1b	87	71.674	Scleropages_formosus
ENSHCOG00000007848	smarcad1a	67	63.514	ENSSFOG00015020909	smarcad1a	85	69.579	Scleropages_formosus
ENSHCOG00000007848	smarcad1a	100	63.628	ENSSMAG00000001326	smarcad1a	100	64.148	Scophthalmus_maximus
ENSHCOG00000007848	smarcad1a	69	74.836	ENSSDUG00000022338	smarcad1a	99	70.251	Seriola_dumerili
ENSHCOG00000007848	smarcad1a	100	61.170	ENSSLDG00000024986	smarcad1a	100	61.804	Seriola_lalandi_dorsalis
ENSHCOG00000007848	smarcad1a	54	65.662	ENSSPUG00000004633	SMARCAD1	100	65.662	Sphenodon_punctatus
ENSHCOG00000007848	smarcad1a	100	61.402	ENSSPAG00000001970	smarcad1a	100	63.749	Stegastes_partitus
ENSHCOG00000007848	smarcad1a	82	60.508	ENSSSCG00000009193	SMARCAD1	99	63.919	Sus_scrofa
ENSHCOG00000007848	smarcad1a	63	65.109	ENSTGUG00000003127	SMARCAD1	99	65.421	Taeniopygia_guttata
ENSHCOG00000007848	smarcad1a	83	76.000	ENSTNIG00000017585	smarcad1a	96	75.536	Tetraodon_nigroviridis
ENSHCOG00000007848	smarcad1a	56	66.270	ENSTBEG00000002789	SMARCAD1	58	66.270	Tupaia_belangeri
ENSHCOG00000007848	smarcad1a	92	62.219	ENSTTRG00000000226	SMARCAD1	92	63.509	Tursiops_truncatus
ENSHCOG00000007848	smarcad1a	64	60.508	ENSUAMG00000022262	SMARCAD1	67	63.911	Ursus_americanus
ENSHCOG00000007848	smarcad1a	64	60.508	ENSUMAG00000004549	SMARCAD1	63	63.919	Ursus_maritimus
ENSHCOG00000007848	smarcad1a	98	59.722	ENSVVUG00000007271	SMARCAD1	99	64.075	Vulpes_vulpes
ENSHCOG00000007848	smarcad1a	60	59.398	ENSXETG00000019214	smarcad1	73	60.031	Xenopus_tropicalis
ENSHCOG00000007848	smarcad1a	68	76.923	ENSXCOG00000005232	smarcad1a	82	76.339	Xiphophorus_couchianus
ENSHCOG00000007848	smarcad1a	100	60.190	ENSXMAG00000015350	smarcad1a	100	59.723	Xiphophorus_maculatus