EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007920 (Gene tree)
Gene ID: 109512990
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 21482 bases
Position: chrKV879835.1:1594243-1615724
Accession: 109512990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021239	RNase_T	PF00929.24	9.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004143	-	3976	XM_019865164	ENSHCOP00000021239	1207 (aa)	XP_019720723	UPI00094E7C67

Gene Model

Click here to download ENSHCOG00000007920's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007920	pan2	100	92.479	ENSAPOG00000022955	pan2	100	92.479	Acanthochromis_polyacanthus
ENSHCOG00000007920	pan2	99	75.226	ENSAMEG00000003824	PAN2	100	75.226	Ailuropoda_melanoleuca
ENSHCOG00000007920	pan2	99	88.824	ENSACIG00000013079	pan2	99	88.824	Amphilophus_citrinellus
ENSHCOG00000007920	pan2	98	70.483	ENSACIG00000012858	PAN2	99	70.483	Amphilophus_citrinellus
ENSHCOG00000007920	pan2	100	91.736	ENSAOCG00000022334	pan2	100	91.736	Amphiprion_ocellaris
ENSHCOG00000007920	pan2	100	91.901	ENSAPEG00000022760	pan2	100	91.901	Amphiprion_percula
ENSHCOG00000007920	pan2	99	92.333	ENSATEG00000024030	pan2	100	92.333	Anabas_testudineus
ENSHCOG00000007920	pan2	93	77.365	ENSAPLG00000005195	PAN2	100	77.365	Anas_platyrhynchos
ENSHCOG00000007920	pan2	99	76.092	ENSACAG00000007067	PAN2	100	76.092	Anolis_carolinensis
ENSHCOG00000007920	pan2	99	74.568	ENSANAG00000036468	PAN2	99	79.787	Aotus_nancymaae
ENSHCOG00000007920	pan2	98	69.030	ENSACLG00000023821	pan2	99	68.919	Astatotilapia_calliptera
ENSHCOG00000007920	pan2	100	90.909	ENSACLG00000023674	pan2	100	91.322	Astatotilapia_calliptera
ENSHCOG00000007920	pan2	99	85.643	ENSAMXG00000005418	pan2	98	85.643	Astyanax_mexicanus
ENSHCOG00000007920	pan2	99	74.897	ENSBTAG00000004376	PAN2	100	74.897	Bos_taurus
ENSHCOG00000007920	pan2	99	74.465	ENSCJAG00000011141	PAN2	100	74.465	Callithrix_jacchus
ENSHCOG00000007920	pan2	99	75.062	ENSCAFG00000000119	PAN2	100	77.863	Canis_familiaris
ENSHCOG00000007920	pan2	99	74.855	ENSCAFG00020024865	PAN2	100	74.257	Canis_lupus_dingo
ENSHCOG00000007920	pan2	99	74.260	ENSCHIG00000026935	PAN2	100	73.693	Capra_hircus
ENSHCOG00000007920	pan2	99	74.053	ENSTSYG00000006927	PAN2	99	79.787	Carlito_syrichta
ENSHCOG00000007920	pan2	99	74.529	ENSCPOG00000014918	PAN2	100	74.283	Cavia_porcellus
ENSHCOG00000007920	pan2	99	74.568	ENSCCAG00000036637	PAN2	99	79.787	Cebus_capucinus
ENSHCOG00000007920	pan2	99	74.486	ENSCATG00000045076	PAN2	99	80.214	Cercocebus_atys
ENSHCOG00000007920	pan2	99	74.732	ENSCLAG00000011700	PAN2	100	74.201	Chinchilla_lanigera
ENSHCOG00000007920	pan2	99	74.239	ENSCSAG00000005173	PAN2	100	74.239	Chlorocebus_sabaeus
ENSHCOG00000007920	pan2	99	76.936	ENSCPBG00000014029	PAN2	100	76.853	Chrysemys_picta_bellii
ENSHCOG00000007920	pan2	90	46.987	ENSCSAVG00000003833	-	99	51.717	Ciona_savignyi
ENSHCOG00000007920	pan2	99	72.944	ENSCANG00000017798	PAN2	100	72.944	Colobus_angolensis_palliatus
ENSHCOG00000007920	pan2	99	74.508	ENSCGRG00001019707	Pan2	100	74.508	Cricetulus_griseus_chok1gshd
ENSHCOG00000007920	pan2	99	73.718	ENSCGRG00000009996	Pan2	100	73.556	Cricetulus_griseus_crigri
ENSHCOG00000007920	pan2	100	86.446	ENSCSEG00000021529	pan2	100	86.446	Cynoglossus_semilaevis
ENSHCOG00000007920	pan2	100	89.587	ENSCVAG00000010197	pan2	100	89.587	Cyprinodon_variegatus
ENSHCOG00000007920	pan2	100	84.641	ENSDARG00000074675	pan2	100	84.393	Danio_rerio
ENSHCOG00000007920	pan2	99	75.021	ENSDNOG00000010940	PAN2	100	75.021	Dasypus_novemcinctus
ENSHCOG00000007920	pan2	98	41.024	FBgn0033352	PAN2	98	40.942	Drosophila_melanogaster
ENSHCOG00000007920	pan2	75	82.486	ENSETEG00000012041	PAN2	82	82.486	Echinops_telfairi
ENSHCOG00000007920	pan2	98	56.544	ENSEBUG00000002773	pan2	99	56.449	Eptatretus_burgeri
ENSHCOG00000007920	pan2	99	74.835	ENSEASG00005005235	PAN2	100	74.835	Equus_asinus_asinus
ENSHCOG00000007920	pan2	99	75.062	ENSECAG00000019814	PAN2	100	75.062	Equus_caballus
ENSHCOG00000007920	pan2	99	86.982	ENSELUG00000024604	pan2	99	86.982	Esox_lucius
ENSHCOG00000007920	pan2	99	74.979	ENSFCAG00000012021	PAN2	100	74.979	Felis_catus
ENSHCOG00000007920	pan2	99	76.647	ENSFALG00000000464	PAN2	99	75.990	Ficedula_albicollis
ENSHCOG00000007920	pan2	99	74.568	ENSFDAG00000017104	PAN2	100	74.162	Fukomys_damarensis
ENSHCOG00000007920	pan2	90	89.912	ENSFHEG00000000157	pan2	97	89.912	Fundulus_heteroclitus
ENSHCOG00000007920	pan2	100	86.281	ENSGMOG00000007249	pan2	99	86.281	Gadus_morhua
ENSHCOG00000007920	pan2	99	77.107	ENSGALG00000031512	PAN2	100	77.107	Gallus_gallus
ENSHCOG00000007920	pan2	100	89.752	ENSGAFG00000000284	pan2	100	89.752	Gambusia_affinis
ENSHCOG00000007920	pan2	100	88.779	ENSGACG00000010722	pan2	99	89.521	Gasterosteus_aculeatus
ENSHCOG00000007920	pan2	99	76.505	ENSGAGG00000007868	PAN2	100	76.422	Gopherus_agassizii
ENSHCOG00000007920	pan2	99	74.403	ENSGGOG00000009115	PAN2	99	80.214	Gorilla_gorilla
ENSHCOG00000007920	pan2	100	90.579	ENSHBUG00000005234	pan2	100	90.992	Haplochromis_burtoni
ENSHCOG00000007920	pan2	99	73.866	ENSHGLG00000005647	PAN2	99	73.702	Heterocephalus_glaber_female
ENSHCOG00000007920	pan2	99	73.537	ENSHGLG00100014057	PAN2	99	73.289	Heterocephalus_glaber_male
ENSHCOG00000007920	pan2	100	85.112	ENSIPUG00000011065	PAN2	100	85.029	Ictalurus_punctatus
ENSHCOG00000007920	pan2	94	74.745	ENSSTOG00000015974	PAN2	100	74.745	Ictidomys_tridecemlineatus
ENSHCOG00000007920	pan2	99	74.196	ENSJJAG00000013044	Pan2	98	74.196	Jaculus_jaculus
ENSHCOG00000007920	pan2	100	89.835	ENSKMAG00000006192	pan2	100	89.835	Kryptolebias_marmoratus
ENSHCOG00000007920	pan2	93	91.384	ENSLBEG00000015763	pan2	98	91.384	Labrus_bergylta
ENSHCOG00000007920	pan2	99	69.758	ENSLACG00000018694	PAN2	100	69.509	Latimeria_chalumnae
ENSHCOG00000007920	pan2	100	84.774	ENSLOCG00000004333	pan2	99	84.856	Lepisosteus_oculatus
ENSHCOG00000007920	pan2	99	72.645	ENSLAFG00000014873	PAN2	100	72.400	Loxodonta_africana
ENSHCOG00000007920	pan2	99	74.321	ENSMFAG00000002293	PAN2	99	80.214	Macaca_fascicularis
ENSHCOG00000007920	pan2	99	74.321	ENSMMUG00000013482	PAN2	100	76.250	Macaca_mulatta
ENSHCOG00000007920	pan2	99	74.403	ENSMNEG00000033264	PAN2	99	79.947	Macaca_nemestrina
ENSHCOG00000007920	pan2	99	74.486	ENSMLEG00000037388	PAN2	99	80.214	Mandrillus_leucophaeus
ENSHCOG00000007920	pan2	99	91.232	ENSMAMG00000001624	pan2	100	91.232	Mastacembelus_armatus
ENSHCOG00000007920	pan2	98	70.186	ENSMZEG00005026472	pan2	99	70.186	Maylandia_zebra
ENSHCOG00000007920	pan2	100	90.909	ENSMZEG00005026462	pan2	100	91.322	Maylandia_zebra
ENSHCOG00000007920	pan2	96	77.702	ENSMGAG00000001439	PAN2	100	77.702	Meleagris_gallopavo
ENSHCOG00000007920	pan2	99	74.302	ENSMAUG00000012602	Pan2	99	74.056	Mesocricetus_auratus
ENSHCOG00000007920	pan2	99	74.733	ENSMICG00000017661	PAN2	99	78.495	Microcebus_murinus
ENSHCOG00000007920	pan2	99	74.344	ENSMOCG00000007191	Pan2	100	74.344	Microtus_ochrogaster
ENSHCOG00000007920	pan2	99	91.319	ENSMMOG00000009313	pan2	97	91.319	Mola_mola
ENSHCOG00000007920	pan2	99	91.481	ENSMALG00000013377	pan2	100	91.481	Monopterus_albus
ENSHCOG00000007920	pan2	99	73.998	MGP_CAROLIEiJ_G0015930	Pan2	100	73.753	Mus_caroli
ENSHCOG00000007920	pan2	99	74.752	ENSMUSG00000005682	Pan2	99	74.503	Mus_musculus
ENSHCOG00000007920	pan2	99	74.080	MGP_PahariEiJ_G0031154	Pan2	100	73.835	Mus_pahari
ENSHCOG00000007920	pan2	99	74.712	MGP_SPRETEiJ_G0016755	Pan2	100	74.733	Mus_spretus
ENSHCOG00000007920	pan2	99	75.062	ENSMPUG00000001383	PAN2	100	75.062	Mustela_putorius_furo
ENSHCOG00000007920	pan2	99	74.568	ENSMLUG00000006737	PAN2	100	74.568	Myotis_lucifugus
ENSHCOG00000007920	pan2	99	74.547	ENSNGAG00000007930	Pan2	100	74.547	Nannospalax_galili
ENSHCOG00000007920	pan2	92	92.694	ENSNBRG00000006585	pan2	99	92.694	Neolamprologus_brichardi
ENSHCOG00000007920	pan2	99	70.221	ENSNLEG00000017499	PAN2	99	79.679	Nomascus_leucogenys
ENSHCOG00000007920	pan2	99	76.587	ENSMEUG00000010125	PAN2	100	76.587	Notamacropus_eugenii
ENSHCOG00000007920	pan2	99	74.038	ENSOPRG00000001468	PAN2	100	74.038	Ochotona_princeps
ENSHCOG00000007920	pan2	99	73.938	ENSODEG00000007203	PAN2	100	73.775	Octodon_degus
ENSHCOG00000007920	pan2	99	89.061	ENSONIG00000016732	pan2	100	89.061	Oreochromis_niloticus
ENSHCOG00000007920	pan2	81	67.195	ENSOANG00000005151	PAN2	99	67.133	Ornithorhynchus_anatinus
ENSHCOG00000007920	pan2	99	74.041	ENSOCUG00000007227	PAN2	100	73.796	Oryctolagus_cuniculus
ENSHCOG00000007920	pan2	99	88.347	ENSORLG00000015195	pan2	100	88.347	Oryzias_latipes
ENSHCOG00000007920	pan2	99	88.347	ENSORLG00020000277	pan2	100	88.347	Oryzias_latipes_hni
ENSHCOG00000007920	pan2	99	88.264	ENSORLG00015005193	pan2	100	88.264	Oryzias_latipes_hsok
ENSHCOG00000007920	pan2	99	88.512	ENSOMEG00000022087	pan2	100	88.512	Oryzias_melastigma
ENSHCOG00000007920	pan2	99	73.714	ENSOGAG00000030620	PAN2	100	73.469	Otolemur_garnettii
ENSHCOG00000007920	pan2	99	74.815	ENSOARG00000009379	PAN2	100	74.815	Ovis_aries
ENSHCOG00000007920	pan2	99	74.403	ENSPPAG00000001208	PAN2	99	80.214	Pan_paniscus
ENSHCOG00000007920	pan2	99	74.979	ENSPPRG00000021586	PAN2	100	74.979	Panthera_pardus
ENSHCOG00000007920	pan2	99	71.417	ENSPTIG00000012494	PAN2	100	71.417	Panthera_tigris_altaica
ENSHCOG00000007920	pan2	99	74.403	ENSPTRG00000052054	PAN2	99	80.214	Pan_troglodytes
ENSHCOG00000007920	pan2	92	76.097	ENSPANG00000018906	PAN2	99	80.214	Papio_anubis
ENSHCOG00000007920	pan2	100	85.525	ENSPKIG00000003973	pan2	100	85.525	Paramormyrops_kingsleyae
ENSHCOG00000007920	pan2	99	73.607	ENSPSIG00000003267	PAN2	100	73.607	Pelodiscus_sinensis
ENSHCOG00000007920	pan2	99	88.264	ENSPMGG00000023186	pan2	100	88.182	Periophthalmus_magnuspinnatus
ENSHCOG00000007920	pan2	99	73.800	ENSPEMG00000018505	Pan2	100	73.474	Peromyscus_maniculatus_bairdii
ENSHCOG00000007920	pan2	90	67.060	ENSPMAG00000004731	pan2	100	66.878	Petromyzon_marinus
ENSHCOG00000007920	pan2	99	76.631	ENSPCIG00000024643	PAN2	100	76.383	Phascolarctos_cinereus
ENSHCOG00000007920	pan2	100	89.835	ENSPFOG00000008392	pan2	100	89.835	Poecilia_formosa
ENSHCOG00000007920	pan2	100	89.752	ENSPLAG00000009198	pan2	100	89.752	Poecilia_latipinna
ENSHCOG00000007920	pan2	100	89.917	ENSPMEG00000001484	pan2	100	89.917	Poecilia_mexicana
ENSHCOG00000007920	pan2	100	90.000	ENSPREG00000000900	pan2	100	90.000	Poecilia_reticulata
ENSHCOG00000007920	pan2	87	76.794	ENSPPYG00000004656	PAN2	98	77.174	Pongo_abelii
ENSHCOG00000007920	pan2	92	76.391	ENSPCAG00000011047	PAN2	99	76.391	Procavia_capensis
ENSHCOG00000007920	pan2	99	74.650	ENSPCOG00000018263	PAN2	100	74.650	Propithecus_coquereli
ENSHCOG00000007920	pan2	94	73.077	ENSPVAG00000007591	PAN2	94	73.077	Pteropus_vampyrus
ENSHCOG00000007920	pan2	99	91.022	ENSPNYG00000002629	pan2	99	91.438	Pundamilia_nyererei
ENSHCOG00000007920	pan2	100	86.942	ENSPNAG00000027140	pan2	100	86.942	Pygocentrus_nattereri
ENSHCOG00000007920	pan2	99	74.650	ENSRNOG00000032441	Pan2	100	74.403	Rattus_norvegicus
ENSHCOG00000007920	pan2	99	74.239	ENSRBIG00000029591	PAN2	99	79.679	Rhinopithecus_bieti
ENSHCOG00000007920	pan2	99	74.156	ENSRROG00000041950	PAN2	99	79.679	Rhinopithecus_roxellana
ENSHCOG00000007920	pan2	99	74.486	ENSSBOG00000027343	PAN2	99	79.787	Saimiri_boliviensis_boliviensis
ENSHCOG00000007920	pan2	92	76.868	ENSSHAG00000000122	PAN2	99	77.976	Sarcophilus_harrisii
ENSHCOG00000007920	pan2	100	85.785	ENSSFOG00015017740	pan2	100	85.785	Scleropages_formosus
ENSHCOG00000007920	pan2	100	90.759	ENSSMAG00000020901	pan2	100	91.007	Scophthalmus_maximus
ENSHCOG00000007920	pan2	100	92.645	ENSSDUG00000001840	pan2	100	92.645	Seriola_dumerili
ENSHCOG00000007920	pan2	100	92.479	ENSSLDG00000013866	pan2	100	92.479	Seriola_lalandi_dorsalis
ENSHCOG00000007920	pan2	92	75.277	ENSSARG00000013350	PAN2	92	75.277	Sorex_araneus
ENSHCOG00000007920	pan2	92	78.257	ENSSPUG00000004270	PAN2	99	78.167	Sphenodon_punctatus
ENSHCOG00000007920	pan2	100	92.479	ENSSPAG00000019970	pan2	100	92.479	Stegastes_partitus
ENSHCOG00000007920	pan2	99	74.650	ENSSSCG00000000393	PAN2	100	74.650	Sus_scrofa
ENSHCOG00000007920	pan2	100	89.504	ENSTRUG00000014260	pan2	100	89.504	Takifugu_rubripes
ENSHCOG00000007920	pan2	100	90.083	ENSTNIG00000012537	pan2	99	90.083	Tetraodon_nigroviridis
ENSHCOG00000007920	pan2	80	74.339	ENSTTRG00000007150	PAN2	80	74.339	Tursiops_truncatus
ENSHCOG00000007920	pan2	99	74.918	ENSUAMG00000026522	PAN2	100	74.918	Ursus_americanus
ENSHCOG00000007920	pan2	99	74.428	ENSUMAG00000017020	PAN2	100	74.428	Ursus_maritimus
ENSHCOG00000007920	pan2	79	89.655	ENSVPAG00000007309	PAN2	85	89.655	Vicugna_pacos
ENSHCOG00000007920	pan2	99	75.144	ENSVVUG00000021878	PAN2	100	75.144	Vulpes_vulpes
ENSHCOG00000007920	pan2	98	74.621	ENSXETG00000009434	pan2	100	74.621	Xenopus_tropicalis
ENSHCOG00000007920	pan2	99	84.711	ENSXCOG00000014391	pan2	100	84.711	Xiphophorus_couchianus
ENSHCOG00000007920	pan2	100	89.835	ENSXMAG00000011661	pan2	100	89.835	Xiphophorus_maculatus