EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000007987 (Gene tree)
Gene ID: 109513012
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5213 bases
Position: chrKV879835.1:1561490-1566702
Accession: 109513012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006225	Mago-bind	PF09282.10	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000004021	-	1743	XM_019865199	ENSHCOP00000006225	238 (aa)	XP_019720758	-

Gene Model

Click here to download ENSHCOG00000007987's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG
hcq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000007987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000007987	pym1	80	58.081	ENSG00000170473	PYM1	99	57.619	Homo_sapiens
ENSHCOG00000007987	pym1	86	73.239	ENSAPOG00000023045	pym1	100	73.239	Acanthochromis_polyacanthus
ENSHCOG00000007987	pym1	79	55.670	ENSAMEG00000003091	PYM1	97	55.340	Ailuropoda_melanoleuca
ENSHCOG00000007987	pym1	86	72.897	ENSACIG00000012769	pym1	100	72.897	Amphilophus_citrinellus
ENSHCOG00000007987	pym1	86	70.892	ENSAOCG00000021358	pym1	100	71.831	Amphiprion_ocellaris
ENSHCOG00000007987	pym1	86	70.892	ENSAPEG00000022679	pym1	100	71.831	Amphiprion_percula
ENSHCOG00000007987	pym1	86	69.014	ENSATEG00000024022	pym1	99	70.952	Anabas_testudineus
ENSHCOG00000007987	pym1	81	57.143	ENSACAG00000005714	PYM1	99	57.273	Anolis_carolinensis
ENSHCOG00000007987	pym1	80	57.576	ENSANAG00000036967	PYM1	99	57.143	Aotus_nancymaae
ENSHCOG00000007987	pym1	86	61.463	ENSAMXG00000007650	pym1	99	60.766	Astyanax_mexicanus
ENSHCOG00000007987	pym1	80	57.426	ENSBTAG00000031146	PYM1	99	57.009	Bos_taurus
ENSHCOG00000007987	pym1	80	58.081	ENSCJAG00000041077	PYM1	99	57.619	Callithrix_jacchus
ENSHCOG00000007987	pym1	80	58.416	ENSCAFG00000000076	PYM1	99	57.944	Canis_familiaris
ENSHCOG00000007987	pym1	80	58.416	ENSCAFG00020026099	PYM1	99	57.944	Canis_lupus_dingo
ENSHCOG00000007987	pym1	80	57.426	ENSCHIG00000026207	PYM1	99	57.009	Capra_hircus
ENSHCOG00000007987	pym1	80	57.576	ENSTSYG00000000787	PYM1	99	57.143	Carlito_syrichta
ENSHCOG00000007987	pym1	75	57.065	ENSCAPG00000010374	PYM1	98	56.633	Cavia_aperea
ENSHCOG00000007987	pym1	80	58.673	ENSCPOG00000031546	PYM1	99	58.173	Cavia_porcellus
ENSHCOG00000007987	pym1	80	58.081	ENSCCAG00000026187	PYM1	99	57.619	Cebus_capucinus
ENSHCOG00000007987	pym1	80	58.586	ENSCATG00000018801	PYM1	99	58.095	Cercocebus_atys
ENSHCOG00000007987	pym1	80	56.931	ENSCLAG00000007964	PYM1	99	57.009	Chinchilla_lanigera
ENSHCOG00000007987	pym1	76	57.219	ENSCSAG00000005291	PYM1	97	56.784	Chlorocebus_sabaeus
ENSHCOG00000007987	pym1	84	38.571	ENSCING00000006448	-	99	37.915	Ciona_intestinalis
ENSHCOG00000007987	pym1	84	39.091	ENSCSAVG00000009805	-	94	40.724	Ciona_savignyi
ENSHCOG00000007987	pym1	81	56.000	ENSCANG00000019757	-	87	56.000	Colobus_angolensis_palliatus
ENSHCOG00000007987	pym1	80	58.586	ENSCANG00000020338	-	99	58.095	Colobus_angolensis_palliatus
ENSHCOG00000007987	pym1	82	53.500	ENSCGRG00001004231	-	98	53.521	Cricetulus_griseus_chok1gshd
ENSHCOG00000007987	pym1	80	59.487	ENSCGRG00001018051	-	99	58.937	Cricetulus_griseus_chok1gshd
ENSHCOG00000007987	pym1	82	53.500	ENSCGRG00000018933	-	98	53.521	Cricetulus_griseus_crigri
ENSHCOG00000007987	pym1	80	59.487	ENSCGRG00000012495	-	99	58.937	Cricetulus_griseus_crigri
ENSHCOG00000007987	pym1	81	66.667	ENSCSEG00000021531	pym1	100	68.269	Cynoglossus_semilaevis
ENSHCOG00000007987	pym1	89	66.364	ENSCVAG00000017360	pym1	92	66.364	Cyprinodon_variegatus
ENSHCOG00000007987	pym1	86	58.252	ENSDARG00000046024	pym1	100	58.252	Danio_rerio
ENSHCOG00000007987	pym1	81	55.610	ENSDNOG00000048414	PYM1	92	55.300	Dasypus_novemcinctus
ENSHCOG00000007987	pym1	80	57.143	ENSDORG00000029448	Pym1	99	56.731	Dipodomys_ordii
ENSHCOG00000007987	pym1	85	31.250	FBgn0034918	Pym	98	33.180	Drosophila_melanogaster
ENSHCOG00000007987	pym1	76	51.832	ENSETEG00000004461	-	98	51.724	Echinops_telfairi
ENSHCOG00000007987	pym1	81	53.030	ENSEASG00005002271	PYM1	92	53.302	Equus_asinus_asinus
ENSHCOG00000007987	pym1	80	58.163	ENSECAG00000011870	PYM1	99	58.095	Equus_caballus
ENSHCOG00000007987	pym1	82	59.901	ENSELUG00000024250	pym1	100	60.377	Esox_lucius
ENSHCOG00000007987	pym1	80	57.921	ENSFCAG00000013967	PYM1	99	57.477	Felis_catus
ENSHCOG00000007987	pym1	80	59.091	ENSFDAG00000006314	PYM1	99	58.571	Fukomys_damarensis
ENSHCOG00000007987	pym1	80	69.307	ENSFHEG00000005884	pym1	100	68.056	Fundulus_heteroclitus
ENSHCOG00000007987	pym1	80	61.340	ENSGMOG00000007239	pym1	97	61.765	Gadus_morhua
ENSHCOG00000007987	pym1	81	60.000	ENSGALG00000046169	PYM1	99	59.813	Gallus_gallus
ENSHCOG00000007987	pym1	86	71.429	ENSGAFG00000003280	pym1	100	71.429	Gambusia_affinis
ENSHCOG00000007987	pym1	86	63.507	ENSGACG00000010703	pym1	100	64.455	Gasterosteus_aculeatus
ENSHCOG00000007987	pym1	79	54.502	ENSGAGG00000001973	PYM1	88	57.005	Gopherus_agassizii
ENSHCOG00000007987	pym1	80	58.081	ENSGGOG00000043246	PYM1	99	57.619	Gorilla_gorilla
ENSHCOG00000007987	pym1	81	73.438	ENSHBUG00000012719	pym1	100	72.683	Haplochromis_burtoni
ENSHCOG00000007987	pym1	80	58.586	ENSHGLG00000017155	PYM1	99	58.095	Heterocephalus_glaber_female
ENSHCOG00000007987	pym1	80	58.586	ENSHGLG00100015341	PYM1	99	58.095	Heterocephalus_glaber_male
ENSHCOG00000007987	pym1	85	62.255	ENSIPUG00000005975	wibga	99	60.784	Ictalurus_punctatus
ENSHCOG00000007987	pym1	80	59.391	ENSSTOG00000014206	PYM1	99	58.852	Ictidomys_tridecemlineatus
ENSHCOG00000007987	pym1	80	57.789	ENSJJAG00000013338	Pym1	99	57.346	Jaculus_jaculus
ENSHCOG00000007987	pym1	85	70.642	ENSKMAG00000006351	pym1	99	70.183	Kryptolebias_marmoratus
ENSHCOG00000007987	pym1	86	69.484	ENSLBEG00000015707	pym1	100	69.014	Labrus_bergylta
ENSHCOG00000007987	pym1	77	56.219	ENSLACG00000014398	PYM1	93	59.242	Latimeria_chalumnae
ENSHCOG00000007987	pym1	80	58.163	ENSLAFG00000002369	PYM1	99	57.692	Loxodonta_africana
ENSHCOG00000007987	pym1	80	58.586	ENSMFAG00000003048	PYM1	99	58.095	Macaca_fascicularis
ENSHCOG00000007987	pym1	80	58.586	ENSMMUG00000011002	PYM1	99	58.095	Macaca_mulatta
ENSHCOG00000007987	pym1	80	58.586	ENSMNEG00000034677	PYM1	99	58.095	Macaca_nemestrina
ENSHCOG00000007987	pym1	80	58.586	ENSMLEG00000007971	PYM1	99	58.095	Mandrillus_leucophaeus
ENSHCOG00000007987	pym1	86	70.776	ENSMAMG00000001588	pym1	100	70.776	Mastacembelus_armatus
ENSHCOG00000007987	pym1	81	72.917	ENSMZEG00005026458	pym1	100	72.195	Maylandia_zebra
ENSHCOG00000007987	pym1	81	58.883	ENSMAUG00000007318	Pym1	99	58.937	Mesocricetus_auratus
ENSHCOG00000007987	pym1	80	56.931	ENSMICG00000032962	PYM1	99	56.542	Microcebus_murinus
ENSHCOG00000007987	pym1	80	57.216	ENSMOCG00000010208	Pym1	99	57.767	Microtus_ochrogaster
ENSHCOG00000007987	pym1	86	65.217	ENSMMOG00000009301	pym1	100	66.667	Mola_mola
ENSHCOG00000007987	pym1	86	69.302	ENSMALG00000013496	pym1	100	70.233	Monopterus_albus
ENSHCOG00000007987	pym1	80	60.714	MGP_CAROLIEiJ_G0015953	Pym1	99	60.096	Mus_caroli
ENSHCOG00000007987	pym1	80	60.204	ENSMUSG00000064030	Pym1	99	59.615	Mus_musculus
ENSHCOG00000007987	pym1	81	60.606	MGP_PahariEiJ_G0031131	Pym1	98	60.577	Mus_pahari
ENSHCOG00000007987	pym1	80	60.204	MGP_SPRETEiJ_G0016778	Pym1	99	59.615	Mus_spretus
ENSHCOG00000007987	pym1	80	59.391	ENSMPUG00000000931	PYM1	99	58.852	Mustela_putorius_furo
ENSHCOG00000007987	pym1	81	52.941	ENSMLUG00000003586	PYM1	99	53.521	Myotis_lucifugus
ENSHCOG00000007987	pym1	76	55.851	ENSNGAG00000019207	Pym1	92	55.500	Nannospalax_galili
ENSHCOG00000007987	pym1	86	71.362	ENSNBRG00000006951	pym1	100	71.362	Neolamprologus_brichardi
ENSHCOG00000007987	pym1	80	58.081	ENSNLEG00000017588	PYM1	99	57.619	Nomascus_leucogenys
ENSHCOG00000007987	pym1	77	53.093	ENSMEUG00000001017	PYM1	98	54.412	Notamacropus_eugenii
ENSHCOG00000007987	pym1	77	56.614	ENSOPRG00000007797	PYM1	96	55.665	Ochotona_princeps
ENSHCOG00000007987	pym1	80	57.426	ENSODEG00000004289	PYM1	99	57.009	Octodon_degus
ENSHCOG00000007987	pym1	80	71.642	ENSONIG00000016740	pym1	100	71.163	Oreochromis_niloticus
ENSHCOG00000007987	pym1	82	52.427	ENSOCUG00000025969	PYM1	91	52.294	Oryctolagus_cuniculus
ENSHCOG00000007987	pym1	86	69.484	ENSORLG00000030592	pym1	100	69.484	Oryzias_latipes
ENSHCOG00000007987	pym1	86	69.484	ENSORLG00020011264	pym1	100	69.484	Oryzias_latipes_hni
ENSHCOG00000007987	pym1	86	70.892	ENSORLG00015005287	pym1	100	70.892	Oryzias_latipes_hsok
ENSHCOG00000007987	pym1	86	68.372	ENSOMEG00000022250	pym1	100	68.837	Oryzias_melastigma
ENSHCOG00000007987	pym1	76	56.021	ENSOGAG00000007038	PYM1	93	55.665	Otolemur_garnettii
ENSHCOG00000007987	pym1	80	58.163	ENSOARG00000010856	PYM1	99	57.692	Ovis_aries
ENSHCOG00000007987	pym1	80	58.081	ENSPPAG00000043630	PYM1	99	57.619	Pan_paniscus
ENSHCOG00000007987	pym1	80	59.596	ENSPPRG00000013243	PYM1	99	59.048	Panthera_pardus
ENSHCOG00000007987	pym1	80	59.091	ENSPTIG00000017380	PYM1	99	57.009	Panthera_tigris_altaica
ENSHCOG00000007987	pym1	80	58.081	ENSPTRG00000005067	PYM1	99	57.619	Pan_troglodytes
ENSHCOG00000007987	pym1	80	58.673	ENSPANG00000009562	PYM1	99	58.173	Papio_anubis
ENSHCOG00000007987	pym1	85	65.094	ENSPKIG00000006301	pym1	99	65.094	Paramormyrops_kingsleyae
ENSHCOG00000007987	pym1	81	53.589	ENSPSIG00000003043	PYM1	99	53.881	Pelodiscus_sinensis
ENSHCOG00000007987	pym1	85	66.176	ENSPMGG00000023161	pym1	98	66.176	Periophthalmus_magnuspinnatus
ENSHCOG00000007987	pym1	80	58.974	ENSPEMG00000009372	Pym1	99	59.903	Peromyscus_maniculatus_bairdii
ENSHCOG00000007987	pym1	76	54.054	ENSPCIG00000024658	PYM1	96	53.140	Phascolarctos_cinereus
ENSHCOG00000007987	pym1	86	72.642	ENSPFOG00000008193	pym1	100	72.170	Poecilia_formosa
ENSHCOG00000007987	pym1	86	72.222	ENSPLAG00000009228	pym1	100	71.759	Poecilia_latipinna
ENSHCOG00000007987	pym1	86	72.222	ENSPMEG00000001505	pym1	100	71.759	Poecilia_mexicana
ENSHCOG00000007987	pym1	76	55.729	ENSPPYG00000004635	PYM1	97	55.392	Pongo_abelii
ENSHCOG00000007987	pym1	80	58.163	ENSPCOG00000019706	PYM1	99	57.692	Propithecus_coquereli
ENSHCOG00000007987	pym1	76	57.447	ENSPVAG00000011437	PYM1	97	57.000	Pteropus_vampyrus
ENSHCOG00000007987	pym1	81	72.917	ENSPNYG00000012871	pym1	100	72.195	Pundamilia_nyererei
ENSHCOG00000007987	pym1	86	61.244	ENSPNAG00000018833	pym1	99	65.550	Pygocentrus_nattereri
ENSHCOG00000007987	pym1	79	57.513	ENSRNOG00000058130	Pym1	97	57.561	Rattus_norvegicus
ENSHCOG00000007987	pym1	68	51.515	ENSRNOG00000049415	AABR07055413.1	98	47.317	Rattus_norvegicus
ENSHCOG00000007987	pym1	80	54.545	ENSRBIG00000033362	PYM1	98	54.286	Rhinopithecus_bieti
ENSHCOG00000007987	pym1	80	58.586	ENSRROG00000043620	PYM1	99	58.095	Rhinopithecus_roxellana
ENSHCOG00000007987	pym1	80	58.081	ENSSBOG00000029393	PYM1	99	57.619	Saimiri_boliviensis_boliviensis
ENSHCOG00000007987	pym1	81	55.340	ENSSHAG00000008280	PYM1	99	55.814	Sarcophilus_harrisii
ENSHCOG00000007987	pym1	80	60.930	ENSSFOG00015021475	pym1	100	60.435	Scleropages_formosus
ENSHCOG00000007987	pym1	86	74.163	ENSSMAG00000020912	pym1	100	74.163	Scophthalmus_maximus
ENSHCOG00000007987	pym1	86	71.628	ENSSDUG00000001807	pym1	100	72.558	Seriola_dumerili
ENSHCOG00000007987	pym1	86	70.968	ENSSLDG00000013730	pym1	100	71.889	Seriola_lalandi_dorsalis
ENSHCOG00000007987	pym1	76	54.639	ENSSARG00000009569	PYM1	98	54.680	Sorex_araneus
ENSHCOG00000007987	pym1	78	54.774	ENSSPUG00000015059	PYM1	96	55.288	Sphenodon_punctatus
ENSHCOG00000007987	pym1	86	71.759	ENSSPAG00000020100	pym1	100	73.611	Stegastes_partitus
ENSHCOG00000007987	pym1	80	57.921	ENSSSCG00000040825	PYM1	99	57.477	Sus_scrofa
ENSHCOG00000007987	pym1	85	69.048	ENSTRUG00000021367	pym1	99	70.952	Takifugu_rubripes
ENSHCOG00000007987	pym1	86	62.264	ENSTNIG00000012534	pym1	100	67.453	Tetraodon_nigroviridis
ENSHCOG00000007987	pym1	76	54.054	ENSTBEG00000004208	PYM1	98	53.807	Tupaia_belangeri
ENSHCOG00000007987	pym1	76	57.812	ENSTTRG00000014971	PYM1	97	57.353	Tursiops_truncatus
ENSHCOG00000007987	pym1	80	58.673	ENSUAMG00000014521	PYM1	99	58.173	Ursus_americanus
ENSHCOG00000007987	pym1	81	54.040	ENSUMAG00000016241	PYM1	91	53.810	Ursus_maritimus
ENSHCOG00000007987	pym1	80	58.416	ENSVVUG00000022749	PYM1	99	57.477	Vulpes_vulpes
ENSHCOG00000007987	pym1	81	61.929	ENSXETG00000021850	pym1	99	61.611	Xenopus_tropicalis
ENSHCOG00000007987	pym1	86	70.833	ENSXMAG00000011649	pym1	100	70.370	Xiphophorus_maculatus