EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000008010 (Gene tree)
Gene ID: 109519562
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10255 bases
Position: chrKV880073.1:65792-76046
Accession: 109519562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021299	Ribosomal_L7Ae	PF01248.26	5.7e-19	1	1
ENSHCOP00000006245	Ribosomal_L7Ae	PF01248.26	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003989	-	4716	-	ENSHCOP00000006245	710 (aa)	-	-
ENSHCOT00000004001	-	2789	XM_019876168	ENSHCOP00000021299	693 (aa)	XP_019731727	-

Gene Model

Click here to download ENSHCOG00000008010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008010	secisbp2	56	52.488	ENSG00000187742	SECISBP2	50	52.488	Homo_sapiens
ENSHCOG00000008010	secisbp2	63	39.140	ENSG00000138593	SECISBP2L	56	44.290	Homo_sapiens
ENSHCOG00000008010	secisbp2	85	50.601	ENSAPOG00000005939	secisbp2	81	52.374	Acanthochromis_polyacanthus
ENSHCOG00000008010	secisbp2	60	58.993	ENSACIG00000024185	secisbp2	65	70.093	Amphilophus_citrinellus
ENSHCOG00000008010	secisbp2	85	52.469	ENSAOCG00000019052	secisbp2	81	52.207	Amphiprion_ocellaris
ENSHCOG00000008010	secisbp2	85	52.160	ENSAPEG00000012971	secisbp2	81	52.187	Amphiprion_percula
ENSHCOG00000008010	secisbp2	92	51.182	ENSATEG00000001095	secisbp2	90	50.975	Anabas_testudineus
ENSHCOG00000008010	secisbp2	63	47.899	ENSAPLG00000013053	SECISBP2	54	48.421	Anas_platyrhynchos
ENSHCOG00000008010	secisbp2	81	39.039	ENSACAG00000016594	SECISBP2	77	40.060	Anolis_carolinensis
ENSHCOG00000008010	secisbp2	84	52.080	ENSACLG00000019976	secisbp2	82	50.689	Astatotilapia_calliptera
ENSHCOG00000008010	secisbp2	74	51.505	ENSAMXG00000015953	secisbp2	81	48.837	Astyanax_mexicanus
ENSHCOG00000008010	secisbp2	58	52.871	ENSBTAG00000001939	SECISBP2	53	52.871	Bos_taurus
ENSHCOG00000008010	secisbp2	55	53.030	ENSTSYG00000014119	SECISBP2	51	52.593	Carlito_syrichta
ENSHCOG00000008010	secisbp2	84	52.077	ENSCVAG00000015876	secisbp2	81	52.077	Cyprinodon_variegatus
ENSHCOG00000008010	secisbp2	63	57.143	ENSDARG00000073892	secisbp2	88	55.823	Danio_rerio
ENSHCOG00000008010	secisbp2	50	43.626	ENSEBUG00000008208	secisbp2	93	43.626	Eptatretus_burgeri
ENSHCOG00000008010	secisbp2	53	59.079	ENSELUG00000014795	-	81	59.079	Esox_lucius
ENSHCOG00000008010	secisbp2	56	52.985	ENSFCAG00000004214	SECISBP2	51	52.580	Felis_catus
ENSHCOG00000008010	secisbp2	69	44.144	ENSFALG00000012441	SECISBP2	61	46.168	Ficedula_albicollis
ENSHCOG00000008010	secisbp2	89	50.655	ENSFHEG00000004095	secisbp2	86	50.509	Fundulus_heteroclitus
ENSHCOG00000008010	secisbp2	63	45.753	ENSGALG00000010694	SECISBP2	54	44.961	Gallus_gallus
ENSHCOG00000008010	secisbp2	82	53.398	ENSGAFG00000016947	secisbp2	78	53.398	Gambusia_affinis
ENSHCOG00000008010	secisbp2	78	54.484	ENSGACG00000013757	secisbp2	93	54.484	Gasterosteus_aculeatus
ENSHCOG00000008010	secisbp2	82	49.373	ENSIPUG00000015393	secisbp2	81	49.530	Ictalurus_punctatus
ENSHCOG00000008010	secisbp2	80	54.651	ENSKMAG00000007129	secisbp2	79	54.651	Kryptolebias_marmoratus
ENSHCOG00000008010	secisbp2	92	48.634	ENSLBEG00000026023	secisbp2	90	48.634	Labrus_bergylta
ENSHCOG00000008010	secisbp2	56	53.623	ENSLACG00000005735	SECISBP2	84	51.101	Latimeria_chalumnae
ENSHCOG00000008010	secisbp2	65	56.879	ENSLOCG00000011742	secisbp2	83	57.819	Lepisosteus_oculatus
ENSHCOG00000008010	secisbp2	56	51.351	ENSMFAG00000003045	SECISBP2	50	51.351	Macaca_fascicularis
ENSHCOG00000008010	secisbp2	56	51.597	ENSMMUG00000012532	SECISBP2	50	51.597	Macaca_mulatta
ENSHCOG00000008010	secisbp2	56	51.106	ENSMNEG00000031737	SECISBP2	50	51.106	Macaca_nemestrina
ENSHCOG00000008010	secisbp2	56	51.351	ENSMLEG00000028868	SECISBP2	50	51.351	Mandrillus_leucophaeus
ENSHCOG00000008010	secisbp2	86	51.589	ENSMAMG00000006644	secisbp2	81	52.049	Mastacembelus_armatus
ENSHCOG00000008010	secisbp2	84	52.080	ENSMZEG00005013614	secisbp2	82	50.689	Maylandia_zebra
ENSHCOG00000008010	secisbp2	56	51.716	ENSMICG00000001176	SECISBP2	50	51.961	Microcebus_murinus
ENSHCOG00000008010	secisbp2	83	53.521	ENSMALG00000004907	secisbp2	81	53.678	Monopterus_albus
ENSHCOG00000008010	secisbp2	57	52.605	ENSMPUG00000008495	-	74	52.323	Mustela_putorius_furo
ENSHCOG00000008010	secisbp2	84	52.769	ENSNBRG00000022804	secisbp2	81	51.389	Neolamprologus_brichardi
ENSHCOG00000008010	secisbp2	58	62.954	ENSONIG00000016931	secisbp2	87	66.472	Oreochromis_niloticus
ENSHCOG00000008010	secisbp2	86	51.752	ENSORLG00000000343	secisbp2	90	50.796	Oryzias_latipes
ENSHCOG00000008010	secisbp2	83	52.217	ENSORLG00020012878	secisbp2	88	51.232	Oryzias_latipes_hni
ENSHCOG00000008010	secisbp2	79	53.173	ENSORLG00015004559	secisbp2	77	52.144	Oryzias_latipes_hsok
ENSHCOG00000008010	secisbp2	94	48.029	ENSOMEG00000008595	secisbp2	90	48.235	Oryzias_melastigma
ENSHCOG00000008010	secisbp2	56	52.736	ENSPTRG00000021094	SECISBP2	50	52.736	Pan_troglodytes
ENSHCOG00000008010	secisbp2	82	47.059	ENSPKIG00000006499	SECISBP2	79	46.903	Paramormyrops_kingsleyae
ENSHCOG00000008010	secisbp2	74	40.519	ENSPSIG00000016257	SECISBP2	72	41.286	Pelodiscus_sinensis
ENSHCOG00000008010	secisbp2	82	54.194	ENSPFOG00000008146	secisbp2	87	54.259	Poecilia_formosa
ENSHCOG00000008010	secisbp2	82	54.662	ENSPMEG00000013702	secisbp2	80	54.414	Poecilia_mexicana
ENSHCOG00000008010	secisbp2	82	53.784	ENSPREG00000008117	secisbp2	80	53.784	Poecilia_reticulata
ENSHCOG00000008010	secisbp2	84	52.080	ENSPNYG00000016799	secisbp2	82	50.689	Pundamilia_nyererei
ENSHCOG00000008010	secisbp2	67	56.667	ENSPNAG00000029922	secisbp2	70	56.863	Pygocentrus_nattereri
ENSHCOG00000008010	secisbp2	56	51.597	ENSSBOG00000015392	SECISBP2	52	51.597	Saimiri_boliviensis_boliviensis
ENSHCOG00000008010	secisbp2	82	48.855	ENSSFOG00015010409	secisbp2	79	48.714	Scleropages_formosus
ENSHCOG00000008010	secisbp2	83	52.879	ENSSMAG00000008472	secisbp2	91	53.821	Scophthalmus_maximus
ENSHCOG00000008010	secisbp2	85	52.861	ENSSDUG00000002089	secisbp2	85	52.861	Seriola_dumerili
ENSHCOG00000008010	secisbp2	85	53.172	ENSSLDG00000003510	secisbp2	81	52.870	Seriola_lalandi_dorsalis
ENSHCOG00000008010	secisbp2	79	42.079	ENSSPUG00000009635	SECISBP2	81	40.487	Sphenodon_punctatus
ENSHCOG00000008010	secisbp2	95	50.670	ENSSPAG00000013606	secisbp2	91	50.804	Stegastes_partitus
ENSHCOG00000008010	secisbp2	66	47.551	ENSTGUG00000000440	SECISBP2	75	51.667	Taeniopygia_guttata
ENSHCOG00000008010	secisbp2	86	48.795	ENSTRUG00000016835	secisbp2	91	48.795	Takifugu_rubripes
ENSHCOG00000008010	secisbp2	60	61.098	ENSTNIG00000015576	secisbp2	88	61.163	Tetraodon_nigroviridis
ENSHCOG00000008010	secisbp2	67	46.443	ENSXETG00000029955	SECISBP2	75	51.651	Xenopus_tropicalis
ENSHCOG00000008010	secisbp2	50	61.190	ENSXCOG00000009547	secisbp2	67	61.190	Xiphophorus_couchianus
ENSHCOG00000008010	secisbp2	82	53.796	ENSXMAG00000003090	secisbp2	78	53.312	Xiphophorus_maculatus