EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008205 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 7985 bases
Position: chrKV880382.1:713023-721007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006407	zf-C2H2	PF00096.26	1.1e-14	1	2
ENSHCOP00000006407	zf-C2H2	PF00096.26	1.1e-14	2	2
ENSHCOP00000021398	zf-C2H2	PF00096.26	9.5e-13	1	2
ENSHCOP00000021398	zf-C2H2	PF00096.26	9.5e-13	2	2
ENSHCOP00000021398	zf-met	PF12874.7	1.9e-07	1	1
ENSHCOP00000006407	zf-met	PF12874.7	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003731	-	930	-	ENSHCOP00000006407	309 (aa)	-	-
ENSHCOT00000003745	-	405	-	ENSHCOP00000021398	134 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000008205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008205	-	81	58.140	ENSHCOG00000019385	-	90	49.645
ENSHCOG00000008205	-	75	55.556	ENSHCOG00000019388	-	84	39.789
ENSHCOG00000008205	-	70	52.809	ENSHCOG00000019389	-	62	38.596
ENSHCOG00000008205	-	95	53.846	ENSHCOG00000000947	-	83	53.846
ENSHCOG00000008205	-	83	51.163	ENSHCOG00000019512	-	98	51.163
ENSHCOG00000008205	-	82	54.430	ENSHCOG00000021073	-	88	43.972
ENSHCOG00000008205	-	66	66.667	ENSHCOG00000015355	-	86	66.667
ENSHCOG00000008205	-	81	57.812	ENSHCOG00000017456	-	84	62.500
ENSHCOG00000008205	-	69	55.932	ENSHCOG00000013489	-	88	56.818
ENSHCOG00000008205	-	68	50.000	ENSHCOG00000008181	-	82	36.614
ENSHCOG00000008205	-	76	35.000	ENSHCOG00000001659	znf384l	53	31.902
ENSHCOG00000008205	-	77	59.524	ENSHCOG00000019465	-	64	59.524
ENSHCOG00000008205	-	78	56.818	ENSHCOG00000001256	-	85	47.887
ENSHCOG00000008205	-	78	54.878	ENSHCOG00000001252	-	97	54.878
ENSHCOG00000008205	-	67	56.667	ENSHCOG00000019006	-	66	35.849
ENSHCOG00000008205	-	70	57.143	ENSHCOG00000019001	-	65	57.143
ENSHCOG00000008205	-	81	55.682	ENSHCOG00000007681	-	88	55.682
ENSHCOG00000008205	-	81	61.728	ENSHCOG00000020856	-	97	44.286
ENSHCOG00000008205	-	73	56.098	ENSHCOG00000013455	-	88	57.143
ENSHCOG00000008205	-	69	61.538	ENSHCOG00000014850	-	91	42.366
ENSHCOG00000008205	-	78	56.522	ENSHCOG00000012617	-	98	47.518
ENSHCOG00000008205	-	80	53.409	ENSHCOG00000019438	-	93	47.552
ENSHCOG00000008205	-	78	42.169	ENSHCOG00000019435	SNAI2	71	30.172
ENSHCOG00000008205	-	67	51.190	ENSHCOG00000015237	-	81	36.957
ENSHCOG00000008205	-	83	49.383	ENSHCOG00000015231	-	77	38.776
ENSHCOG00000008205	-	78	57.143	ENSHCOG00000008133	-	82	47.518
ENSHCOG00000008205	-	69	48.529	ENSHCOG00000020670	-	72	50.649
ENSHCOG00000008205	-	97	50.980	ENSHCOG00000018201	-	94	36.806
ENSHCOG00000008205	-	81	59.756	ENSHCOG00000020909	-	77	60.494
ENSHCOG00000008205	-	81	49.333	ENSHCOG00000015459	-	81	49.333
ENSHCOG00000008205	-	77	55.682	ENSHCOG00000019481	-	81	47.518
ENSHCOG00000008205	-	90	56.790	ENSHCOG00000001338	-	92	59.259
ENSHCOG00000008205	-	81	56.790	ENSHCOG00000015484	-	87	51.181
ENSHCOG00000008205	-	71	48.276	ENSHCOG00000015246	-	58	48.276
ENSHCOG00000008205	-	87	48.649	ENSHCOG00000015241	-	85	40.000
ENSHCOG00000008205	-	90	57.778	ENSHCOG00000008168	-	94	57.778
ENSHCOG00000008205	-	78	59.524	ENSHCOG00000015441	-	69	59.524
ENSHCOG00000008205	-	83	46.099	ENSHCOG00000011432	-	91	56.627
ENSHCOG00000008205	-	72	55.556	ENSHCOG00000001345	-	96	46.809
ENSHCOG00000008205	-	77	56.044	ENSHCOG00000008906	-	91	44.056
ENSHCOG00000008205	-	66	55.556	ENSHCOG00000019458	-	73	37.457
ENSHCOG00000008205	-	77	54.321	ENSHCOG00000019454	-	79	33.550
ENSHCOG00000008205	-	81	59.259	ENSHCOG00000020846	-	84	42.000
ENSHCOG00000008205	-	78	56.383	ENSHCOG00000020848	-	83	48.592
ENSHCOG00000008205	-	81	38.851	ENSHCOG00000001870	-	76	38.851
ENSHCOG00000008205	-	69	57.831	ENSHCOG00000001873	-	83	32.827
ENSHCOG00000008205	-	68	54.444	ENSHCOG00000001629	-	88	41.304
ENSHCOG00000008205	-	96	43.529	ENSHCOG00000006286	ZNF319	79	42.683
ENSHCOG00000008205	-	69	58.621	ENSHCOG00000014999	-	70	36.614
ENSHCOG00000008205	-	66	53.012	ENSHCOG00000014994	-	63	33.333
ENSHCOG00000008205	-	71	57.143	ENSHCOG00000014796	-	79	41.129
ENSHCOG00000008205	-	78	61.818	ENSHCOG00000014797	-	77	40.171
ENSHCOG00000008205	-	78	53.409	ENSHCOG00000014792	-	77	35.714
ENSHCOG00000008205	-	78	50.588	ENSHCOG00000008742	-	98	43.796
ENSHCOG00000008205	-	78	58.025	ENSHCOG00000011433	-	93	48.031
ENSHCOG00000008205	-	69	56.471	ENSHCOG00000008234	-	86	46.099
ENSHCOG00000008205	-	78	44.000	ENSHCOG00000000511	-	75	37.324
ENSHCOG00000008205	-	81	56.818	ENSHCOG00000000517	-	90	44.604
ENSHCOG00000008205	-	76	56.338	ENSHCOG00000009103	-	53	56.338
ENSHCOG00000008205	-	78	56.977	ENSHCOG00000001638	-	95	48.551
ENSHCOG00000008205	-	94	38.947	ENSHCOG00000001631	-	75	36.308
ENSHCOG00000008205	-	77	55.952	ENSHCOG00000020940	-	82	48.227
ENSHCOG00000008205	-	82	61.538	ENSHCOG00000015497	-	74	61.538
ENSHCOG00000008205	-	84	54.321	ENSHCOG00000012592	-	73	45.082
ENSHCOG00000008205	-	77	41.667	ENSHCOG00000013713	gfi1b	50	41.667
ENSHCOG00000008205	-	68	60.000	ENSHCOG00000000627	-	84	33.754
ENSHCOG00000008205	-	80	55.000	ENSHCOG00000008227	-	80	30.484
ENSHCOG00000008205	-	66	49.412	ENSHCOG00000008601	-	81	50.549
ENSHCOG00000008205	-	77	59.259	ENSHCOG00000020725	-	86	47.887
ENSHCOG00000008205	-	68	60.494	ENSHCOG00000000138	-	84	39.506
ENSHCOG00000008205	-	66	52.273	ENSHCOG00000007464	-	73	37.349
ENSHCOG00000008205	-	80	48.000	ENSHCOG00000004879	znf341	50	33.577
ENSHCOG00000008205	-	92	35.537	ENSHCOG00000020556	-	59	35.537
ENSHCOG00000008205	-	74	58.333	ENSHCOG00000001883	-	82	58.333
ENSHCOG00000008205	-	71	53.684	ENSHCOG00000014986	-	88	43.827
ENSHCOG00000008205	-	69	58.025	ENSHCOG00000015010	-	89	39.161
ENSHCOG00000008205	-	75	52.273	ENSHCOG00000020924	-	79	38.462
ENSHCOG00000008205	-	70	54.286	ENSHCOG00000014786	-	95	54.286
ENSHCOG00000008205	-	69	55.056	ENSHCOG00000014781	-	95	40.833
ENSHCOG00000008205	-	98	55.682	ENSHCOG00000001942	-	97	52.941
ENSHCOG00000008205	-	78	57.377	ENSHCOG00000012662	-	96	47.183
ENSHCOG00000008205	-	83	45.714	ENSHCOG00000001448	-	72	44.156
ENSHCOG00000008205	-	67	46.032	ENSHCOG00000019555	GFI1	81	37.410
ENSHCOG00000008205	-	69	54.321	ENSHCOG00000019541	-	85	40.288
ENSHCOG00000008205	-	76	60.494	ENSHCOG00000021028	-	87	60.494
ENSHCOG00000008205	-	70	48.276	ENSHCOG00000015639	znf319b	82	43.902
ENSHCOG00000008205	-	78	56.790	ENSHCOG00000015386	-	91	46.809
ENSHCOG00000008205	-	87	55.682	ENSHCOG00000003021	-	58	49.242
ENSHCOG00000008205	-	79	45.000	ENSHCOG00000012131	prdm5	58	37.956
ENSHCOG00000008205	-	95	57.647	ENSHCOG00000008028	-	86	57.647
ENSHCOG00000008205	-	76	50.820	ENSHCOG00000014855	-	73	41.754
ENSHCOG00000008205	-	78	56.250	ENSHCOG00000020984	-	95	50.725
ENSHCOG00000008205	-	74	47.059	ENSHCOG00000010212	-	50	40.179
ENSHCOG00000008205	-	77	56.790	ENSHCOG00000001423	-	67	35.273
ENSHCOG00000008205	-	81	44.186	ENSHCOG00000003909	-	73	34.902
ENSHCOG00000008205	-	81	52.459	ENSHCOG00000014881	-	84	46.617
ENSHCOG00000008205	-	84	48.529	ENSHCOG00000014887	-	71	48.529
ENSHCOG00000008205	-	82	50.000	ENSHCOG00000018977	-	86	51.685
ENSHCOG00000008205	-	75	43.210	ENSHCOG00000000800	-	79	37.143
ENSHCOG00000008205	-	75	56.627	ENSHCOG00000001272	-	95	54.321
ENSHCOG00000008205	-	81	51.786	ENSHCOG00000015000	-	83	51.786
ENSHCOG00000008205	-	66	60.656	ENSHCOG00000015003	-	73	32.016
ENSHCOG00000008205	-	68	55.952	ENSHCOG00000015005	-	76	39.506
ENSHCOG00000008205	-	86	57.143	ENSHCOG00000007664	-	95	61.728
ENSHCOG00000008205	-	80	57.955	ENSHCOG00000020879	-	84	42.593
ENSHCOG00000008205	-	69	57.778	ENSHCOG00000014777	-	92	48.227
ENSHCOG00000008205	-	81	53.226	ENSHCOG00000003041	-	92	53.226
ENSHCOG00000008205	-	78	61.364	ENSHCOG00000015425	-	91	48.936
ENSHCOG00000008205	-	80	56.818	ENSHCOG00000015476	-	91	56.818
ENSHCOG00000008205	-	63	56.250	ENSHCOG00000014874	-	87	31.970
ENSHCOG00000008205	-	84	44.681	ENSHCOG00000003085	-	93	44.681
ENSHCOG00000008205	-	78	57.746	ENSHCOG00000011411	-	99	46.154
ENSHCOG00000008205	-	66	58.333	ENSHCOG00000008213	-	68	38.047
ENSHCOG00000008205	-	80	47.619	ENSHCOG00000010332	-	80	39.326
ENSHCOG00000008205	-	72	40.506	ENSHCOG00000016179	-	55	36.264
ENSHCOG00000008205	-	93	51.429	ENSHCOG00000021033	-	91	51.429
ENSHCOG00000008205	-	90	57.778	ENSHCOG00000007485	-	93	57.778
ENSHCOG00000008205	-	67	60.494	ENSHCOG00000001793	-	99	43.448
ENSHCOG00000008205	-	71	41.053	ENSHCOG00000007100	zgc:171929	67	41.053
ENSHCOG00000008205	-	89	54.545	ENSHCOG00000001318	-	94	56.818
ENSHCOG00000008205	-	70	41.667	ENSHCOG00000001313	-	50	37.857
ENSHCOG00000008205	-	90	58.025	ENSHCOG00000015105	-	93	58.025
ENSHCOG00000008205	-	68	57.692	ENSHCOG00000017437	-	86	39.735
ENSHCOG00000008205	-	77	51.020	ENSHCOG00000001292	-	86	37.681
ENSHCOG00000008205	-	78	41.667	ENSHCOG00000014891	-	73	33.333
ENSHCOG00000008205	-	69	57.831	ENSHCOG00000008550	-	83	32.827
ENSHCOG00000008205	-	80	51.648	ENSHCOG00000012175	-	97	45.946
ENSHCOG00000008205	-	85	46.809	ENSHCOG00000007990	-	85	46.809
ENSHCOG00000008205	-	78	48.864	ENSHCOG00000001245	-	89	43.796
ENSHCOG00000008205	-	74	54.545	ENSHCOG00000001242	-	84	38.889
ENSHCOG00000008205	-	77	53.409	ENSHCOG00000009009	-	94	36.742
ENSHCOG00000008205	-	67	56.667	ENSHCOG00000007358	-	70	56.667
ENSHCOG00000008205	-	85	47.273	ENSHCOG00000007351	-	94	47.273
ENSHCOG00000008205	-	78	51.190	ENSHCOG00000015414	-	63	51.190
ENSHCOG00000008205	-	74	59.259	ENSHCOG00000020993	-	84	49.645
ENSHCOG00000008205	-	66	54.321	ENSHCOG00000002969	-	63	35.472
ENSHCOG00000008205	-	72	51.316	ENSHCOG00000010282	znf236	50	39.831
ENSHCOG00000008205	-	66	54.545	ENSHCOG00000001238	-	92	54.545
ENSHCOG00000008205	-	74	55.738	ENSHCOG00000014713	-	95	55.738
ENSHCOG00000008205	-	77	56.818	ENSHCOG00000020972	-	93	56.818
ENSHCOG00000008205	-	68	55.556	ENSHCOG00000020976	-	69	36.466
ENSHCOG00000008205	-	78	57.831	ENSHCOG00000015463	-	58	57.831
ENSHCOG00000008205	-	80	56.410	ENSHCOG00000019497	-	90	48.936
ENSHCOG00000008205	-	69	56.044	ENSHCOG00000001300	-	95	59.524
ENSHCOG00000008205	-	77	58.333	ENSHCOG00000001308	-	84	47.887
ENSHCOG00000008205	-	72	40.506	ENSHCOG00000016704	scrt1b	53	32.479
ENSHCOG00000008205	-	90	39.241	ENSHCOG00000018972	znf710b	62	41.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008205	-	73	46.429	ENSAPOG00000021496	-	56	43.511	Acanthochromis_polyacanthus
ENSHCOG00000008205	-	67	48.148	ENSAPOG00000000128	-	90	48.387	Acanthochromis_polyacanthus
ENSHCOG00000008205	-	66	40.506	ENSACIG00000016133	-	53	40.506	Amphilophus_citrinellus
ENSHCOG00000008205	-	73	46.875	ENSAOCG00000000463	-	57	41.732	Amphiprion_ocellaris
ENSHCOG00000008205	-	73	46.429	ENSAPEG00000010478	-	50	46.429	Amphiprion_percula
ENSHCOG00000008205	-	84	43.363	ENSAPEG00000011635	-	92	43.662	Amphiprion_percula
ENSHCOG00000008205	-	70	46.154	ENSATEG00000015828	-	64	46.154	Anabas_testudineus
ENSHCOG00000008205	-	63	46.429	ENSATEG00000024551	-	53	46.429	Anabas_testudineus
ENSHCOG00000008205	-	69	56.667	ENSATEG00000011202	-	62	43.200	Anabas_testudineus
ENSHCOG00000008205	-	71	38.554	ENSATEG00000022022	-	90	47.273	Anabas_testudineus
ENSHCOG00000008205	-	74	51.807	ENSATEG00000011235	-	70	41.569	Anabas_testudineus
ENSHCOG00000008205	-	66	45.679	ENSATEG00000024549	-	71	37.762	Anabas_testudineus
ENSHCOG00000008205	-	78	49.425	ENSCVAG00000003630	-	95	42.568	Cyprinodon_variegatus
ENSHCOG00000008205	-	71	47.619	ENSCVAG00000004508	-	83	38.806	Cyprinodon_variegatus
ENSHCOG00000008205	-	72	51.111	ENSELUG00000008171	-	83	41.304	Esox_lucius
ENSHCOG00000008205	-	82	30.272	ENSFHEG00000020050	-	90	30.272	Fundulus_heteroclitus
ENSHCOG00000008205	-	68	53.659	ENSHBUG00000002878	-	85	39.167	Haplochromis_burtoni
ENSHCOG00000008205	-	71	39.796	ENSHBUG00000000731	-	52	36.296	Haplochromis_burtoni
ENSHCOG00000008205	-	84	37.500	ENSIPUG00000009577	-	51	37.500	Ictalurus_punctatus
ENSHCOG00000008205	-	79	36.885	ENSKMAG00000000520	-	93	36.885	Kryptolebias_marmoratus
ENSHCOG00000008205	-	77	38.525	ENSKMAG00000019912	-	92	38.525	Kryptolebias_marmoratus
ENSHCOG00000008205	-	80	37.607	ENSLBEG00000011006	-	79	37.607	Labrus_bergylta
ENSHCOG00000008205	-	67	57.831	ENSMAMG00000022152	-	80	39.298	Mastacembelus_armatus
ENSHCOG00000008205	-	71	39.796	ENSMZEG00005004047	-	52	42.000	Maylandia_zebra
ENSHCOG00000008205	-	67	55.556	ENSMZEG00005008312	-	63	31.313	Maylandia_zebra
ENSHCOG00000008205	-	66	48.780	ENSMALG00000014761	-	61	48.780	Monopterus_albus
ENSHCOG00000008205	-	84	41.322	ENSNBRG00000024051	-	78	41.322	Neolamprologus_brichardi
ENSHCOG00000008205	-	77	46.914	ENSNBRG00000004381	-	76	46.914	Neolamprologus_brichardi
ENSHCOG00000008205	-	81	50.000	ENSNBRG00000013838	-	77	50.000	Neolamprologus_brichardi
ENSHCOG00000008205	-	78	48.235	ENSORLG00000025719	-	95	39.855	Oryzias_latipes
ENSHCOG00000008205	-	68	53.704	ENSORLG00020009554	-	74	53.704	Oryzias_latipes_hni
ENSHCOG00000008205	-	63	44.444	ENSORLG00020005815	-	73	44.444	Oryzias_latipes_hni
ENSHCOG00000008205	-	78	48.235	ENSORLG00015012599	-	87	39.855	Oryzias_latipes_hsok
ENSHCOG00000008205	-	73	45.946	ENSOMEG00000015640	-	70	45.946	Oryzias_melastigma
ENSHCOG00000008205	-	78	49.296	ENSOMEG00000010906	-	65	37.273	Oryzias_melastigma
ENSHCOG00000008205	-	83	37.931	ENSPFOG00000012948	-	77	37.931	Poecilia_formosa
ENSHCOG00000008205	-	88	46.296	ENSPLAG00000009651	-	92	50.000	Poecilia_latipinna
ENSHCOG00000008205	-	69	45.882	ENSPMEG00000023113	-	96	36.242	Poecilia_mexicana
ENSHCOG00000008205	-	78	53.571	ENSPREG00000000853	-	52	53.571	Poecilia_reticulata
ENSHCOG00000008205	-	89	50.847	ENSPREG00000016270	-	92	44.444	Poecilia_reticulata
ENSHCOG00000008205	-	71	45.679	ENSPREG00000004006	-	53	45.679	Poecilia_reticulata
ENSHCOG00000008205	-	84	40.650	ENSPNYG00000019187	-	97	41.322	Pundamilia_nyererei
ENSHCOG00000008205	-	68	53.086	ENSPNYG00000023882	-	96	39.496	Pundamilia_nyererei
ENSHCOG00000008205	-	88	47.525	ENSPNAG00000010317	-	87	47.525	Pygocentrus_nattereri
ENSHCOG00000008205	-	90	47.959	ENSSLDG00000007568	-	89	47.959	Seriola_lalandi_dorsalis
ENSHCOG00000008205	-	73	46.429	ENSSPAG00000010524	-	71	42.748	Stegastes_partitus
ENSHCOG00000008205	-	84	45.902	ENSSPAG00000021950	-	93	45.902	Stegastes_partitus
ENSHCOG00000008205	-	83	46.377	ENSSPAG00000021940	-	63	46.377	Stegastes_partitus
ENSHCOG00000008205	-	81	35.897	ENSSPAG00000017093	-	50	35.897	Stegastes_partitus
ENSHCOG00000008205	-	83	54.118	ENSXETG00000002690	-	62	54.118	Xenopus_tropicalis
ENSHCOG00000008205	-	67	48.750	ENSXCOG00000018315	-	79	48.750	Xiphophorus_couchianus