EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2168 bases
Position: chrKV880382.1:705037-707204
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006437	zf-C2H2	PF00096.26	1.6e-17	1	3
ENSHCOP00000006437	zf-C2H2	PF00096.26	1.6e-17	2	3
ENSHCOP00000006437	zf-C2H2	PF00096.26	1.6e-17	3	3
ENSHCOP00000006437	zf-met	PF12874.7	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003690	-	1742	-	ENSHCOP00000006437	423 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000008227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008227	-	56	32.099	ENSHCOG00000003041	-	99	32.099
ENSHCOG00000008227	-	87	41.667	ENSHCOG00000015463	-	98	41.667
ENSHCOG00000008227	-	87	37.379	ENSHCOG00000001245	-	98	37.379
ENSHCOG00000008227	-	93	37.000	ENSHCOG00000001242	-	98	40.500
ENSHCOG00000008227	-	80	30.484	ENSHCOG00000008205	-	80	55.000
ENSHCOG00000008227	-	78	41.395	ENSHCOG00000011432	-	96	39.316
ENSHCOG00000008227	-	57	41.500	ENSHCOG00000011433	-	90	41.500
ENSHCOG00000008227	-	55	52.459	ENSHCOG00000015355	-	98	48.837
ENSHCOG00000008227	-	95	43.000	ENSHCOG00000007664	-	99	43.284
ENSHCOG00000008227	-	81	32.849	ENSHCOG00000020924	-	96	30.245
ENSHCOG00000008227	-	93	41.667	ENSHCOG00000014994	-	84	41.667
ENSHCOG00000008227	-	92	43.299	ENSHCOG00000014999	-	97	43.299
ENSHCOG00000008227	-	90	38.614	ENSHCOG00000012592	-	95	38.614
ENSHCOG00000008227	-	61	33.333	ENSHCOG00000006286	ZNF319	90	33.333
ENSHCOG00000008227	-	90	43.000	ENSHCOG00000021033	-	99	43.000
ENSHCOG00000008227	-	86	42.391	ENSHCOG00000001308	-	97	42.391
ENSHCOG00000008227	-	50	38.182	ENSHCOG00000008686	-	87	34.568
ENSHCOG00000008227	-	66	33.010	ENSHCOG00000000365	PRDM15	52	33.010
ENSHCOG00000008227	-	73	30.693	ENSHCOG00000015237	-	52	31.441
ENSHCOG00000008227	-	56	37.500	ENSHCOG00000015231	-	67	37.500
ENSHCOG00000008227	-	76	39.759	ENSHCOG00000015438	-	65	39.759
ENSHCOG00000008227	-	94	40.580	ENSHCOG00000001870	-	99	40.580
ENSHCOG00000008227	-	87	32.658	ENSHCOG00000001873	-	93	39.865
ENSHCOG00000008227	-	60	40.299	ENSHCOG00000019512	-	90	42.500
ENSHCOG00000008227	-	77	46.465	ENSHCOG00000015459	-	77	46.465
ENSHCOG00000008227	-	94	38.318	ENSHCOG00000019389	-	99	38.318
ENSHCOG00000008227	-	87	39.560	ENSHCOG00000001256	-	100	43.500
ENSHCOG00000008227	-	55	44.578	ENSHCOG00000001252	-	97	41.000
ENSHCOG00000008227	-	55	44.643	ENSHCOG00000017456	-	86	40.500
ENSHCOG00000008227	-	64	39.370	ENSHCOG00000019465	-	96	41.667
ENSHCOG00000008227	-	64	41.500	ENSHCOG00000020984	-	83	41.500
ENSHCOG00000008227	-	55	43.103	ENSHCOG00000019385	-	92	43.103
ENSHCOG00000008227	-	96	33.708	ENSHCOG00000015241	-	92	33.708
ENSHCOG00000008227	-	87	32.658	ENSHCOG00000008550	-	93	39.865
ENSHCOG00000008227	-	52	42.500	ENSHCOG00000014986	-	85	42.500
ENSHCOG00000008227	-	71	47.170	ENSHCOG00000003909	-	79	47.170
ENSHCOG00000008227	-	52	31.250	ENSHCOG00000019435	SNAI2	65	31.325
ENSHCOG00000008227	-	73	44.048	ENSHCOG00000019438	-	81	44.048
ENSHCOG00000008227	-	87	33.333	ENSHCOG00000001629	-	99	36.500
ENSHCOG00000008227	-	94	43.750	ENSHCOG00000019006	-	98	43.750
ENSHCOG00000008227	-	73	43.590	ENSHCOG00000018977	-	89	43.590
ENSHCOG00000008227	-	54	32.524	ENSHCOG00000018972	znf710b	50	32.524
ENSHCOG00000008227	-	86	41.899	ENSHCOG00000020993	-	98	41.899
ENSHCOG00000008227	-	94	45.933	ENSHCOG00000008133	-	97	43.387
ENSHCOG00000008227	-	65	41.860	ENSHCOG00000002969	-	66	41.860
ENSHCOG00000008227	-	80	40.807	ENSHCOG00000001338	-	98	40.807
ENSHCOG00000008227	-	55	42.574	ENSHCOG00000007351	-	84	42.574
ENSHCOG00000008227	-	52	40.394	ENSHCOG00000007358	-	87	40.394
ENSHCOG00000008227	-	54	31.336	ENSHCOG00000017437	-	89	33.232
ENSHCOG00000008227	-	91	36.932	ENSHCOG00000015005	-	86	38.500
ENSHCOG00000008227	-	87	36.250	ENSHCOG00000019541	-	98	35.109
ENSHCOG00000008227	-	86	49.383	ENSHCOG00000014796	-	95	49.383
ENSHCOG00000008227	-	92	40.984	ENSHCOG00000014797	-	97	40.984
ENSHCOG00000008227	-	67	30.872	ENSHCOG00000014792	-	80	32.766
ENSHCOG00000008227	-	78	41.270	ENSHCOG00000010332	-	63	48.837
ENSHCOG00000008227	-	65	39.375	ENSHCOG00000019481	-	84	39.375
ENSHCOG00000008227	-	55	41.500	ENSHCOG00000001883	-	87	41.500
ENSHCOG00000008227	-	52	32.955	ENSHCOG00000002898	-	57	32.955
ENSHCOG00000008227	-	87	37.156	ENSHCOG00000021073	-	98	38.614
ENSHCOG00000008227	-	94	45.098	ENSHCOG00000020309	-	99	45.098
ENSHCOG00000008227	-	57	33.333	ENSHCOG00000018201	-	86	37.419
ENSHCOG00000008227	-	74	37.705	ENSHCOG00000008168	-	95	43.434
ENSHCOG00000008227	-	64	41.935	ENSHCOG00000015441	-	79	42.000
ENSHCOG00000008227	-	64	39.901	ENSHCOG00000001345	-	95	40.887
ENSHCOG00000008227	-	75	45.000	ENSHCOG00000012617	-	95	45.000
ENSHCOG00000008227	-	87	38.462	ENSHCOG00000019454	-	99	38.462
ENSHCOG00000008227	-	94	42.735	ENSHCOG00000019458	-	98	42.735
ENSHCOG00000008227	-	96	32.911	ENSHCOG00000014887	-	81	32.911
ENSHCOG00000008227	-	51	43.137	ENSHCOG00000015246	-	60	35.426
ENSHCOG00000008227	-	52	41.758	ENSHCOG00000015497	-	72	41.758
ENSHCOG00000008227	-	64	41.026	ENSHCOG00000007990	-	93	41.026
ENSHCOG00000008227	-	78	39.496	ENSHCOG00000014874	-	95	39.496
ENSHCOG00000008227	-	57	39.899	ENSHCOG00000007681	-	84	42.857
ENSHCOG00000008227	-	96	40.789	ENSHCOG00000008234	-	99	41.575
ENSHCOG00000008227	-	83	41.848	ENSHCOG00000001638	-	99	43.000
ENSHCOG00000008227	-	86	34.444	ENSHCOG00000015010	-	99	37.853
ENSHCOG00000008227	-	99	41.667	ENSHCOG00000014881	-	95	40.340
ENSHCOG00000008227	-	50	36.364	ENSHCOG00000000800	-	80	36.364
ENSHCOG00000008227	-	51	40.299	ENSHCOG00000020972	-	95	42.857
ENSHCOG00000008227	-	94	40.171	ENSHCOG00000020976	-	100	40.171
ENSHCOG00000008227	-	74	32.907	ENSHCOG00000000627	-	55	38.605
ENSHCOG00000008227	-	50	32.367	ENSHCOG00000000511	-	70	36.986
ENSHCOG00000008227	-	68	39.175	ENSHCOG00000000517	-	60	39.175
ENSHCOG00000008227	-	64	37.569	ENSHCOG00000008742	-	97	37.569
ENSHCOG00000008227	-	88	48.438	ENSHCOG00000000138	-	98	38.000
ENSHCOG00000008227	-	92	43.299	ENSHCOG00000009103	-	100	54.717
ENSHCOG00000008227	-	83	40.909	ENSHCOG00000010282	znf236	69	40.909
ENSHCOG00000008227	-	60	36.929	ENSHCOG00000012662	-	93	40.000
ENSHCOG00000008227	-	80	34.853	ENSHCOG00000014891	-	99	34.048
ENSHCOG00000008227	-	87	37.374	ENSHCOG00000015484	-	99	41.139
ENSHCOG00000008227	-	53	44.706	ENSHCOG00000017736	znf652	51	44.706
ENSHCOG00000008227	-	54	37.129	ENSHCOG00000015386	-	89	38.974
ENSHCOG00000008227	-	60	39.216	ENSHCOG00000020856	-	84	38.806
ENSHCOG00000008227	-	50	36.264	ENSHCOG00000015639	znf319b	90	36.264
ENSHCOG00000008227	-	88	35.526	ENSHCOG00000020725	-	98	38.614
ENSHCOG00000008227	-	77	36.364	ENSHCOG00000007464	-	76	36.667
ENSHCOG00000008227	-	68	32.653	ENSHCOG00000001318	-	99	40.299
ENSHCOG00000008227	-	63	31.606	ENSHCOG00000012131	prdm5	77	34.653
ENSHCOG00000008227	-	51	49.275	ENSHCOG00000008601	-	78	49.275
ENSHCOG00000008227	-	83	37.949	ENSHCOG00000013489	-	98	44.500
ENSHCOG00000008227	-	86	40.351	ENSHCOG00000015000	-	98	40.351
ENSHCOG00000008227	-	92	41.758	ENSHCOG00000015003	-	99	41.758
ENSHCOG00000008227	-	87	40.000	ENSHCOG00000001448	-	94	42.000
ENSHCOG00000008227	-	79	40.000	ENSHCOG00000013455	-	92	44.304
ENSHCOG00000008227	-	59	40.426	ENSHCOG00000008028	-	85	40.426
ENSHCOG00000008227	-	50	31.818	ENSHCOG00000001901	si:dkey-89b17.4	58	42.308
ENSHCOG00000008227	-	88	38.326	ENSHCOG00000020940	-	98	41.000
ENSHCOG00000008227	-	68	40.541	ENSHCOG00000007485	-	92	43.434
ENSHCOG00000008227	-	55	38.333	ENSHCOG00000014777	-	93	38.333
ENSHCOG00000008227	-	51	40.183	ENSHCOG00000015425	-	88	41.294
ENSHCOG00000008227	-	74	40.230	ENSHCOG00000003085	-	92	40.230
ENSHCOG00000008227	-	88	32.924	ENSHCOG00000001423	-	98	33.416
ENSHCOG00000008227	-	90	43.602	ENSHCOG00000020848	-	99	43.396
ENSHCOG00000008227	-	84	34.722	ENSHCOG00000020846	-	94	37.037
ENSHCOG00000008227	-	94	39.506	ENSHCOG00000001942	-	100	39.506
ENSHCOG00000008227	-	64	39.303	ENSHCOG00000015105	-	93	40.102
ENSHCOG00000008227	-	94	42.708	ENSHCOG00000014855	-	98	42.708
ENSHCOG00000008227	-	73	41.758	ENSHCOG00000014850	-	93	41.758
ENSHCOG00000008227	-	78	32.558	ENSHCOG00000019388	-	71	30.994
ENSHCOG00000008227	-	93	46.296	ENSHCOG00000001272	-	99	46.296
ENSHCOG00000008227	-	98	44.651	ENSHCOG00000008213	-	98	44.651
ENSHCOG00000008227	-	63	36.466	ENSHCOG00000008906	-	82	38.636
ENSHCOG00000008227	-	75	37.811	ENSHCOG00000014713	-	98	38.710
ENSHCOG00000008227	-	87	39.506	ENSHCOG00000001631	-	99	38.065
ENSHCOG00000008227	-	92	39.171	ENSHCOG00000000947	-	99	39.837
ENSHCOG00000008227	-	87	34.028	ENSHCOG00000015414	-	94	38.614
ENSHCOG00000008227	-	93	42.667	ENSHCOG00000001292	-	97	42.667
ENSHCOG00000008227	-	95	38.326	ENSHCOG00000008181	-	99	41.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008227	-	80	46.753	ENSAPOG00000018429	-	75	46.753	Acanthochromis_polyacanthus
ENSHCOG00000008227	-	51	31.250	ENSAPOG00000008319	-	64	30.726	Acanthochromis_polyacanthus
ENSHCOG00000008227	-	80	41.176	ENSAPOG00000019138	-	85	41.584	Acanthochromis_polyacanthus
ENSHCOG00000008227	-	78	52.459	ENSACIG00000007464	-	88	52.459	Amphilophus_citrinellus
ENSHCOG00000008227	-	71	41.538	ENSACIG00000006826	-	65	41.538	Amphilophus_citrinellus
ENSHCOG00000008227	-	94	44.231	ENSACIG00000004641	-	98	44.898	Amphilophus_citrinellus
ENSHCOG00000008227	-	51	31.818	ENSAOCG00000015944	-	58	31.818	Amphiprion_ocellaris
ENSHCOG00000008227	-	54	38.095	ENSAOCG00000001325	-	81	38.095	Amphiprion_ocellaris
ENSHCOG00000008227	-	51	31.818	ENSAOCG00000014769	-	64	31.818	Amphiprion_ocellaris
ENSHCOG00000008227	-	80	41.176	ENSAOCG00000016897	-	90	41.176	Amphiprion_ocellaris
ENSHCOG00000008227	-	80	38.636	ENSAPEG00000001556	-	90	38.636	Amphiprion_percula
ENSHCOG00000008227	-	65	35.165	ENSATEG00000018931	-	86	35.165	Anabas_testudineus
ENSHCOG00000008227	-	64	35.294	ENSAMXG00000029518	-	59	35.294	Astyanax_mexicanus
ENSHCOG00000008227	-	69	46.000	ENSCSEG00000008525	-	56	46.000	Cynoglossus_semilaevis
ENSHCOG00000008227	-	94	37.113	ENSCVAG00000006484	-	96	37.113	Cyprinodon_variegatus
ENSHCOG00000008227	-	50	38.554	ENSCVAG00000015616	-	87	38.554	Cyprinodon_variegatus
ENSHCOG00000008227	-	55	42.308	ENSCVAG00000012682	-	77	42.308	Cyprinodon_variegatus
ENSHCOG00000008227	-	53	33.721	ENSCVAG00000003250	-	68	33.721	Cyprinodon_variegatus
ENSHCOG00000008227	-	59	38.372	ENSCVAG00000006653	-	73	38.372	Cyprinodon_variegatus
ENSHCOG00000008227	-	50	35.407	ENSEBUG00000002290	-	50	41.026	Eptatretus_burgeri
ENSHCOG00000008227	-	94	41.667	ENSELUG00000012088	-	99	41.667	Esox_lucius
ENSHCOG00000008227	-	52	33.846	ENSELUG00000001909	-	82	30.244	Esox_lucius
ENSHCOG00000008227	-	54	35.593	ENSELUG00000024007	-	78	35.593	Esox_lucius
ENSHCOG00000008227	-	87	48.387	ENSGAFG00000008204	-	95	48.387	Gambusia_affinis
ENSHCOG00000008227	-	51	38.144	ENSGAFG00000001879	-	66	38.144	Gambusia_affinis
ENSHCOG00000008227	-	92	48.750	ENSGAFG00000011998	-	95	48.750	Gambusia_affinis
ENSHCOG00000008227	-	88	31.383	ENSGAFG00000012545	-	77	31.383	Gambusia_affinis
ENSHCOG00000008227	-	94	37.288	ENSKMAG00000021873	-	99	37.288	Kryptolebias_marmoratus
ENSHCOG00000008227	-	57	35.859	ENSLBEG00000001132	-	82	35.859	Labrus_bergylta
ENSHCOG00000008227	-	73	36.111	ENSLBEG00000006161	-	93	36.111	Labrus_bergylta
ENSHCOG00000008227	-	89	41.176	ENSLBEG00000011210	-	85	41.176	Labrus_bergylta
ENSHCOG00000008227	-	58	31.746	ENSLOCG00000004208	-	99	31.746	Lepisosteus_oculatus
ENSHCOG00000008227	-	63	32.323	ENSMAMG00000017939	-	91	32.323	Mastacembelus_armatus
ENSHCOG00000008227	-	50	33.824	ENSMZEG00005013907	-	77	33.824	Maylandia_zebra
ENSHCOG00000008227	-	99	37.535	ENSMMOG00000017592	-	96	37.571	Mola_mola
ENSHCOG00000008227	-	57	32.917	ENSMALG00000004279	-	87	33.553	Monopterus_albus
ENSHCOG00000008227	-	80	42.169	ENSNBRG00000006112	-	69	42.169	Neolamprologus_brichardi
ENSHCOG00000008227	-	58	32.512	ENSORLG00000002268	-	92	32.512	Oryzias_latipes
ENSHCOG00000008227	-	94	39.583	ENSORLG00020019227	-	63	39.744	Oryzias_latipes_hni
ENSHCOG00000008227	-	55	30.120	ENSORLG00020018921	-	77	30.120	Oryzias_latipes_hni
ENSHCOG00000008227	-	88	36.598	ENSOMEG00000019114	-	58	46.377	Oryzias_melastigma
ENSHCOG00000008227	-	57	33.784	ENSOMEG00000005578	-	83	33.784	Oryzias_melastigma
ENSHCOG00000008227	-	94	45.349	ENSPKIG00000005164	-	99	46.429	Paramormyrops_kingsleyae
ENSHCOG00000008227	-	52	39.130	ENSPMGG00000007051	-	63	36.145	Periophthalmus_magnuspinnatus
ENSHCOG00000008227	-	71	34.842	ENSPMGG00000009571	-	78	35.294	Periophthalmus_magnuspinnatus
ENSHCOG00000008227	-	52	32.979	ENSPMGG00000006928	-	51	32.979	Periophthalmus_magnuspinnatus
ENSHCOG00000008227	-	52	34.483	ENSPFOG00000018860	-	99	34.483	Poecilia_formosa
ENSHCOG00000008227	-	94	37.209	ENSPFOG00000009491	-	99	37.209	Poecilia_formosa
ENSHCOG00000008227	-	50	35.811	ENSPLAG00000008941	-	83	35.811	Poecilia_latipinna
ENSHCOG00000008227	-	51	42.353	ENSPLAG00000010067	-	67	42.353	Poecilia_latipinna
ENSHCOG00000008227	-	94	37.209	ENSPMEG00000024117	-	99	37.209	Poecilia_mexicana
ENSHCOG00000008227	-	50	37.662	ENSPMEG00000002953	-	57	37.662	Poecilia_mexicana
ENSHCOG00000008227	-	77	35.593	ENSPREG00000008907	-	79	35.593	Poecilia_reticulata
ENSHCOG00000008227	-	54	37.755	ENSPNYG00000017888	-	63	37.975	Pundamilia_nyererei
ENSHCOG00000008227	-	53	37.647	ENSPNAG00000005946	-	88	30.049	Pygocentrus_nattereri
ENSHCOG00000008227	-	59	44.737	ENSSMAG00000004259	-	75	44.737	Scophthalmus_maximus
ENSHCOG00000008227	-	52	36.181	ENSSMAG00000013291	-	92	40.000	Scophthalmus_maximus
ENSHCOG00000008227	-	81	39.773	ENSSDUG00000020774	-	91	39.773	Seriola_dumerili
ENSHCOG00000008227	-	83	34.146	ENSSDUG00000000905	-	94	34.146	Seriola_dumerili
ENSHCOG00000008227	-	53	30.348	ENSSLDG00000014436	-	94	30.348	Seriola_lalandi_dorsalis
ENSHCOG00000008227	-	77	40.698	ENSSPAG00000005770	-	75	40.698	Stegastes_partitus
ENSHCOG00000008227	-	51	32.653	ENSXETG00000012506	znf91	99	31.818	Xenopus_tropicalis
ENSHCOG00000008227	-	50	40.659	ENSXCOG00000020768	-	75	40.659	Xiphophorus_couchianus
ENSHCOG00000008227	-	73	41.837	ENSXCOG00000003441	-	86	41.837	Xiphophorus_couchianus
ENSHCOG00000008227	-	50	31.250	ENSXMAG00000022657	-	58	30.270	Xiphophorus_maculatus