EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000008422 (Gene tree)
Gene ID: 109519092
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8156 bases
Position: chrKV880061.1:2702314-2710469
Accession: 109519092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021528	R3H	PF01424.22	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003393	-	1310	XM_019875413	ENSHCOP00000021528	257 (aa)	XP_019730972	UPI00094F2483

Gene Model

Click here to download ENSHCOG00000008422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008422	r3hdm4	91	55.745	ENSG00000198858	R3HDM4	89	57.466	Homo_sapiens
ENSHCOG00000008422	r3hdm4	91	54.237	ENSAMEG00000003001	R3HDM4	97	54.237	Ailuropoda_melanoleuca
ENSHCOG00000008422	r3hdm4	99	82.353	ENSACIG00000004672	r3hdm4	99	82.353	Amphilophus_citrinellus
ENSHCOG00000008422	r3hdm4	98	82.213	ENSATEG00000015913	r3hdm4	99	82.213	Anabas_testudineus
ENSHCOG00000008422	r3hdm4	91	55.696	ENSANAG00000029748	R3HDM4	97	55.696	Aotus_nancymaae
ENSHCOG00000008422	r3hdm4	91	55.508	ENSBTAG00000046406	R3HDM4	88	55.508	Bos_taurus
ENSHCOG00000008422	r3hdm4	91	55.274	ENSCJAG00000020114	R3HDM4	92	54.251	Callithrix_jacchus
ENSHCOG00000008422	r3hdm4	91	55.085	ENSCAFG00000019665	R3HDM4	87	55.085	Canis_familiaris
ENSHCOG00000008422	r3hdm4	91	55.508	ENSCAFG00020016880	R3HDM4	87	55.508	Canis_lupus_dingo
ENSHCOG00000008422	r3hdm4	91	55.085	ENSCHIG00000020110	R3HDM4	91	55.085	Capra_hircus
ENSHCOG00000008422	r3hdm4	91	55.274	ENSCCAG00000019955	R3HDM4	86	55.274	Cebus_capucinus
ENSHCOG00000008422	r3hdm4	91	54.852	ENSCATG00000037269	R3HDM4	88	54.852	Cercocebus_atys
ENSHCOG00000008422	r3hdm4	91	55.319	ENSCLAG00000007094	R3HDM4	96	55.319	Chinchilla_lanigera
ENSHCOG00000008422	r3hdm4	91	55.319	ENSCSAG00000012574	R3HDM4	88	55.319	Chlorocebus_sabaeus
ENSHCOG00000008422	r3hdm4	99	59.470	ENSCPBG00000009805	R3HDM4	99	59.470	Chrysemys_picta_bellii
ENSHCOG00000008422	r3hdm4	91	55.319	ENSCANG00000040439	R3HDM4	82	55.319	Colobus_angolensis_palliatus
ENSHCOG00000008422	r3hdm4	91	55.696	ENSCGRG00001021650	R3hdm4	89	55.932	Cricetulus_griseus_chok1gshd
ENSHCOG00000008422	r3hdm4	91	55.696	ENSCGRG00000013169	R3hdm4	89	55.932	Cricetulus_griseus_crigri
ENSHCOG00000008422	r3hdm4	99	74.902	ENSCSEG00000018211	r3hdm4	99	74.902	Cynoglossus_semilaevis
ENSHCOG00000008422	r3hdm4	99	81.569	ENSCVAG00000017127	r3hdm4	99	81.569	Cyprinodon_variegatus
ENSHCOG00000008422	r3hdm4	90	55.085	ENSDORG00000006605	R3hdm4	96	55.085	Dipodomys_ordii
ENSHCOG00000008422	r3hdm4	91	55.932	ENSEASG00005021556	R3HDM4	86	55.932	Equus_asinus_asinus
ENSHCOG00000008422	r3hdm4	91	55.932	ENSECAG00000000003	R3HDM4	87	55.932	Equus_caballus
ENSHCOG00000008422	r3hdm4	91	55.085	ENSFCAG00000042437	R3HDM4	87	55.085	Felis_catus
ENSHCOG00000008422	r3hdm4	90	62.393	ENSFALG00000013938	R3HDM4	96	62.393	Ficedula_albicollis
ENSHCOG00000008422	r3hdm4	91	54.661	ENSFDAG00000017040	R3HDM4	96	54.661	Fukomys_damarensis
ENSHCOG00000008422	r3hdm4	99	80.392	ENSFHEG00000017636	r3hdm4	99	80.392	Fundulus_heteroclitus
ENSHCOG00000008422	r3hdm4	93	68.750	ENSGMOG00000001231	r3hdm4	99	69.583	Gadus_morhua
ENSHCOG00000008422	r3hdm4	90	61.441	ENSGALG00000001998	R3HDM4	89	61.441	Gallus_gallus
ENSHCOG00000008422	r3hdm4	99	79.608	ENSGAFG00000004173	r3hdm4	99	79.608	Gambusia_affinis
ENSHCOG00000008422	r3hdm4	99	58.712	ENSGAGG00000019698	R3HDM4	99	58.712	Gopherus_agassizii
ENSHCOG00000008422	r3hdm4	91	55.745	ENSGGOG00000008040	R3HDM4	96	55.745	Gorilla_gorilla
ENSHCOG00000008422	r3hdm4	99	83.529	ENSHBUG00000014810	r3hdm4	99	83.529	Haplochromis_burtoni
ENSHCOG00000008422	r3hdm4	91	54.468	ENSHGLG00000016194	R3HDM4	87	54.468	Heterocephalus_glaber_female
ENSHCOG00000008422	r3hdm4	99	66.279	ENSIPUG00000006716	r3hdm4	99	66.279	Ictalurus_punctatus
ENSHCOG00000008422	r3hdm4	91	53.191	ENSSTOG00000023015	R3HDM4	96	53.191	Ictidomys_tridecemlineatus
ENSHCOG00000008422	r3hdm4	90	55.319	ENSJJAG00000012475	R3hdm4	89	55.319	Jaculus_jaculus
ENSHCOG00000008422	r3hdm4	99	80.392	ENSKMAG00000005853	r3hdm4	99	80.392	Kryptolebias_marmoratus
ENSHCOG00000008422	r3hdm4	99	82.353	ENSLBEG00000000730	r3hdm4	99	82.353	Labrus_bergylta
ENSHCOG00000008422	r3hdm4	99	59.004	ENSLACG00000016445	R3HDM4	99	59.004	Latimeria_chalumnae
ENSHCOG00000008422	r3hdm4	99	64.615	ENSLOCG00000002423	r3hdm4	99	65.000	Lepisosteus_oculatus
ENSHCOG00000008422	r3hdm4	91	55.508	ENSLAFG00000017796	R3HDM4	91	55.508	Loxodonta_africana
ENSHCOG00000008422	r3hdm4	91	55.319	ENSMFAG00000044131	R3HDM4	88	55.319	Macaca_fascicularis
ENSHCOG00000008422	r3hdm4	85	57.014	ENSMMUG00000009682	R3HDM4	89	57.014	Macaca_mulatta
ENSHCOG00000008422	r3hdm4	91	55.319	ENSMNEG00000044115	R3HDM4	95	55.319	Macaca_nemestrina
ENSHCOG00000008422	r3hdm4	91	54.167	ENSMLEG00000035693	R3HDM4	89	54.167	Mandrillus_leucophaeus
ENSHCOG00000008422	r3hdm4	87	83.482	ENSMAMG00000005652	r3hdm4	91	83.482	Mastacembelus_armatus
ENSHCOG00000008422	r3hdm4	91	55.085	ENSMAUG00000010611	R3hdm4	91	55.085	Mesocricetus_auratus
ENSHCOG00000008422	r3hdm4	91	56.170	ENSMICG00000010124	R3HDM4	87	56.170	Microcebus_murinus
ENSHCOG00000008422	r3hdm4	91	54.894	ENSMOCG00000002646	R3hdm4	89	55.128	Microtus_ochrogaster
ENSHCOG00000008422	r3hdm4	99	81.961	ENSMMOG00000008253	r3hdm4	99	81.961	Mola_mola
ENSHCOG00000008422	r3hdm4	89	57.391	ENSMODG00000005698	R3HDM4	99	57.391	Monodelphis_domestica
ENSHCOG00000008422	r3hdm4	99	81.176	ENSMALG00000018856	r3hdm4	99	81.176	Monopterus_albus
ENSHCOG00000008422	r3hdm4	91	55.319	MGP_CAROLIEiJ_G0015551	R3hdm4	89	55.556	Mus_caroli
ENSHCOG00000008422	r3hdm4	91	55.128	ENSMUSG00000035781	R3hdm4	89	55.365	Mus_musculus
ENSHCOG00000008422	r3hdm4	91	54.468	MGP_PahariEiJ_G0030964	R3hdm4	89	54.701	Mus_pahari
ENSHCOG00000008422	r3hdm4	91	54.894	MGP_SPRETEiJ_G0016369	-	75	55.128	Mus_spretus
ENSHCOG00000008422	r3hdm4	91	55.508	ENSMPUG00000009394	R3HDM4	88	55.508	Mustela_putorius_furo
ENSHCOG00000008422	r3hdm4	99	82.745	ENSNBRG00000004438	r3hdm4	99	82.745	Neolamprologus_brichardi
ENSHCOG00000008422	r3hdm4	86	52.564	ENSNLEG00000001022	R3HDM4	99	52.564	Nomascus_leucogenys
ENSHCOG00000008422	r3hdm4	91	56.356	ENSMEUG00000011020	R3HDM4	98	56.356	Notamacropus_eugenii
ENSHCOG00000008422	r3hdm4	91	55.319	ENSODEG00000011745	R3HDM4	88	55.319	Octodon_degus
ENSHCOG00000008422	r3hdm4	99	83.922	ENSONIG00000012675	r3hdm4	92	83.922	Oreochromis_niloticus
ENSHCOG00000008422	r3hdm4	99	79.608	ENSOMEG00000003005	r3hdm4	99	79.608	Oryzias_melastigma
ENSHCOG00000008422	r3hdm4	91	54.894	ENSOGAG00000025656	R3HDM4	89	54.894	Otolemur_garnettii
ENSHCOG00000008422	r3hdm4	91	55.085	ENSOARG00000009945	R3HDM4	97	55.085	Ovis_aries
ENSHCOG00000008422	r3hdm4	91	55.745	ENSPPAG00000042371	R3HDM4	96	55.745	Pan_paniscus
ENSHCOG00000008422	r3hdm4	91	55.319	ENSPANG00000015203	R3HDM4	88	55.319	Papio_anubis
ENSHCOG00000008422	r3hdm4	99	62.835	ENSPKIG00000007421	r3hdm4	99	64.368	Paramormyrops_kingsleyae
ENSHCOG00000008422	r3hdm4	99	72.656	ENSPMGG00000020467	r3hdm4	99	72.656	Periophthalmus_magnuspinnatus
ENSHCOG00000008422	r3hdm4	91	57.265	ENSPEMG00000008365	Tmem259	97	57.265	Peromyscus_maniculatus_bairdii
ENSHCOG00000008422	r3hdm4	99	77.647	ENSPFOG00000003199	r3hdm4	99	77.647	Poecilia_formosa
ENSHCOG00000008422	r3hdm4	99	78.039	ENSPMEG00000014183	r3hdm4	99	78.039	Poecilia_mexicana
ENSHCOG00000008422	r3hdm4	99	78.039	ENSPREG00000010709	r3hdm4	99	78.039	Poecilia_reticulata
ENSHCOG00000008422	r3hdm4	91	55.745	ENSPPYG00000009297	R3HDM4	88	55.745	Pongo_abelii
ENSHCOG00000008422	r3hdm4	57	57.333	ENSPCAG00000010997	R3HDM4	55	57.333	Procavia_capensis
ENSHCOG00000008422	r3hdm4	91	56.170	ENSPCOG00000016785	R3HDM4	87	56.170	Propithecus_coquereli
ENSHCOG00000008422	r3hdm4	99	83.529	ENSPNYG00000017489	r3hdm4	99	83.529	Pundamilia_nyererei
ENSHCOG00000008422	r3hdm4	91	54.468	ENSRNOG00000011489	R3hdm4	89	54.701	Rattus_norvegicus
ENSHCOG00000008422	r3hdm4	91	55.319	ENSRROG00000028842	R3HDM4	88	55.319	Rhinopithecus_roxellana
ENSHCOG00000008422	r3hdm4	91	54.583	ENSSBOG00000019298	R3HDM4	70	54.583	Saimiri_boliviensis_boliviensis
ENSHCOG00000008422	r3hdm4	56	60.000	ENSSHAG00000003036	-	99	60.000	Sarcophilus_harrisii
ENSHCOG00000008422	r3hdm4	96	69.636	ENSSFOG00015020574	r3hdm4	91	69.758	Scleropages_formosus
ENSHCOG00000008422	r3hdm4	99	82.745	ENSSMAG00000021090	r3hdm4	74	82.745	Scophthalmus_maximus
ENSHCOG00000008422	r3hdm4	99	85.882	ENSSDUG00000008488	r3hdm4	99	85.882	Seriola_dumerili
ENSHCOG00000008422	r3hdm4	99	85.882	ENSSLDG00000025328	r3hdm4	99	85.882	Seriola_lalandi_dorsalis
ENSHCOG00000008422	r3hdm4	91	61.088	ENSSPUG00000005434	R3HDM4	93	61.088	Sphenodon_punctatus
ENSHCOG00000008422	r3hdm4	100	75.969	ENSSPAG00000002562	r3hdm4	100	75.969	Stegastes_partitus
ENSHCOG00000008422	r3hdm4	91	56.356	ENSSSCG00000013419	R3HDM4	87	56.356	Sus_scrofa
ENSHCOG00000008422	r3hdm4	78	52.294	ENSTGUG00000000663	R3HDM4	98	53.659	Taeniopygia_guttata
ENSHCOG00000008422	r3hdm4	91	55.983	ENSTTRG00000001470	R3HDM4	97	55.745	Tursiops_truncatus
ENSHCOG00000008422	r3hdm4	86	55.405	ENSUAMG00000005751	R3HDM4	99	55.405	Ursus_americanus
ENSHCOG00000008422	r3hdm4	91	55.085	ENSVVUG00000022685	R3HDM4	87	55.085	Vulpes_vulpes
ENSHCOG00000008422	r3hdm4	98	45.817	ENSXETG00000033624	R3HDM4	97	45.817	Xenopus_tropicalis
ENSHCOG00000008422	r3hdm4	99	76.953	ENSXCOG00000005127	r3hdm4	99	76.953	Xiphophorus_couchianus
ENSHCOG00000008422	r3hdm4	99	77.255	ENSXMAG00000022875	r3hdm4	99	77.255	Xiphophorus_maculatus