EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000008454 (Gene tree)
Gene ID: 109518497
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 68580 bases
Position: chrKV879711.1:656891-725470
Accession: 109518497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006586	Ribonuclease_3	PF00636.26	7e-43	1	2
ENSHCOP00000006586	Ribonuclease_3	PF00636.26	7e-43	2	2
ENSHCOP00000006586	dsrm	PF00035.26	9.5e-15	1	1
ENSHCOP00000006586	Ribonucleas_3_3	PF14622.6	1.1e-43	1	2
ENSHCOP00000006586	Ribonucleas_3_3	PF14622.6	1.1e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003417	-	3582	XM_019874362	ENSHCOP00000006586	1193 (aa)	XP_019729921	-

Gene Model

Click here to download ENSHCOG00000008454's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008454	drosha	99	80.017	ENSG00000113360	DROSHA	85	81.795	Homo_sapiens
ENSHCOG00000008454	drosha	99	77.932	ENSAMEG00000006000	DROSHA	86	79.198	Ailuropoda_melanoleuca
ENSHCOG00000008454	drosha	80	93.678	ENSACIG00000019308	drosha	95	93.011	Amphilophus_citrinellus
ENSHCOG00000008454	drosha	98	85.201	ENSATEG00000021939	drosha	86	86.022	Anabas_testudineus
ENSHCOG00000008454	drosha	96	80.789	ENSAPLG00000004372	DROSHA	86	80.453	Anas_platyrhynchos
ENSHCOG00000008454	drosha	97	78.943	ENSACAG00000007970	DROSHA	84	78.734	Anolis_carolinensis
ENSHCOG00000008454	drosha	99	76.891	ENSANAG00000020506	DROSHA	95	85.421	Aotus_nancymaae
ENSHCOG00000008454	drosha	95	88.014	ENSACLG00000012227	drosha	86	87.243	Astatotilapia_calliptera
ENSHCOG00000008454	drosha	97	83.520	ENSAMXG00000005582	drosha	86	83.003	Astyanax_mexicanus
ENSHCOG00000008454	drosha	96	82.220	ENSBTAG00000017551	DROSHA	86	80.920	Bos_taurus
ENSHCOG00000008454	drosha	72	36.332	WBGene00009163	drsh-1	75	36.655	Caenorhabditis_elegans
ENSHCOG00000008454	drosha	99	79.717	ENSCJAG00000018881	DROSHA	83	81.708	Callithrix_jacchus
ENSHCOG00000008454	drosha	52	95.177	ENSCAFG00000018939	-	99	95.177	Canis_familiaris
ENSHCOG00000008454	drosha	99	80.556	ENSCAFG00020017559	DROSHA	95	94.404	Canis_lupus_dingo
ENSHCOG00000008454	drosha	96	82.307	ENSCHIG00000022226	DROSHA	86	81.005	Capra_hircus
ENSHCOG00000008454	drosha	98	78.168	ENSCPOG00000015051	DROSHA	90	79.528	Cavia_porcellus
ENSHCOG00000008454	drosha	99	80.017	ENSCCAG00000027283	DROSHA	95	88.912	Cebus_capucinus
ENSHCOG00000008454	drosha	99	79.933	ENSCATG00000016833	DROSHA	95	87.577	Cercocebus_atys
ENSHCOG00000008454	drosha	99	80.017	ENSCLAG00000013048	DROSHA	85	81.670	Chinchilla_lanigera
ENSHCOG00000008454	drosha	99	79.967	ENSCSAG00000017202	DROSHA	82	81.708	Chlorocebus_sabaeus
ENSHCOG00000008454	drosha	67	73.041	ENSCHOG00000011786	DROSHA	63	73.041	Choloepus_hoffmanni
ENSHCOG00000008454	drosha	95	82.795	ENSCPBG00000000467	DROSHA	85	82.282	Chrysemys_picta_bellii
ENSHCOG00000008454	drosha	70	58.612	ENSCSAVG00000010638	-	99	59.330	Ciona_savignyi
ENSHCOG00000008454	drosha	99	79.967	ENSCANG00000035071	DROSHA	96	87.577	Colobus_angolensis_palliatus
ENSHCOG00000008454	drosha	97	76.948	ENSCGRG00001008885	Drosha	89	76.627	Cricetulus_griseus_chok1gshd
ENSHCOG00000008454	drosha	97	76.948	ENSCGRG00000006944	Drosha	89	76.627	Cricetulus_griseus_crigri
ENSHCOG00000008454	drosha	97	86.305	ENSCSEG00000001452	drosha	86	85.874	Cynoglossus_semilaevis
ENSHCOG00000008454	drosha	97	87.845	ENSCVAG00000004619	drosha	86	88.017	Cyprinodon_variegatus
ENSHCOG00000008454	drosha	97	84.749	ENSDARG00000055563	drosha	88	84.229	Danio_rerio
ENSHCOG00000008454	drosha	87	85.659	ENSDNOG00000001537	DROSHA	75	85.659	Dasypus_novemcinctus
ENSHCOG00000008454	drosha	97	80.240	ENSDORG00000005624	Drosha	87	79.812	Dipodomys_ordii
ENSHCOG00000008454	drosha	95	49.221	FBgn0026722	drosha	72	55.151	Drosophila_melanogaster
ENSHCOG00000008454	drosha	91	87.640	ENSETEG00000007814	DROSHA	77	87.734	Echinops_telfairi
ENSHCOG00000008454	drosha	57	81.498	ENSEBUG00000005974	-	98	82.292	Eptatretus_burgeri
ENSHCOG00000008454	drosha	99	80.504	ENSEASG00005007149	DROSHA	85	81.881	Equus_asinus_asinus
ENSHCOG00000008454	drosha	99	80.504	ENSECAG00000013578	DROSHA	83	81.881	Equus_caballus
ENSHCOG00000008454	drosha	87	80.943	ENSEEUG00000006351	DROSHA	74	81.809	Erinaceus_europaeus
ENSHCOG00000008454	drosha	94	81.042	ENSELUG00000015039	drosha	81	81.453	Esox_lucius
ENSHCOG00000008454	drosha	99	80.556	ENSFCAG00000000360	DROSHA	85	81.967	Felis_catus
ENSHCOG00000008454	drosha	96	79.578	ENSFALG00000012843	DROSHA	85	79.662	Ficedula_albicollis
ENSHCOG00000008454	drosha	99	80.017	ENSFDAG00000018414	DROSHA	85	81.670	Fukomys_damarensis
ENSHCOG00000008454	drosha	85	74.975	ENSFHEG00000003840	drosha	81	73.477	Fundulus_heteroclitus
ENSHCOG00000008454	drosha	96	83.247	ENSGALG00000012916	DROSHA	85	82.815	Gallus_gallus
ENSHCOG00000008454	drosha	95	87.258	ENSGAFG00000016853	drosha	87	86.615	Gambusia_affinis
ENSHCOG00000008454	drosha	95	82.969	ENSGAGG00000005621	DROSHA	85	82.195	Gopherus_agassizii
ENSHCOG00000008454	drosha	99	80.017	ENSGGOG00000011006	DROSHA	95	87.680	Gorilla_gorilla
ENSHCOG00000008454	drosha	92	83.015	ENSHBUG00000015907	drosha	85	82.652	Haplochromis_burtoni
ENSHCOG00000008454	drosha	99	80.050	ENSHGLG00000018873	DROSHA	84	81.670	Heterocephalus_glaber_female
ENSHCOG00000008454	drosha	99	80.017	ENSHGLG00100015793	DROSHA	83	81.670	Heterocephalus_glaber_male
ENSHCOG00000008454	drosha	97	81.002	ENSIPUG00000021202	drosha	87	81.121	Ictalurus_punctatus
ENSHCOG00000008454	drosha	82	86.151	ENSSTOG00000016323	DROSHA	99	94.590	Ictidomys_tridecemlineatus
ENSHCOG00000008454	drosha	99	77.977	ENSJJAG00000019758	Drosha	86	78.745	Jaculus_jaculus
ENSHCOG00000008454	drosha	81	93.196	ENSLBEG00000006606	drosha	85	83.677	Labrus_bergylta
ENSHCOG00000008454	drosha	96	83.290	ENSLACG00000005937	DROSHA	84	82.582	Latimeria_chalumnae
ENSHCOG00000008454	drosha	96	82.303	ENSLOCG00000012852	drosha	85	82.002	Lepisosteus_oculatus
ENSHCOG00000008454	drosha	99	77.588	ENSLAFG00000013831	DROSHA	95	78.965	Loxodonta_africana
ENSHCOG00000008454	drosha	99	79.717	ENSMFAG00000003055	DROSHA	85	80.225	Macaca_fascicularis
ENSHCOG00000008454	drosha	99	79.684	ENSMMUG00000012193	DROSHA	95	88.912	Macaca_mulatta
ENSHCOG00000008454	drosha	99	79.800	ENSMNEG00000037529	DROSHA	85	80.225	Macaca_nemestrina
ENSHCOG00000008454	drosha	99	74.231	ENSMLEG00000024167	DROSHA	84	76.100	Mandrillus_leucophaeus
ENSHCOG00000008454	drosha	97	88.003	ENSMAMG00000012613	drosha	95	91.984	Mastacembelus_armatus
ENSHCOG00000008454	drosha	95	88.014	ENSMZEG00005019487	drosha	86	87.243	Maylandia_zebra
ENSHCOG00000008454	drosha	96	82.815	ENSMGAG00000005087	DROSHA	85	82.383	Meleagris_gallopavo
ENSHCOG00000008454	drosha	96	80.000	ENSMAUG00000002863	Drosha	85	79.665	Mesocricetus_auratus
ENSHCOG00000008454	drosha	99	78.565	ENSMICG00000002241	DROSHA	95	84.467	Microcebus_murinus
ENSHCOG00000008454	drosha	95	80.407	ENSMOCG00000015044	Drosha	86	79.331	Microtus_ochrogaster
ENSHCOG00000008454	drosha	81	89.278	ENSMMOG00000004016	drosha	95	89.014	Mola_mola
ENSHCOG00000008454	drosha	96	79.932	ENSMODG00000004807	DROSHA	85	80.525	Monodelphis_domestica
ENSHCOG00000008454	drosha	95	88.742	ENSMALG00000010542	drosha	86	87.855	Monopterus_albus
ENSHCOG00000008454	drosha	97	75.441	MGP_CAROLIEiJ_G0019687	Drosha	93	89.884	Mus_caroli
ENSHCOG00000008454	drosha	95	79.576	ENSMUSG00000022191	Drosha	87	76.778	Mus_musculus
ENSHCOG00000008454	drosha	97	75.726	MGP_PahariEiJ_G0016063	Drosha	93	89.884	Mus_pahari
ENSHCOG00000008454	drosha	97	76.565	MGP_SPRETEiJ_G0020580	Drosha	93	89.884	Mus_spretus
ENSHCOG00000008454	drosha	99	77.642	ENSMPUG00000015237	DROSHA	85	79.264	Mustela_putorius_furo
ENSHCOG00000008454	drosha	99	76.799	ENSMLUG00000002581	DROSHA	86	77.796	Myotis_lucifugus
ENSHCOG00000008454	drosha	95	74.446	ENSNGAG00000017329	Drosha	84	94.258	Nannospalax_galili
ENSHCOG00000008454	drosha	83	75.052	ENSNBRG00000001870	drosha	99	75.025	Neolamprologus_brichardi
ENSHCOG00000008454	drosha	99	77.177	ENSNLEG00000013963	DROSHA	95	87.577	Nomascus_leucogenys
ENSHCOG00000008454	drosha	76	73.090	ENSMEUG00000002029	DROSHA	68	73.090	Notamacropus_eugenii
ENSHCOG00000008454	drosha	82	83.985	ENSOPRG00000010845	DROSHA	73	83.414	Ochotona_princeps
ENSHCOG00000008454	drosha	99	77.524	ENSODEG00000001911	DROSHA	86	78.025	Octodon_degus
ENSHCOG00000008454	drosha	95	84.661	ENSONIG00000006578	drosha	86	84.219	Oreochromis_niloticus
ENSHCOG00000008454	drosha	64	75.734	ENSOANG00000015744	-	100	75.734	Ornithorhynchus_anatinus
ENSHCOG00000008454	drosha	98	80.776	ENSOCUG00000000367	DROSHA	84	81.021	Oryctolagus_cuniculus
ENSHCOG00000008454	drosha	97	86.219	ENSORLG00000013592	drosha	87	86.994	Oryzias_latipes
ENSHCOG00000008454	drosha	82	92.237	ENSORLG00020002854	drosha	96	92.237	Oryzias_latipes_hni
ENSHCOG00000008454	drosha	82	93.149	ENSORLG00015003156	drosha	95	93.149	Oryzias_latipes_hsok
ENSHCOG00000008454	drosha	97	85.530	ENSOMEG00000001062	drosha	87	86.563	Oryzias_melastigma
ENSHCOG00000008454	drosha	99	76.221	ENSOGAG00000005424	DROSHA	95	77.444	Otolemur_garnettii
ENSHCOG00000008454	drosha	99	80.050	ENSPPAG00000037526	DROSHA	95	86.756	Pan_paniscus
ENSHCOG00000008454	drosha	99	80.556	ENSPPRG00000002687	DROSHA	85	81.967	Panthera_pardus
ENSHCOG00000008454	drosha	99	80.556	ENSPTIG00000017523	DROSHA	85	81.967	Panthera_tigris_altaica
ENSHCOG00000008454	drosha	99	80.017	ENSPTRG00000016762	DROSHA	85	81.795	Pan_troglodytes
ENSHCOG00000008454	drosha	99	79.967	ENSPANG00000003027	DROSHA	85	80.225	Papio_anubis
ENSHCOG00000008454	drosha	97	84.310	ENSPKIG00000011514	drosha	86	84.052	Paramormyrops_kingsleyae
ENSHCOG00000008454	drosha	95	80.593	ENSPEMG00000000607	Drosha	84	79.983	Peromyscus_maniculatus_bairdii
ENSHCOG00000008454	drosha	96	81.606	ENSPCIG00000006010	DROSHA	84	82.211	Phascolarctos_cinereus
ENSHCOG00000008454	drosha	95	87.687	ENSPREG00000022302	drosha	88	86.799	Poecilia_reticulata
ENSHCOG00000008454	drosha	99	77.453	ENSPPYG00000015370	DROSHA	85	79.097	Pongo_abelii
ENSHCOG00000008454	drosha	99	62.990	ENSPCAG00000007190	DROSHA	85	64.017	Procavia_capensis
ENSHCOG00000008454	drosha	99	76.923	ENSPCOG00000028511	DROSHA	95	85.010	Propithecus_coquereli
ENSHCOG00000008454	drosha	99	73.295	ENSPVAG00000013167	DROSHA	85	74.749	Pteropus_vampyrus
ENSHCOG00000008454	drosha	95	88.014	ENSPNYG00000000398	drosha	96	91.786	Pundamilia_nyererei
ENSHCOG00000008454	drosha	81	91.925	ENSPNAG00000011876	drosha	86	87.819	Pygocentrus_nattereri
ENSHCOG00000008454	drosha	95	78.638	ENSRNOG00000013451	Drosha	85	79.431	Rattus_norvegicus
ENSHCOG00000008454	drosha	99	78.816	ENSRBIG00000032786	DROSHA	95	85.318	Rhinopithecus_bieti
ENSHCOG00000008454	drosha	99	79.967	ENSRROG00000028199	DROSHA	83	81.708	Rhinopithecus_roxellana
ENSHCOG00000008454	drosha	99	79.716	ENSSBOG00000024008	DROSHA	95	87.064	Saimiri_boliviensis_boliviensis
ENSHCOG00000008454	drosha	96	79.932	ENSSHAG00000015198	DROSHA	97	86.673	Sarcophilus_harrisii
ENSHCOG00000008454	drosha	98	83.719	ENSSFOG00015009776	drosha	90	83.579	Scleropages_formosus
ENSHCOG00000008454	drosha	95	86.696	ENSSMAG00000008069	drosha	85	87.077	Scophthalmus_maximus
ENSHCOG00000008454	drosha	97	86.763	ENSSDUG00000010944	drosha	95	93.326	Seriola_dumerili
ENSHCOG00000008454	drosha	97	86.912	ENSSLDG00000025271	drosha	95	93.224	Seriola_lalandi_dorsalis
ENSHCOG00000008454	drosha	80	68.614	ENSSARG00000004436	-	68	68.614	Sorex_araneus
ENSHCOG00000008454	drosha	95	78.659	ENSSPUG00000006902	DROSHA	84	78.448	Sphenodon_punctatus
ENSHCOG00000008454	drosha	96	82.140	ENSSSCG00000016809	DROSHA	85	81.810	Sus_scrofa
ENSHCOG00000008454	drosha	96	78.961	ENSTGUG00000001955	DROSHA	86	78.625	Taeniopygia_guttata
ENSHCOG00000008454	drosha	89	83.551	ENSTRUG00000017778	drosha	83	84.206	Takifugu_rubripes
ENSHCOG00000008454	drosha	97	84.874	ENSTNIG00000008688	drosha	95	92.426	Tetraodon_nigroviridis
ENSHCOG00000008454	drosha	83	77.410	ENSTBEG00000000537	DROSHA	73	77.410	Tupaia_belangeri
ENSHCOG00000008454	drosha	96	79.515	ENSTTRG00000004210	DROSHA	85	79.264	Tursiops_truncatus
ENSHCOG00000008454	drosha	99	80.387	ENSUAMG00000025257	DROSHA	85	81.795	Ursus_americanus
ENSHCOG00000008454	drosha	99	80.084	ENSUMAG00000014097	DROSHA	94	94.256	Ursus_maritimus
ENSHCOG00000008454	drosha	91	75.022	ENSVPAG00000011260	DROSHA	100	76.157	Vicugna_pacos
ENSHCOG00000008454	drosha	99	80.556	ENSVVUG00000022212	DROSHA	98	94.126	Vulpes_vulpes
ENSHCOG00000008454	drosha	95	77.138	ENSXETG00000016701	drosha	84	77.181	Xenopus_tropicalis