EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000008468 (Gene tree)
Gene ID
109516344
Gene Symbol
-
Alias
-
Full Name
elongation factor 1-alpha
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
3424 bases
Position
chrKV879956.1:249733-253156
Accession
109516344
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000021554GTP_EFTUPF00009.271.3e-5311
ENSHCOP00000021554GTP_EFTU_D2PF03144.253.7e-1511
ENSHCOP00000021554GTP_EFTU_D3PF03143.171.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000003327-2163XM_019870819ENSHCOP00000021554461 (aa)XP_019726378UPI00094E8B49
Gene Model
Click here to download ENSHCOG00000008468's gene model file
Pathways
Pathway IDPathway NameSource
hcq03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008468's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000008468-9985.900ENSHCOG00000008489-9786.161
ENSHCOG00000008468-9666.290ENSHCOG00000001215si:dkey-37o8.19866.290
ENSHCOG00000008468-9638.565ENSHCOG00000016899gspt1l7438.565
ENSHCOG00000008468-9540.183ENSHCOG00000007581hbs1l5840.183
ENSHCOG00000008468-9630.531ENSHCOG00000014418tufm9030.531
ENSHCOG00000008468-9637.668ENSHCOG00000015286GSPT17437.668
ENSHCOG00000008468-10086.580ENSHCOG00000014718eef1a1b9887.168
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000008468-9892.905ENSAPOG00000004714-9892.905Acanthochromis_polyacanthus
ENSHCOG00000008468-9094.189ENSACIG00000001219-9794.293Amphilophus_citrinellus
ENSHCOG00000008468-8795.533ENSAOCG00000022002-9895.533Amphiprion_ocellaris
ENSHCOG00000008468-10090.456ENSAOCG00000022039-9890.909Amphiprion_ocellaris
ENSHCOG00000008468-10090.672ENSAPEG00000016361-9891.131Amphiprion_percula
ENSHCOG00000008468-10096.529ENSATEG00000003244-9796.529Anabas_testudineus
ENSHCOG00000008468-10094.143ENSACLG00000022560-9894.235Astatotilapia_calliptera
ENSHCOG00000008468-10082.251WBGene00001169eef-1A.29882.743Caenorhabditis_elegans
ENSHCOG00000008468-10082.251WBGene00001168eef-1A.19882.743Caenorhabditis_elegans
ENSHCOG00000008468-9881.057ENSCING00000018894-9781.057Ciona_intestinalis
ENSHCOG00000008468-9984.061ENSCING00000021478-9884.633Ciona_intestinalis
ENSHCOG00000008468-10077.468ENSCING00000007703-9777.632Ciona_intestinalis
ENSHCOG00000008468-9880.879ENSCING00000005126-9880.879Ciona_intestinalis
ENSHCOG00000008468-9781.678ENSCSAVG00000003196-9781.678Ciona_savignyi
ENSHCOG00000008468-9781.818ENSCSAVG00000009663-9781.818Ciona_savignyi
ENSHCOG00000008468-9976.211ENSCSAVG00000001085-8977.324Ciona_savignyi
ENSHCOG00000008468-9984.026ENSCSAVG00000006357-9692.667Ciona_savignyi
ENSHCOG00000008468-9893.570ENSCSEG00000008011-9893.570Cynoglossus_semilaevis
ENSHCOG00000008468-9085.749ENSCSEG00000007972-9886.139Cynoglossus_semilaevis
ENSHCOG00000008468-8984.951ENSCSEG00000007992-9785.112Cynoglossus_semilaevis
ENSHCOG00000008468-9895.787ENSCVAG00000019356-9895.787Cyprinodon_variegatus
ENSHCOG00000008468-9884.735FBgn0000557eEF1alpha29884.735Drosophila_melanogaster
ENSHCOG00000008468-10085.498FBgn0284245eEF1alpha19785.938Drosophila_melanogaster
ENSHCOG00000008468-9983.043ENSEBUG00000015814-9883.592Eptatretus_burgeri
ENSHCOG00000008468-9895.565ENSFHEG00000015054-9895.565Fundulus_heteroclitus
ENSHCOG00000008468-9895.344ENSGAFG00000014646-9895.344Gambusia_affinis
ENSHCOG00000008468-10092.842ENSGACG00000002143-9893.126Gasterosteus_aculeatus
ENSHCOG00000008468-9894.900ENSGACG00000002182-9894.900Gasterosteus_aculeatus
ENSHCOG00000008468-5591.667ENSHBUG00000017166-9191.736Haplochromis_burtoni
ENSHCOG00000008468-9984.565ENSLBEG00000002955-9884.701Labrus_bergylta
ENSHCOG00000008468-9895.122ENSLBEG00000002759-9895.122Labrus_bergylta
ENSHCOG00000008468-9895.787ENSMAMG00000007715-9895.787Mastacembelus_armatus
ENSHCOG00000008468-9894.235ENSMMOG00000001165-9894.235Mola_mola
ENSHCOG00000008468-9976.535ENSMMOG00000018160-9585.870Mola_mola
ENSHCOG00000008468-9986.087ENSMMOG00000001106-9886.475Mola_mola
ENSHCOG00000008468-10084.165ENSNBRG00000017346-9784.035Neolamprologus_brichardi
ENSHCOG00000008468-7692.045ENSONIG00000017760-9892.045Oreochromis_niloticus
ENSHCOG00000008468-9894.457ENSORLG00000007614eef1a9894.457Oryzias_latipes
ENSHCOG00000008468-10093.305ENSORLG00015002397-9894.678Oryzias_latipes_hsok
ENSHCOG00000008468-9895.344ENSOMEG00000018226-9895.344Oryzias_melastigma
ENSHCOG00000008468-9894.690ENSPMGG00000023911-9994.678Periophthalmus_magnuspinnatus
ENSHCOG00000008468-9548.970ENSPMGG00000022427-9760.000Periophthalmus_magnuspinnatus
ENSHCOG00000008468-9895.344ENSPFOG00000003924-9895.285Poecilia_formosa
ENSHCOG00000008468-9895.344ENSPLAG00000004316-9895.344Poecilia_latipinna
ENSHCOG00000008468-9895.565ENSPMEG00000001010-9895.565Poecilia_mexicana
ENSHCOG00000008468-10093.939ENSPREG00000008243-9895.122Poecilia_reticulata
ENSHCOG00000008468-10094.143ENSPNYG00000007263-9894.235Pundamilia_nyererei
ENSHCOG00000008468-9780.000YBR118WTEF29879.379Saccharomyces_cerevisiae
ENSHCOG00000008468-9780.000YPR080WTEF19879.379Saccharomyces_cerevisiae
ENSHCOG00000008468-5393.443ENSSMAG00000016277-9693.443Scophthalmus_maximus
ENSHCOG00000008468-9882.664ENSSMAG00000018469-9882.664Scophthalmus_maximus
ENSHCOG00000008468-9894.900ENSSDUG00000008198-9894.900Seriola_dumerili
ENSHCOG00000008468-9892.018ENSSPAG00000001710-9892.018Stegastes_partitus
ENSHCOG00000008468-9894.457ENSTRUG00000005727ef-1a9894.457Takifugu_rubripes
ENSHCOG00000008468-9985.870ENSTRUG00000005066-9886.253Takifugu_rubripes
ENSHCOG00000008468-9894.900ENSTNIG00000002619-9894.900Tetraodon_nigroviridis
ENSHCOG00000008468-9981.957ENSTNIG00000002617-9483.556Tetraodon_nigroviridis
ENSHCOG00000008468-9895.344ENSXCOG00000001542-10096.512Xiphophorus_couchianus

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