EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008489 (Gene tree)
Gene ID: 109516345
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4233 bases
Position: chrKV879956.1:245046-249278
Accession: 109516345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006653	GTP_EFTU	PF00009.27	1.1e-53	1	1
ENSHCOP00000006653	GTP_EFTU_D2	PF03144.25	6.4e-14	1	1
ENSHCOP00000006653	GTP_EFTU_D3	PF03143.17	3.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003317	-	1791	XM_019870820	ENSHCOP00000006653	461 (aa)	XP_019726379	UPI00094E472B

Gene Model

Click here to download ENSHCOG00000008489's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008489	-	99	85.217	ENSHCOG00000014718	eef1a1b	99	85.217
ENSHCOG00000008489	-	95	30.134	ENSHCOG00000014418	tufm	90	30.134
ENSHCOG00000008489	-	95	36.878	ENSHCOG00000015286	GSPT1	73	36.878
ENSHCOG00000008489	-	94	39.359	ENSHCOG00000007581	hbs1l	57	39.359
ENSHCOG00000008489	-	96	65.011	ENSHCOG00000001215	si:dkey-37o8.1	98	65.011
ENSHCOG00000008489	-	97	86.161	ENSHCOG00000008468	-	99	85.900
ENSHCOG00000008489	-	95	37.783	ENSHCOG00000016899	gspt1l	74	37.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008489	-	96	83.258	ENSAPOG00000004714	-	99	82.213	Acanthochromis_polyacanthus
ENSHCOG00000008489	-	89	85.437	ENSACIG00000001219	-	99	85.437	Amphilophus_citrinellus
ENSHCOG00000008489	-	85	86.041	ENSAOCG00000022002	-	99	84.746	Amphiprion_ocellaris
ENSHCOG00000008489	-	100	85.466	ENSAOCG00000022039	-	99	85.466	Amphiprion_ocellaris
ENSHCOG00000008489	-	100	85.249	ENSAPEG00000016361	-	99	85.249	Amphiprion_percula
ENSHCOG00000008489	-	97	85.938	ENSATEG00000003244	-	97	85.683	Anabas_testudineus
ENSHCOG00000008489	-	99	86.087	ENSACLG00000022560	-	99	86.087	Astatotilapia_calliptera
ENSHCOG00000008489	-	100	79.610	WBGene00001168	eef-1A.1	99	79.610	Caenorhabditis_elegans
ENSHCOG00000008489	-	100	79.610	WBGene00001169	eef-1A.2	99	79.610	Caenorhabditis_elegans
ENSHCOG00000008489	-	99	80.828	ENSCING00000021478	-	99	80.828	Ciona_intestinalis
ENSHCOG00000008489	-	100	79.785	ENSCING00000007703	-	99	79.785	Ciona_intestinalis
ENSHCOG00000008489	-	97	79.867	ENSCING00000005126	-	99	79.785	Ciona_intestinalis
ENSHCOG00000008489	-	98	80.837	ENSCING00000018894	-	99	80.994	Ciona_intestinalis
ENSHCOG00000008489	-	99	81.441	ENSCSAVG00000006357	-	98	92.000	Ciona_savignyi
ENSHCOG00000008489	-	99	77.582	ENSCSAVG00000001085	-	90	77.582	Ciona_savignyi
ENSHCOG00000008489	-	97	80.044	ENSCSAVG00000009663	-	99	80.217	Ciona_savignyi
ENSHCOG00000008489	-	98	79.085	ENSCSAVG00000003196	-	99	79.274	Ciona_savignyi
ENSHCOG00000008489	-	90	82.082	ENSCSEG00000007992	-	99	82.082	Cynoglossus_semilaevis
ENSHCOG00000008489	-	90	82.324	ENSCSEG00000007972	-	99	82.324	Cynoglossus_semilaevis
ENSHCOG00000008489	-	97	85.491	ENSCSEG00000008011	-	99	85.033	Cynoglossus_semilaevis
ENSHCOG00000008489	-	97	85.045	ENSCVAG00000019356	-	99	84.816	Cyprinodon_variegatus
ENSHCOG00000008489	-	99	83.913	FBgn0284245	eEF1alpha1	99	83.913	Drosophila_melanogaster
ENSHCOG00000008489	-	98	83.186	FBgn0000557	eEF1alpha2	99	83.297	Drosophila_melanogaster
ENSHCOG00000008489	-	100	81.345	ENSEBUG00000015814	-	100	81.345	Eptatretus_burgeri
ENSHCOG00000008489	-	100	86.117	ENSFHEG00000015054	-	99	86.117	Fundulus_heteroclitus
ENSHCOG00000008489	-	97	85.491	ENSGAFG00000014646	-	99	85.249	Gambusia_affinis
ENSHCOG00000008489	-	96	85.973	ENSGACG00000002182	-	99	84.816	Gasterosteus_aculeatus
ENSHCOG00000008489	-	100	84.165	ENSGACG00000002143	-	99	84.165	Gasterosteus_aculeatus
ENSHCOG00000008489	-	55	80.952	ENSHBUG00000017166	-	94	80.952	Haplochromis_burtoni
ENSHCOG00000008489	-	100	84.816	ENSLBEG00000002955	-	100	84.816	Labrus_bergylta
ENSHCOG00000008489	-	97	85.045	ENSLBEG00000002759	-	99	84.816	Labrus_bergylta
ENSHCOG00000008489	-	97	86.161	ENSMAMG00000007715	-	99	85.900	Mastacembelus_armatus
ENSHCOG00000008489	-	100	83.514	ENSMMOG00000001106	-	99	83.514	Mola_mola
ENSHCOG00000008489	-	97	85.938	ENSMMOG00000001165	-	99	90.909	Mola_mola
ENSHCOG00000008489	-	100	75.705	ENSMMOG00000018160	-	99	85.870	Mola_mola
ENSHCOG00000008489	-	99	75.870	ENSNBRG00000017346	-	99	75.870	Neolamprologus_brichardi
ENSHCOG00000008489	-	76	86.364	ENSONIG00000017760	-	98	86.364	Oreochromis_niloticus
ENSHCOG00000008489	-	96	86.652	ENSORLG00000007614	eef1a	99	85.466	Oryzias_latipes
ENSHCOG00000008489	-	100	86.551	ENSORLG00015002397	-	99	86.551	Oryzias_latipes_hsok
ENSHCOG00000008489	-	97	85.491	ENSOMEG00000018226	-	99	85.249	Oryzias_melastigma
ENSHCOG00000008489	-	94	48.961	ENSPMGG00000022427	-	97	62.500	Periophthalmus_magnuspinnatus
ENSHCOG00000008489	-	98	86.283	ENSPMGG00000023911	-	99	94.186	Periophthalmus_magnuspinnatus
ENSHCOG00000008489	-	97	85.268	ENSPFOG00000003924	-	99	85.033	Poecilia_formosa
ENSHCOG00000008489	-	97	85.268	ENSPLAG00000004316	-	99	85.033	Poecilia_latipinna
ENSHCOG00000008489	-	97	85.268	ENSPMEG00000001010	-	99	85.033	Poecilia_mexicana
ENSHCOG00000008489	-	100	86.551	ENSPREG00000008243	-	99	86.551	Poecilia_reticulata
ENSHCOG00000008489	-	99	86.087	ENSPNYG00000007263	-	99	86.087	Pundamilia_nyererei
ENSHCOG00000008489	-	96	78.555	YBR118W	TEF2	100	77.874	Saccharomyces_cerevisiae
ENSHCOG00000008489	-	96	78.555	YPR080W	TEF1	100	77.874	Saccharomyces_cerevisiae
ENSHCOG00000008489	-	51	82.128	ENSSMAG00000016277	-	99	80.315	Scophthalmus_maximus
ENSHCOG00000008489	-	96	78.233	ENSSMAG00000018469	-	99	77.433	Scophthalmus_maximus
ENSHCOG00000008489	-	96	85.520	ENSSDUG00000008198	-	99	84.382	Seriola_dumerili
ENSHCOG00000008489	-	96	84.615	ENSSPAG00000001710	-	99	83.514	Stegastes_partitus
ENSHCOG00000008489	-	100	84.599	ENSTRUG00000005066	-	99	84.599	Takifugu_rubripes
ENSHCOG00000008489	-	97	85.938	ENSTRUG00000005727	ef-1a	99	85.683	Takifugu_rubripes
ENSHCOG00000008489	-	97	83.036	ENSTNIG00000002617	-	94	83.036	Tetraodon_nigroviridis
ENSHCOG00000008489	-	96	87.330	ENSTNIG00000002619	-	99	86.117	Tetraodon_nigroviridis
ENSHCOG00000008489	-	99	83.913	ENSXCOG00000001542	-	99	93.023	Xiphophorus_couchianus